RNA–Protein interactions for RNA: ENST00000512845.5

PRDM5-210, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 1,249 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-210ENST00000512845 SSBP4Q9BWG4 385 aaPredicted RBP13.12□□□□□ -0.31
PRDM5-210ENST00000512845 SNAI2O43623 268 aa13.11□□□□□ -0.31
PRDM5-210ENST00000512845 RPS20P60866 119 aaKnown RBP13.11□□□□□ -0.31
PRDM5-210ENST00000512845 LELP1Q5T871 98 aa13.11□□□□□ -0.31
PRDM5-210ENST00000512845 WFDC10BQ8IUB3 73 aa13.11□□□□□ -0.31
PRDM5-210ENST00000512845 JPT2Q9H910 190 aa13.11□□□□□ -0.31
PRDM5-210ENST00000512845 IGHV3-38A0A0C4DH36 116 aa13.1□□□□□ -0.31
PRDM5-210ENST00000512845 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
PRDM5-210ENST00000512845 Q6ZSN1 163 aa13.1□□□□□ -0.31
PRDM5-210ENST00000512845 SAMD10Q9BYL1 202 aa13.1□□□□□ -0.31
PRDM5-210ENST00000512845 A0A087WWC5 75 aa13.09□□□□□ -0.31
PRDM5-210ENST00000512845 TRBV10-1A0A0K0K1A3 114 aa13.09□□□□□ -0.31
PRDM5-210ENST00000512845 XKRY2A2RUG3 117 aa13.09□□□□□ -0.31
PRDM5-210ENST00000512845 CRYGDP07320 174 aa13.09□□□□□ -0.31
PRDM5-210ENST00000512845 RPL19P84098 196 aaKnown RBP13.09□□□□□ -0.31
PRDM5-210ENST00000512845 LINC01556Q5JQF7 62 aa13.09□□□□□ -0.31
PRDM5-210ENST00000512845 OR10J3Q5JRS4 329 aa13.09□□□□□ -0.31
PRDM5-210ENST00000512845 ALKAL2Q6UX46 152 aa13.09□□□□□ -0.31
PRDM5-210ENST00000512845 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.32
PRDM5-210ENST00000512845 MSRB1Q9NZV6 116 aa13.08□□□□□ -0.32
PRDM5-210ENST00000512845 A0A087WWL8 130 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 RAB19A4D1S5 217 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 GAGE12JA6NER3 117 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 IGLV2-8P01709 118 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 LINC00694P0DN24 101 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 GAGE1Q13065 139 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 GAGE4Q13068 117 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 GAGE5Q13069 117 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 GAGE13Q4V321 117 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 OR10AG1Q8NH19 301 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 LYPD6BQ8NI32 183 aa13.07□□□□□ -0.32
PRDM5-210ENST00000512845 TMEM250H0YL14 139 aa13.06□□□□□ -0.32
PRDM5-210ENST00000512845 RAB4BP61018 213 aa13.06□□□□□ -0.32
PRDM5-210ENST00000512845 Q6ZRN7 208 aaPredicted RBP13.06□□□□□ -0.32
PRDM5-210ENST00000512845 C14orf178Q8N769 122 aaPredicted RBP13.06□□□□□ -0.32
PRDM5-210ENST00000512845 C19orf71A6NCJ1 209 aa13.05□□□□□ -0.32
PRDM5-210ENST00000512845 EREGO14944 169 aa13.05□□□□□ -0.32
PRDM5-210ENST00000512845 P01737 135 aa13.05□□□□□ -0.32
PRDM5-210ENST00000512845 RPL36AP83881 106 aaKnown RBP13.05□□□□□ -0.32
PRDM5-210ENST00000512845 OR2D3Q8NGH3 330 aa13.05□□□□□ -0.32
PRDM5-210ENST00000512845 RPL36ALQ969Q0 106 aaKnown RBP13.05□□□□□ -0.32
PRDM5-210ENST00000512845 RBFOX3A6NFN3 312 aa13.04□□□□□ -0.32
PRDM5-210ENST00000512845 F2Z2F3 143 aa13.04□□□□□ -0.32
PRDM5-210ENST00000512845 NDUFS6O75380 124 aaKnown RBP13.04□□□□□ -0.32
PRDM5-210ENST00000512845 TRBV20OR9-2A0A075B6H5 130 aa13.03□□□□□ -0.32
PRDM5-210ENST00000512845 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
PRDM5-210ENST00000512845 SMIM17P0DL12 118 aa13.03□□□□□ -0.32
PRDM5-210ENST00000512845 ERVFC1-1P60608 527 aa13.03□□□□□ -0.32
PRDM5-210ENST00000512845 FER1L6-AS1Q8NA97 138 aa13.03□□□□□ -0.32
PRDM5-210ENST00000512845 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
PRDM5-210ENST00000512845 TRBV7-3A0A075B6L6 115 aa13.02□□□□□ -0.33
PRDM5-210ENST00000512845 C16orf90A8MZG2 172 aa13.02□□□□□ -0.33
PRDM5-210ENST00000512845 IBA57-AS1B1ANH7 110 aa13.02□□□□□ -0.33
PRDM5-210ENST00000512845 IGLC6P0CF74 106 aa13.02□□□□□ -0.33
PRDM5-210ENST00000512845 CACNG7P62955 275 aa13.02□□□□□ -0.33
PRDM5-210ENST00000512845 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.02□□□□□ -0.33
PRDM5-210ENST00000512845 OR10G8Q8NGN5 311 aa13.02□□□□□ -0.33
PRDM5-210ENST00000512845 NKX2-5P52952 324 aaPredicted RBP13.01□□□□□ -0.33
PRDM5-210ENST00000512845 LAGE3Q14657 143 aa13.01□□□□□ -0.33
PRDM5-210ENST00000512845 ZNF56Q15929 161 aa13.01□□□□□ -0.33
PRDM5-210ENST00000512845 LRP1BQ9NZR2 4599 aa13.01□□□□□ -0.33
PRDM5-210ENST00000512845 SPATA12Q7Z6I5 190 aa13□□□□□ -0.33
PRDM5-210ENST00000512845 RYR1P21817 5038 aa12.99□□□□□ -0.33
PRDM5-210ENST00000512845 F5H697 171 aa12.99□□□□□ -0.33
PRDM5-210ENST00000512845 WDR73Q6P4I2 378 aa12.99□□□□□ -0.33
PRDM5-210ENST00000512845 PGPEP1Q9NXJ5 209 aa12.99□□□□□ -0.33
PRDM5-210ENST00000512845 Q9UF83 564 aa12.99□□□□□ -0.33
PRDM5-210ENST00000512845 TNFRSF18Q9Y5U5 241 aa12.99□□□□□ -0.33
PRDM5-210ENST00000512845 UBE2D3P61077 147 aa12.98□□□□□ -0.33
PRDM5-210ENST00000512845 UBE2D2P62837 147 aa12.98□□□□□ -0.33
PRDM5-210ENST00000512845 TOR2AQ5JU69 321 aa12.98□□□□□ -0.33
PRDM5-210ENST00000512845 NUDT10Q8NFP7 164 aa12.98□□□□□ -0.33
PRDM5-210ENST00000512845 OCC1Q8TAD7 63 aa12.98□□□□□ -0.33
PRDM5-210ENST00000512845 NUDT11Q96G61 164 aa12.98□□□□□ -0.33
PRDM5-210ENST00000512845 TPPP3Q9BW30 176 aa12.98□□□□□ -0.33
PRDM5-210ENST00000512845 EIF5A2Q9GZV4 153 aaKnown RBP12.98□□□□□ -0.33
PRDM5-210ENST00000512845 URGCP-MRPS24S4R325 110 aa12.98□□□□□ -0.33
PRDM5-210ENST00000512845 MUC21A0A0G2JKD1 596 aa12.97□□□□□ -0.33
PRDM5-210ENST00000512845 MUC21A0A140T8X8 626 aa12.97□□□□□ -0.33
PRDM5-210ENST00000512845 H7C1H1 209 aa12.97□□□□□ -0.33
PRDM5-210ENST00000512845 TRGC1P0CF51 173 aa12.97□□□□□ -0.33
PRDM5-210ENST00000512845 GZMBP10144 247 aa12.97□□□□□ -0.33
PRDM5-210ENST00000512845 CHCHD7Q9BUK0 85 aa12.97□□□□□ -0.33
PRDM5-210ENST00000512845 KIF25-AS1Q9Y6Z4 181 aa12.97□□□□□ -0.33
PRDM5-210ENST00000512845 TRAV8-3A0A0A6YYJ7 113 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 PSCAO43653 123 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 IGHV3-30P01768 117 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 IGHV3-33P01772 117 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 IGHV3-30-3P0DP02 117 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 TMEM97Q5BJF2 176 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 CDPF1Q6NVV7 123 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 FAM210AQ96ND0 272 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
PRDM5-210ENST00000512845 RPP21Q9H633 154 aaKnown RBP12.96□□□□□ -0.33
PRDM5-210ENST00000512845 A0A087WTM6 91 aa12.95□□□□□ -0.34
PRDM5-210ENST00000512845 SSTP61278 116 aa12.95□□□□□ -0.34
PRDM5-210ENST00000512845 KCNIP4Q6PIL6 250 aa12.95□□□□□ -0.34
PRDM5-210ENST00000512845 NEXN-AS1Q8NBZ9 246 aa12.95□□□□□ -0.34
PRDM5-210ENST00000512845 DNAH5Q8TE73 4624 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms