RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PTRHD1Q6GMV3 140 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 UNQ5815/PRO19632Q6UWF5 114 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 COX6B2Q6YFQ2 88 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 OR5H6Q8NGV6 325 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 DGCR14Q96DF8 476 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 DMAC1Q96GE9 116 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 TMEM141Q96I45 108 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 PBDC1Q9BVG4 233 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 RTL8AQ9BWD3 113 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 OR2H1Q9GZK4 316 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 ATG5Q9H1Y0 275 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 FKBP11Q9NYL4 201 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 SSR3Q9UNL2 185 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 TRPM1Q7Z4N2 1603 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 NCAPD3P42695 1498 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 NISCHQ9Y2I1 1504 aa-0.43□□□□□ -2.48
PDGFC-208ENST00000512711 PLXNA2O75051 1894 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 RTL9Q8NET4 1388 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 HELZP42694 1942 aaKnown RBP-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 CD109Q6YHK3 1445 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 MYH9P35579 1960 aaKnown RBP-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 SPAARA0A1B0GVQ0 90 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 FABP2P12104 132 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 CYBAP13498 195 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 TPT1P13693 172 aaKnown RBP-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 GLRXP35754 106 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 GTF2A1P52655 376 aaPredicted RBP-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 SPAG11BQ08648 103 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 RHOHQ15669 191 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 AKR1C8PQ5T2L2 129 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 PHF5AQ7RTV0 110 aaKnown RBP-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 CCL4L1Q8NHW4 92 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 DPH3Q96FX2 82 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 MCEEQ96PE7 176 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 AGPAT4-IT1Q9H0P7 198 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 TAF9BQ9HBM6 251 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 PRNDQ9UKY0 176 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 PYCARDQ9ULZ3 195 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 ARL2BPQ9Y2Y0 163 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 CAMSAP2Q08AD1 1489 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 IQSEC2Q5JU85 1478 aa-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.44□□□□□ -2.48
PDGFC-208ENST00000512711 SSC5DA1L4H1 1573 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 DLEC1Q9Y238 1755 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 BLMP54132 1417 aaPredicted RBP-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 KIAA1107Q9UPP5 1409 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 PLXNA1Q9UIW2 1896 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 GVQW2A0A096LPI5 108 aaPredicted RBP-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 ZNF670-ZNF695F2Z2N8 137 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 H3BQV1 296 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 K7EP34 96 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 M0R3E3 92 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 YPEL1O60688 119 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 APOC1P02654 83 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 TFF1P04155 84 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 APODP05090 189 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 CST2P09228 141 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 SAA1P0DJI8 122 aaPredicted RBP-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 PYYP10082 97 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 SDC4P31431 198 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 CDKN2CP42773 168 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 MAXP61244 160 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 ARF6P62330 175 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 CCL7P80098 99 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 DEFB112Q30KQ8 113 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 AKIRIN2Q53H80 203 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 OR5A2Q8NGI9 324 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 SMIM11BQ8TCY0 68 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 PPP1R1CQ8WVI7 109 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 DIRC1Q969H9 104 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 BORCS8Q96FH0 119 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 PRELID3AQ96N28 172 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 SMIM7Q9BQ49 75 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 OTORQ9NRC9 128 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 ARMC1Q9NVT9 282 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 BET1LQ9NYM9 111 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 SS18L2Q9UHA2 77 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 PRO0255Q9UI72 69 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 SLC22A13Q9Y226 551 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 MPC1Q9Y5U8 109 aa-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 GOLGA4Q13439 2230 aaKnown RBP-0.45□□□□□ -2.48
PDGFC-208ENST00000512711 PIK3C2AO00443 1686 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 SLIT1O75093 1534 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 TRAV12-2A0A075B6T6 113 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 TRAV17A0A0B4J275 112 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 TEX49A0A1B0GTD5 131 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 LOC107986453A0A1B0GWG9 222 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 IFITM5A6NNB3 132 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 ATG12O94817 140 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 IFNA6P05013 189 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 POLR2JP52435 117 aaKnown RBP-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 ELOF1P60002 83 aaKnown RBP-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 EMX2Q04743 252 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 FADDQ13158 208 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 WFDC2Q14508 124 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 CCSMST1Q4G0I0 132 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 SSBP3-AS1Q7Z2R9 100 aa-0.46□□□□□ -2.48
PDGFC-208ENST00000512711 TEX29Q8N6K0 151 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms