RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 TRAV1-2A0A0B4J238 106 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 TRAV12-3A0A0B4J271 114 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 TRBV7-6A0A0J9YX20 115 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 A0A1W2PRE2 83 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 ZNF815PA8K554 130 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 TSTD3H0UI37 97 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 CCDC179H3BU77 68 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 J3KT08 172 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 SNCGO76070 127 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 SPINK8P0C7L1 97 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 SLC25A6P12236 298 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 RPL22P35268 128 aaKnown RBP-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 GNG10P50151 68 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 POLR2HP52434 150 aaKnown RBP-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 NCS1P62166 190 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 EMX2Q04743 252 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 SPCS2Q15005 226 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 TMEM128Q5BJH2 165 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 CLLU1Q5K131 121 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 Q6ZRX8 168 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 SMIM15Q7Z3B0 74 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 DEFB132Q7Z7B7 95 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 NDUFA11Q86Y39 141 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 Q8IZM0 81 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 ATP6V0E2Q8NHE4 81 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 IFI27L1Q96BM0 104 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 SELENOSQ9BQE4 189 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 PSMG3Q9BT73 122 aaPredicted RBP-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 BOLA2Q9H3K6 86 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 BATF3Q9NR55 127 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 RPRMQ9NS64 109 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 SCN3BQ9NY72 215 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 HSPB11Q9Y547 144 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 SPCS1Q9Y6A9 102 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 ADGBQ8N7X0 1667 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 LRP5O75197 1615 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 CNOT1A5YKK6 2376 aaKnown RBP-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 CHD6Q8TD26 2715 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 MYH3P11055 1940 aa-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 GOLGA4Q13439 2230 aaKnown RBP-0.03□□□□□ -2.41
NPHP3-210ENST00000512094 CELSR2Q9HCU4 2923 aa-0.03□□□□□ -2.42
NPHP3-210ENST00000512094 OVOS2A0A0G2JMS6 1433 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 ZANQ9Y493 2812 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 EIF3AQ14152 1382 aaKnown RBP-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 TRGV1A0A0A0MS02 117 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 PIGBOS1A0A0B4J2F0 54 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 TMEM238C9JI98 176 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 J3QR89 54 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 PIN1P1O15428 100 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 IFNA17P01571 189 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 MT-ND4LP03901 98 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 IL5P05113 134 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 PIPP12273 146 aaPredicted RBP-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 CCL3L1P16619 93 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 RPL7P18124 248 aaKnown RBP-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 EDDM3BP56851 147 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 HAMPP81172 84 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 DCDP81605 110 aaKnown RBP-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 WFDC2Q14508 124 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 INSL4Q14641 139 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 CCDC153Q494R4 210 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 TMEM78Q5T7P6 136 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 SPANXN1Q5VSR9 72 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 CFAP126Q5VTH2 177 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 TMEM244Q5VVB8 128 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 OR2T2Q6IF00 324 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 TOMM20LQ6UXN7 152 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 MMGT1Q8N4V1 131 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 SPTSSBQ8NFR3 76 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 LZICQ8WZA0 190 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 CNFNQ9BYD5 112 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 CYP4F30PQ9H0H9 118 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 FXYD6Q9H0Q3 95 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 SPANXCQ9NY87 97 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 KDM5CP41229 1560 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 VIRMAQ69YN4 1812 aaKnown RBP-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 NBEAL1Q6ZS30 2694 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 PTPRGP23470 1445 aa-0.04□□□□□ -2.42
NPHP3-210ENST00000512094 MED23Q9ULK4 1368 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 NHSL1Q5SYE7 1610 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 FER1L6Q2WGJ9 1857 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 SETXQ7Z333 2677 aaKnown RBP-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 ATRQ13535 2644 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 CHD9Q3L8U1 2897 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 KIF13AQ9H1H9 1805 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 TRAV36DV7A0A075B6V5 113 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 TRBV10-3A0A0K0K1G6 114 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 CXorf51AA0A1B0GTR3 108 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 CTXND1A0A1B0GTU2 59 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 K7ERU9 68 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 M0R2Z0 102 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 TNFP01375 233 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 DBIP07108 87 aaKnown RBP-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 FABP1P07148 127 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 PIRTP0C851 137 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 HLA-DRB4P13762 266 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 NPC2P61916 151 aa-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 TFAMQ00059 246 aaKnown RBP-0.05□□□□□ -2.42
NPHP3-210ENST00000512094 PIGYQ3MUY2 71 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms