RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 FAM167A-AS1Q96KT0 104 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF488Q96MN9 340 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 RCHY1Q96PM5 261 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 ATP6V0BQ99437 205 aa1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 SSBP4Q9BWG4 385 aaPredicted RBP1.3□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM236DA0A1B0GTK5 79 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 DEFB108AA8MXU0 73 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRDCB7Z8K6 153 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 H0YGX0 51 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 PLA2G1BP04054 148 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ATP5G1P05496 136 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM236CP0DP71 79 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 IFITM1P13164 125 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TIMP3P35625 211 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ATP5G3P48201 142 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ICAM4Q14773 271 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 UBE2V2Q15819 145 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SRSF7Q16629 238 aaKnown RBP eCLIP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SP6Q3SY56 376 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPRNQ5BIV9 151 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 DMRTC1Q5HYR2 192 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPATA31B1PQ5VZV4 182 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST2H2BCQ6DN03 193 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST2H2BDQ6DRA6 164 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 CCL4L1Q8NHW4 92 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SSBP3Q9BWW4 388 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SCRT2Q9NQ03 307 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 MRPL27Q9P0M9 148 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 JPT1Q9UK76 154 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 PLA2G2DQ9UNK4 145 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRBV20-1A0A075B6N2 111 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRBV24-1A0A075B6N3 115 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 D6R8Y8 96 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 RAMP3O60896 148 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 AZU1P20160 251 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRTN3P24158 256 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 EFNA4P52798 201 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 CLDN12P56749 244 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 PSG3Q16557 428 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 CD300EQ496F6 205 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 C11orf71Q6IPW1 123 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 NFE4Q86UQ8 179 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 PCP2Q8IVA1 136 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 FGFRL1Q8N441 504 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 CT55Q8WUE5 264 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF625Q96I27 306 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGF2BP2-AS1Q96M15 143 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 CAMK2N2Q96S95 79 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 OPRPNQ99935 248 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 CYSTM1Q9H1C7 97 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 MRPL36Q9P0J6 103 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 EPDR1Q9UM22 224 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 B9D1Q9UPM9 204 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A087X0M5 115 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV2A0A0B4J234 112 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV13-2A0A0B4J235 113 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV13-1A0A0B4J241 112 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1B0GX30 115 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 GAGE12JA6NER3 117 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ACYP2P14621 99 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SRSF2Q01130 221 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 GAGE1Q13065 139 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 GAGE4Q13068 117 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 GAGE5Q13069 117 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 GAGE6Q13070 117 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIGD2BQ4VC39 106 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 BVES-AS1Q5T3Y7 98 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 HCP5Q6MZN7 132 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZCCHC24Q8N2G6 241 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ST6GALNAC6Q969X2 333 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 LINC00477Q96M19 166 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 NABP2Q9BQ15 211 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 UPK3BQ9BT76 320 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 GNB1LQ9BYB4 327 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 FOXA2Q9Y261 457 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF706Q9Y5V0 76 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SMAD5-AS1Q9Y6J3 95 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A0U1RQV5 110 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 WI2-2373I1.2A0A1W2PRP0 233 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM89A2RUT3 159 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 KNCNA6PVL3 124 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ANGP03950 147 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 BAALC-AS2P0C853 105 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 VPREB1P12018 145 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF134P52741 427 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 MORN2Q502X0 79 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 MORN5Q5VZ52 161 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ATP5L2Q7Z4Y8 100 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF329Q86UD4 541 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 RPP25LQ8N5L8 163 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 CCL13Q99616 98 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H2BLQ99880 126 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 SRSF8Q9BRL6 282 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 C1QTNF5Q9BXJ0 243 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM242Q9NWH2 141 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 FOXJ2Q9P0K8 574 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 HHLA3Q9XRX5 114 aa1.29□□□□□ -2.2
TRAPPC13-211ENST00000512009 IGKV1D-13A0A0B4J2D9 117 aa1.28□□□□□ -2.2
TRAPPC13-211ENST00000512009 SMIM27A0A1W2PRY6 76 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms