RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 SLC48A1Q6P1K1 146 aa0.76□□□□□ -2.29
SMN2-211ENST00000511873 NDUFA11Q86Y39 141 aa0.76□□□□□ -2.29
SMN2-211ENST00000511873 ARL11Q969Q4 196 aa0.76□□□□□ -2.29
SMN2-211ENST00000511873 ABCA1O95477 2261 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 FAM25AB3EWG3 89 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 FAM25CB3EWG5 89 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 FAM25GB3EWG6 89 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 SNCGO76070 127 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 HIST1H1DP16402 221 aaKnown RBP0.75□□□□□ -2.29
SMN2-211ENST00000511873 SELENOWP63302 87 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 S100A7L2Q5SY68 101 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 RPL7L1Q6DKI1 246 aaKnown RBP0.75□□□□□ -2.29
SMN2-211ENST00000511873 C10orf82Q8WW14 230 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 SPTSSAQ969W0 71 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 COA4Q9NYJ1 87 aa0.75□□□□□ -2.29
SMN2-211ENST00000511873 MUC22E2RYF6 1773 aaPredicted RBP0.75□□□□□ -2.29
SMN2-211ENST00000511873 AKAP11Q9UKA4 1901 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 TRAV12-2A0A075B6T6 113 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 FXYD6P3P58550 94 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 RPL37P61927 97 aaKnown RBP0.74□□□□□ -2.29
SMN2-211ENST00000511873 EMX2Q04743 252 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 C9orf116Q5BN46 136 aaPredicted RBP0.74□□□□□ -2.29
SMN2-211ENST00000511873 C20orf197Q8N268 126 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 PDCD10Q9BUL8 212 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 SEC11CQ9BY50 192 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 BET1LQ9NYM9 111 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 CCDC167Q9P0B6 97 aa0.74□□□□□ -2.29
SMN2-211ENST00000511873 GRIN2AQ12879 1464 aa0.73□□□□□ -2.29
SMN2-211ENST00000511873 TMEM2Q9UHN6 1383 aa0.73□□□□□ -2.29
SMN2-211ENST00000511873 A6NIN4 97 aa0.73□□□□□ -2.29
SMN2-211ENST00000511873 NDUFB6O95139 128 aa0.73□□□□□ -2.29
SMN2-211ENST00000511873 PIPP12273 146 aaPredicted RBP0.73□□□□□ -2.29
SMN2-211ENST00000511873 CCL3L1P16619 93 aa0.73□□□□□ -2.29
SMN2-211ENST00000511873 SPTSSBQ8NFR3 76 aa0.73□□□□□ -2.29
SMN2-211ENST00000511873 RPRMQ9NS64 109 aa0.73□□□□□ -2.29
SMN2-211ENST00000511873 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
SMN2-211ENST00000511873 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
SMN2-211ENST00000511873 A0A087WTM6 91 aa0.72□□□□□ -2.29
SMN2-211ENST00000511873 MEIG1Q5JSS6 88 aa0.72□□□□□ -2.29
SMN2-211ENST00000511873 C4orf33Q8N1A6 199 aa0.72□□□□□ -2.29
SMN2-211ENST00000511873 PPP1R1CQ8WVI7 109 aa0.72□□□□□ -2.29
SMN2-211ENST00000511873 DSCR8Q96T75 97 aa0.72□□□□□ -2.29
SMN2-211ENST00000511873 PHLPP1O60346 1717 aa0.72□□□□□ -2.29
SMN2-211ENST00000511873 MED13LQ71F56 2210 aa0.72□□□□□ -2.29
SMN2-211ENST00000511873 MYOM3Q5VTT5 1437 aa0.72□□□□□ -2.29
SMN2-211ENST00000511873 ZNF142P52746 1687 aaPredicted RBP0.72□□□□□ -2.29
SMN2-211ENST00000511873 SPEF2Q9C093 1822 aa0.71□□□□□ -2.3
SMN2-211ENST00000511873 KIAA0100Q14667 2235 aaKnown RBP0.71□□□□□ -2.3
SMN2-211ENST00000511873 A0A096LNT2 108 aa0.71□□□□□ -2.3
SMN2-211ENST00000511873 COX7B2Q8TF08 81 aa0.71□□□□□ -2.3
SMN2-211ENST00000511873 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
SMN2-211ENST00000511873 FAM92AA1XBS5 289 aa0.7□□□□□ -2.3
SMN2-211ENST00000511873 RBAKDNA6NC62 111 aa0.7□□□□□ -2.3
SMN2-211ENST00000511873 CBLN1P23435 193 aa0.7□□□□□ -2.3
SMN2-211ENST00000511873 SSBP1Q04837 148 aaKnown RBP0.7□□□□□ -2.3
SMN2-211ENST00000511873 LSM10Q969L4 123 aaKnown RBP0.7□□□□□ -2.3
SMN2-211ENST00000511873 FAM103A1Q9BTL3 118 aaKnown RBP0.7□□□□□ -2.3
SMN2-211ENST00000511873 AGPAT4-IT1Q9H0P7 198 aa0.7□□□□□ -2.3
SMN2-211ENST00000511873 FOCADQ5VW36 1801 aa0.7□□□□□ -2.3
SMN2-211ENST00000511873 LOC100130705A0A1B0GUX0 176 aa0.69□□□□□ -2.3
SMN2-211ENST00000511873 A0A1B0GV90 55 aa0.69□□□□□ -2.3
SMN2-211ENST00000511873 RPL13AP3Q6NVV1 102 aa0.69□□□□□ -2.3
SMN2-211ENST00000511873 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
SMN2-211ENST00000511873 LAMB1P07942 1786 aa0.69□□□□□ -2.3
SMN2-211ENST00000511873 MYH7P12883 1935 aa0.69□□□□□ -2.3
SMN2-211ENST00000511873 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
SMN2-211ENST00000511873 ROCK2O75116 1388 aaKnown RBP0.69□□□□□ -2.3
SMN2-211ENST00000511873 MEGF8Q7Z7M0 2845 aa0.69□□□□□ -2.3
SMN2-211ENST00000511873 PHIPQ8WWQ0 1821 aa0.68□□□□□ -2.3
SMN2-211ENST00000511873 EFCAB10A6NFE3 127 aa0.68□□□□□ -2.3
SMN2-211ENST00000511873 UBE2D1P51668 147 aa0.68□□□□□ -2.3
SMN2-211ENST00000511873 SPATA8Q6RVD6 105 aa0.68□□□□□ -2.3
SMN2-211ENST00000511873 TANC1Q9C0D5 1861 aa0.68□□□□□ -2.3
SMN2-211ENST00000511873 NRXN2Q9P2S2 1712 aa0.68□□□□□ -2.3
SMN2-211ENST00000511873 PLXNA1Q9UIW2 1896 aa0.68□□□□□ -2.3
SMN2-211ENST00000511873 RBBP6Q7Z6E9 1792 aaKnown RBP0.68□□□□□ -2.3
SMN2-211ENST00000511873 MYH9P35579 1960 aaKnown RBP0.67□□□□□ -2.3
SMN2-211ENST00000511873 DAPK1P53355 1430 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 TRBV7-1A0A0A6YYK4 115 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 CLPSL1A2RUU4 121 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 RBM3P98179 157 aaKnown RBP0.67□□□□□ -2.3
SMN2-211ENST00000511873 FAM74A4Q5TZK3 123 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.67□□□□□ -2.3
SMN2-211ENST00000511873 C1orf54Q8WWF1 131 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 Q96NJ1 140 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 SNRNP25Q9BV90 132 aaKnown RBP0.67□□□□□ -2.3
SMN2-211ENST00000511873 RERGLQ9H628 205 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 V9GYV3 84 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 MBD5Q9P267 1494 aa0.67□□□□□ -2.3
SMN2-211ENST00000511873 ARFGEF1Q9Y6D6 1849 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 APCP25054 2843 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 F2Z2F3 143 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 IFNA17P01571 189 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 APODP05090 189 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 SPINK7P58062 85 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 COPS9Q8WXC6 57 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 SERP1Q9Y6X1 66 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 F5P12259 2224 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 ZNF518AQ6AHZ1 1483 aa0.66□□□□□ -2.3
SMN2-211ENST00000511873 MAP2P11137 1827 aaKnown RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms