RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 UBE2D3P61077 147 aa8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 UBE2D2P62837 147 aa8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 RPL36AP83881 106 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 CIRBPQ14011 172 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 MIAQ16674 131 aa8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 OR11H4Q8NGC9 324 aa8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 RPL36ALQ969Q0 106 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 CHCHD5Q9BSY4 110 aa8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 IL36BQ9NZH7 164 aa8.38□□□□□ -1.07
POLR2J3-216ENST00000511773 TRBV7-3A0A075B6L6 115 aa8.37□□□□□ -1.07
POLR2J3-216ENST00000511773 TRBV6-8A0A0A6YYG3 113 aa8.37□□□□□ -1.07
POLR2J3-216ENST00000511773 hDV102S1A0JD36 115 aa8.37□□□□□ -1.07
POLR2J3-216ENST00000511773 B4DEV8 164 aa8.37□□□□□ -1.07
POLR2J3-216ENST00000511773 IGHV3-64A0A075B6Q5 118 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 TRBV10-1A0A0K0K1A3 114 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 GRIFINA4D1Z8 144 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 M0R036 132 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 M0R381 172 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 PTTG1O95997 202 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 SAPCD1Q5SSQ6 148 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 C7orf33Q8WU49 177 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 HSPB11Q9Y547 144 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 KIF25-AS1Q9Y6Z4 181 aa8.36□□□□□ -1.07
POLR2J3-216ENST00000511773 TRAV34A0A0B4J273 112 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 ARMS2P0C7Q2 107 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 CNBPP62633 177 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 SPACA4Q8TDM5 124 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 RNF185Q96GF1 192 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 SFRP2Q96HF1 295 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 EPDR1Q9UM22 224 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 PHLDA3Q9Y5J5 127 aa8.35□□□□□ -1.07
POLR2J3-216ENST00000511773 IGLV10-54A0A075B6I4 117 aa8.34□□□□□ -1.07
POLR2J3-216ENST00000511773 A0A0J9YXV3 536 aa8.34□□□□□ -1.07
POLR2J3-216ENST00000511773 FABP5P3A8MUU1 101 aa8.34□□□□□ -1.07
POLR2J3-216ENST00000511773 CDC34P49427 236 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-216ENST00000511773 SUMO1P63165 101 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-216ENST00000511773 WDR73Q6P4I2 378 aa8.34□□□□□ -1.07
POLR2J3-216ENST00000511773 CLRN3Q8NCR9 226 aa8.34□□□□□ -1.07
POLR2J3-216ENST00000511773 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
POLR2J3-216ENST00000511773 FAM240BA0A1B0GVZ2 78 aa8.33□□□□□ -1.08
POLR2J3-216ENST00000511773 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
POLR2J3-216ENST00000511773 GCHFRP30047 84 aa8.33□□□□□ -1.08
POLR2J3-216ENST00000511773 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
POLR2J3-216ENST00000511773 GTSF1Q8WW33 167 aa8.33□□□□□ -1.08
POLR2J3-216ENST00000511773 RBM38Q9H0Z9 239 aaKnown RBP8.33□□□□□ -1.08
POLR2J3-216ENST00000511773 WFDC1Q9HC57 220 aa8.33□□□□□ -1.08
POLR2J3-216ENST00000511773 TMSB15BA0A087X1C1 80 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 STAG3L2P0CL84 134 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 STAG3L3P0CL85 134 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 TPT1P13693 172 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 RPL12P30050 165 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 PKIAP61925 76 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 RBX1P62877 108 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 GAGE6Q13070 117 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 ZNF56Q15929 161 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 OR10G8Q8NGN5 311 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 PPP1R1CQ8WVI7 109 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 AP5S1Q9NUS5 200 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 PRR34Q9NV39 138 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 PLAC8Q9NZF1 115 aa8.32□□□□□ -1.08
POLR2J3-216ENST00000511773 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-216ENST00000511773 SLPIP03973 132 aa8.31□□□□□ -1.08
POLR2J3-216ENST00000511773 Q86TA4 180 aa8.31□□□□□ -1.08
POLR2J3-216ENST00000511773 NEXN-AS1Q8NBZ9 246 aa8.31□□□□□ -1.08
POLR2J3-216ENST00000511773 RAB24Q969Q5 203 aa8.31□□□□□ -1.08
POLR2J3-216ENST00000511773 LPAP08519 4548 aa8.31□□□□□ -1.08
POLR2J3-216ENST00000511773 SH2D1AO60880 128 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 RAB5CP51148 216 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 H2BFSP57053 126 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 CYCSP99999 105 aaKnown RBP8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 DNLZQ5SXM8 178 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 NTM-AS1Q6ZSK4 140 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 ZFP82Q8N141 532 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 LYPD6BQ8NI32 183 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 SUN5Q8TC36 379 aa8.3□□□□□ -1.08
POLR2J3-216ENST00000511773 IGKV2-24A0A0C4DH68 120 aa8.29□□□□□ -1.08
POLR2J3-216ENST00000511773 IFNA7P01567 189 aa8.29□□□□□ -1.08
POLR2J3-216ENST00000511773 CRIP1P50238 77 aa8.29□□□□□ -1.08
POLR2J3-216ENST00000511773 RAB4BP61018 213 aa8.29□□□□□ -1.08
POLR2J3-216ENST00000511773 MAJINQ3KP22 176 aa8.29□□□□□ -1.08
POLR2J3-216ENST00000511773 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
POLR2J3-216ENST00000511773 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-216ENST00000511773 MUC21A0A0G2JKD1 596 aa8.28□□□□□ -1.08
POLR2J3-216ENST00000511773 MPC2O95563 127 aa8.28□□□□□ -1.08
POLR2J3-216ENST00000511773 PET100P0DJ07 73 aa8.28□□□□□ -1.08
POLR2J3-216ENST00000511773 COX6A2Q02221 97 aa8.28□□□□□ -1.08
POLR2J3-216ENST00000511773 REG3AQ06141 175 aa8.28□□□□□ -1.08
POLR2J3-216ENST00000511773 DERL1Q9BUN8 251 aa8.28□□□□□ -1.08
POLR2J3-216ENST00000511773 TMEM167BQ9NRX6 74 aa8.28□□□□□ -1.08
POLR2J3-216ENST00000511773 PEX7O00628 323 aa8.27□□□□□ -1.09
POLR2J3-216ENST00000511773 CXorf1O96002 111 aa8.27□□□□□ -1.09
POLR2J3-216ENST00000511773 FAM162BQ5T6X4 162 aa8.27□□□□□ -1.09
POLR2J3-216ENST00000511773 MZT2BQ6NZ67 158 aa8.27□□□□□ -1.09
POLR2J3-216ENST00000511773 KRTAP9-2Q9BYQ4 174 aa8.27□□□□□ -1.09
POLR2J3-216ENST00000511773 TRBV25-1A0A075B6N4 114 aa8.26□□□□□ -1.09
POLR2J3-216ENST00000511773 F5H697 171 aa8.26□□□□□ -1.09
POLR2J3-216ENST00000511773 DEFA3P59666 94 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms