RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 PAM16Q9Y3D7 125 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 PLCE1Q9P212 2302 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 H7C2G1 150 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 C2orf66Q6UXQ4 117 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 TIMM21Q9BVV7 248 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 COX11Q9Y6N1 276 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 MYMXA0A1B0GTQ4 84 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 SMIM2Q9BVW6 85 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 IGHV3-64A0A075B6Q5 118 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 G3V4G9 280 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 HERVK_113P63121 156 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 CLPSL2Q6UWE3 100 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 NOTCH2Q04721 2471 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.82□□□□□ -1.82e-6■■■□□ 15.1
PHF3-210ENST00000509876 TRBV10-1A0A0K0K1A3 114 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 ZFP2Q6ZN57 461 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 WFDC10AQ9H1F0 79 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 TRAV8-2A0A0B4J237 113 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 LY6G6CO95867 125 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 AMTNQ6UX39 209 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 NKAPP1Q8N9T2 125 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 NFE4Q86UQ8 179 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 SPANXA1Q9NS26 97 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 MDFICQ9P1T7 246 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 K7EN84 100 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 PMVKQ15126 192 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 Q6ZTI0 123 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 C12orf57Q99622 126 aa3.82□□□□□ -1.8
PHF3-210ENST00000509876 ABCA1O95477 2261 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 PKD1L2Q7Z442 2459 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 A0A096LNT2 108 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 DCANP1Q8TF63 244 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 HTTP42858 3142 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 TMEM238C9JI98 176 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.81□□□□□ -1.8
PHF3-210ENST00000509876 IGKV2-29A2NJV5 120 aaPredicted RBP3.81□□□□□ -1.8
PHF3-210ENST00000509876 DNAL4O96015 105 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 XCL1P47992 114 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 VSIG2Q96IQ7 327 aa3.81□□□□□ -1.8
PHF3-210ENST00000509876 GDF5OSQ5U4N7 250 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 PRIMA1Q86XR5 153 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 JPT2Q9H910 190 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 PRSS29PA6NIE9 313 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 ZNF815PA8K554 130 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 SMIM6P0DI80 62 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 RPL24P83731 157 aaKnown RBP3.8□□□□□ -1.8
PHF3-210ENST00000509876 ATOH7Q8N100 152 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 GTSF1LQ9H1H1 148 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 CRYGDP07320 174 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 LYPD6BQ8NI32 183 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 CHAC1Q9BUX1 264 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 CST9LQ9H4G1 147 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 UQCR10Q9UDW1 63 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 TP53TG3Q9ULZ0 132 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 NANOS2P60321 138 aaKnown RBP3.8□□□□□ -1.8
PHF3-210ENST00000509876 ODF3L2Q3SX64 289 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 PRO1933Q9H354 126 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 NPYP01303 97 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 KRTAP1-3Q8IUG1 177 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 CHD8Q9HCK8 2581 aa3.8□□□□□ -1.8
PHF3-210ENST00000509876 ARFGEF3Q5TH69 2177 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 DNAH12Q6ZR08 3092 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 TRAV8-3A0A0A6YYJ7 113 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 CTRLP40313 264 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 SFTA2Q6UW10 78 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 HCFC1P51610 2035 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 COX7A2LO14548 114 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 LEPROTO15243 131 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 RS1O15537 224 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 SPG11Q96JI7 2443 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 ZNF25P17030 456 aaPredicted RBP3.79□□□□□ -1.8
PHF3-210ENST00000509876 RETNQ9HD89 108 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 TRBV6-4A0A1B0GX49 114 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 J3QR89 54 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 CHD9Q3L8U1 2897 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 CAMK2N2Q96S95 79 aa3.79□□□□□ -1.8
PHF3-210ENST00000509876 A0A0U1RRA0 63 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 SIVA1O15304 175 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 RPL18AQ02543 176 aaKnown RBP3.78□□□□□ -1.8
PHF3-210ENST00000509876 H7C423 109 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 NXPH4O95158 308 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 UBE2BP63146 152 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 FHL3Q13643 280 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 ORAOV1Q8WV07 137 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 KLK12Q9UKR0 248 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 KPRPQ5T749 579 aaPredicted RBP3.78□□□□□ -1.8
PHF3-210ENST00000509876 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
PHF3-210ENST00000509876 ZNF479Q96JC4 524 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 LOC107984156A0A0G2JMH3 177 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 hDV102S1A0JD36 115 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 EDN2P20800 178 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 ATRAIDQ6UW56 229 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 ARL17AQ8IVW1 177 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 C9JQL5 133 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 CFAP126Q5VTH2 177 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 DOCK11Q5JSL3 2073 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 SMIM13P0DJ93 91 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 GTF2H5Q6ZYL4 71 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 ZFAND2AQ8N6M9 145 aa3.78□□□□□ -1.8
PHF3-210ENST00000509876 IGLV10-54A0A075B6I4 117 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms