RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 IGHV3-30-5P0DP03 117 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 CBLN1P23435 193 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 MPV17LQ2QL34 196 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 KRTAP6-3Q3LI67 103 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 COL5A1-AS1Q5SY13 56 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 C12orf73Q69YU5 71 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 UNQ5815/PRO19632Q6UWF5 114 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 C10orf82Q8WW14 230 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 IFI27L1Q96BM0 104 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 WFDC10AQ9H1F0 79 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 C22orf24Q9Y442 160 aa0.87□□□□□ -2.27
XRCC4-204ENST00000509268 PLXNA2O75051 1894 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 GBF1Q92538 1859 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 SDK1Q7Z5N4 2213 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 MUC22E2RYF6 1773 aaPredicted RBP0.86□□□□□ -2.27
XRCC4-204ENST00000509268 NRKQ7Z2Y5 1582 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 TCRBV3S1A0A5B6 114 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 RBAKDNA6NC62 111 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 TMEM262E9PQX1 116 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 JMJD7-PLA2G4BH0Y9G9 81 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 J3QRE1 110 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 M0R2N4 97 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 INE1O15225 51 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 MRPS14O60783 128 aaKnown RBP0.86□□□□□ -2.27
XRCC4-204ENST00000509268 DNAL4O96015 105 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 PDE6GP18545 87 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 DEFB103AP81534 67 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 PCOTHQ58A44 107 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 LINC00299Q6ZSB3 139 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 C5orf38Q86SI9 138 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 SBSPONQ8IVN8 264 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 SPTSSBQ8NFR3 76 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 DMAC1Q96GE9 116 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 AQP10Q96PS8 301 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 ATG5Q9H1Y0 275 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 TMEM106BQ9NUM4 274 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 LINC00474Q9P2X8 69 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 CTTNBP2Q8WZ74 1663 aa0.86□□□□□ -2.27
XRCC4-204ENST00000509268 MYO18AQ92614 2054 aaKnown RBP0.86□□□□□ -2.27
XRCC4-204ENST00000509268 RBBP6Q7Z6E9 1792 aaKnown RBP0.85□□□□□ -2.27
XRCC4-204ENST00000509268 INTS1Q8N201 2190 aaKnown RBP0.85□□□□□ -2.27
XRCC4-204ENST00000509268 ADGRB2O60241 1585 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 EXPH5Q8NEV8 1989 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 MUC6Q6W4X9 2439 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 TRGV2A0A075B6R0 118 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 LOC110117498A0A087WWA1 95 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 TRAV12-3A0A0B4J271 114 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 TRBV10-1A0A0K0K1A3 114 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 PVALEFA0A1B0GWK0 134 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 FAM24AA6NFZ4 105 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 HCRTO43612 131 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
XRCC4-204ENST00000509268 MT-ATP8P03928 68 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 CCKP06307 115 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 RPL7L1Q6DKI1 246 aaKnown RBP0.85□□□□□ -2.27
XRCC4-204ENST00000509268 TET1Q8NFU7 2136 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 MRPL35Q9NZE8 188 aaKnown RBP0.85□□□□□ -2.27
XRCC4-204ENST00000509268 KIAA0100Q14667 2235 aaKnown RBP0.85□□□□□ -2.27
XRCC4-204ENST00000509268 SIP14410 1827 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 DAPK1P53355 1430 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 CPSF1Q10570 1443 aaKnown RBP0.85□□□□□ -2.27
XRCC4-204ENST00000509268 CASKIN1Q8WXD9 1431 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 PTPRDP23468 1912 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 IFT140Q96RY7 1462 aa0.85□□□□□ -2.27
XRCC4-204ENST00000509268 MED13Q9UHV7 2174 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 TRAV23DV6A0A075B6W5 121 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 UBE2L5PA0A1B0GUS4 154 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 A6NIN4 97 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 HCG22E2RYF7 251 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 IL9P15248 144 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 SNCAP37840 140 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 KRTAP12-1P59990 96 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 UBE2L3P68036 154 aaKnown RBP0.84□□□□□ -2.27
XRCC4-204ENST00000509268 LINC00322Q6ZN03 302 aaPredicted RBP0.84□□□□□ -2.27
XRCC4-204ENST00000509268 NDUFA11Q86Y39 141 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 TMEM14CQ9P0S9 112 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 LINC00312Q9Y6C7 94 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 C10orf71Q711Q0 1435 aa0.84□□□□□ -2.27
XRCC4-204ENST00000509268 RAPGEF2Q9Y4G8 1499 aa0.84□□□□□ -2.28
XRCC4-204ENST00000509268 ABCA4P78363 2273 aa0.84□□□□□ -2.28
XRCC4-204ENST00000509268 SCRIBQ14160 1630 aa0.84□□□□□ -2.28
XRCC4-204ENST00000509268 SPHKAPQ2M3C7 1700 aa0.84□□□□□ -2.28
XRCC4-204ENST00000509268 LAMB1P07942 1786 aa0.84□□□□□ -2.28
XRCC4-204ENST00000509268 TNRC6BQ9UPQ9 1833 aaKnown RBP0.84□□□□□ -2.28
XRCC4-204ENST00000509268 TRBV10-3A0A0K0K1G6 114 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 LOC101927531A0A1B0GV80 90 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 FXYD4P59646 89 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 UBA52P62987 128 aaKnown RBP0.83□□□□□ -2.28
XRCC4-204ENST00000509268 CCL8P80075 99 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 DCDP81605 110 aaKnown RBP0.83□□□□□ -2.28
XRCC4-204ENST00000509268 COMMD6Q7Z4G1 85 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 ZCCHC13Q8WW36 166 aaKnown RBP0.83□□□□□ -2.28
XRCC4-204ENST00000509268 OBSCN-AS1Q96MR7 158 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 TTC37Q6PGP7 1564 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 CASP8AP2Q9UKL3 1982 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 ZGRF1Q86YA3 2104 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 SPAG17Q6Q759 2223 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 TRAV13-2A0A0B4J235 113 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 NBDYA0A0U1RRE5 68 aa0.83□□□□□ -2.28
XRCC4-204ENST00000509268 CLPSL1A2RUU4 121 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms