RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PSCAO43653 123 aa12.63□□□□□ -0.39
UBE3D-207ENST00000509102 C1QBP02746 253 aa12.63□□□□□ -0.39
UBE3D-207ENST00000509102 CXCL1P09341 107 aa12.63□□□□□ -0.39
UBE3D-207ENST00000509102 SULT1A2P50226 295 aa12.63□□□□□ -0.39
UBE3D-207ENST00000509102 SAMD10Q9BYL1 202 aa12.63□□□□□ -0.39
UBE3D-207ENST00000509102 PGPEP1Q9NXJ5 209 aa12.63□□□□□ -0.39
UBE3D-207ENST00000509102 A0A087WWL8 130 aa12.62□□□□□ -0.39
UBE3D-207ENST00000509102 RPL35P42766 123 aaKnown RBP12.62□□□□□ -0.39
UBE3D-207ENST00000509102 UFSP1Q6NVU6 142 aa12.62□□□□□ -0.39
UBE3D-207ENST00000509102 Q6ZSN1 163 aa12.62□□□□□ -0.39
UBE3D-207ENST00000509102 MLST8Q9BVC4 326 aa12.62□□□□□ -0.39
UBE3D-207ENST00000509102 KRTAP10-2P60368 255 aa12.61□□□□□ -0.39
UBE3D-207ENST00000509102 CDPF1Q6NVV7 123 aa12.61□□□□□ -0.39
UBE3D-207ENST00000509102 AKAP14Q86UN6 197 aa12.61□□□□□ -0.39
UBE3D-207ENST00000509102 C11orf52Q96A22 123 aa12.61□□□□□ -0.39
UBE3D-207ENST00000509102 PDE6DO43924 150 aa12.6□□□□□ -0.39
UBE3D-207ENST00000509102 IGHV3-30P01768 117 aa12.6□□□□□ -0.39
UBE3D-207ENST00000509102 IGHV3-33P01772 117 aa12.6□□□□□ -0.39
UBE3D-207ENST00000509102 IGHV3-30-3P0DP02 117 aa12.6□□□□□ -0.39
UBE3D-207ENST00000509102 IGHV3-30-5P0DP03 117 aa12.6□□□□□ -0.39
UBE3D-207ENST00000509102 CCL20P78556 96 aa12.6□□□□□ -0.39
UBE3D-207ENST00000509102 C14orf178Q8N769 122 aaPredicted RBP12.6□□□□□ -0.39
UBE3D-207ENST00000509102 DAZAP1Q96EP5 407 aaKnown RBP12.6□□□□□ -0.39
UBE3D-207ENST00000509102 A0A087WTM6 91 aa12.59□□□□□ -0.39
UBE3D-207ENST00000509102 TRBV10-1A0A0K0K1A3 114 aa12.59□□□□□ -0.39
UBE3D-207ENST00000509102 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
UBE3D-207ENST00000509102 RPL19P84098 196 aaKnown RBP12.59□□□□□ -0.39
UBE3D-207ENST00000509102 MEF2BQ02080 365 aaPredicted RBP12.59□□□□□ -0.39
UBE3D-207ENST00000509102 SPANXN1Q5VSR9 72 aa12.59□□□□□ -0.39
UBE3D-207ENST00000509102 Q6ZNX1 250 aa12.59□□□□□ -0.39
UBE3D-207ENST00000509102 LINC00694P0DN24 101 aa12.58□□□□□ -0.4
UBE3D-207ENST00000509102 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
UBE3D-207ENST00000509102 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.4
UBE3D-207ENST00000509102 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
UBE3D-207ENST00000509102 RPL36ALQ969Q0 106 aaKnown RBP12.58□□□□□ -0.4
UBE3D-207ENST00000509102 Q9HAA7 133 aa12.58□□□□□ -0.4
UBE3D-207ENST00000509102 URGCP-MRPS24S4R325 110 aa12.58□□□□□ -0.4
UBE3D-207ENST00000509102 OR5AL1P0C617 328 aa12.57□□□□□ -0.4
UBE3D-207ENST00000509102 SMCPP49901 116 aaPredicted RBP12.57□□□□□ -0.4
UBE3D-207ENST00000509102 GNG4P50150 75 aa12.57□□□□□ -0.4
UBE3D-207ENST00000509102 LAGE3Q14657 143 aa12.57□□□□□ -0.4
UBE3D-207ENST00000509102 ZNF56Q15929 161 aa12.57□□□□□ -0.4
UBE3D-207ENST00000509102 TOR2AQ5JU69 321 aa12.57□□□□□ -0.4
UBE3D-207ENST00000509102 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.57□□□□□ -0.4
UBE3D-207ENST00000509102 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
UBE3D-207ENST00000509102 DERL1Q9BUN8 251 aa12.57□□□□□ -0.4
UBE3D-207ENST00000509102 BIN3Q9NQY0 253 aa12.57□□□□□ -0.4
UBE3D-207ENST00000509102 SNAI2O43623 268 aa12.56□□□□□ -0.4
UBE3D-207ENST00000509102 SMIM17P0DL12 118 aa12.56□□□□□ -0.4
UBE3D-207ENST00000509102 KCNIP4Q6PIL6 250 aa12.56□□□□□ -0.4
UBE3D-207ENST00000509102 OR10AG1Q8NH19 301 aa12.56□□□□□ -0.4
UBE3D-207ENST00000509102 TM2D2Q9BX73 214 aa12.56□□□□□ -0.4
UBE3D-207ENST00000509102 MED9Q9NWA0 146 aa12.56□□□□□ -0.4
UBE3D-207ENST00000509102 hCG_2014768A0A024R1R8 64 aa12.55□□□□□ -0.4
UBE3D-207ENST00000509102 XKRY2A2RUG3 117 aa12.55□□□□□ -0.4
UBE3D-207ENST00000509102 BCL2P10415 239 aa12.55□□□□□ -0.4
UBE3D-207ENST00000509102 RPS20P60866 119 aaKnown RBP12.55□□□□□ -0.4
UBE3D-207ENST00000509102 RAB4BP61018 213 aa12.55□□□□□ -0.4
UBE3D-207ENST00000509102 SSBP4Q9BWG4 385 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-207ENST00000509102 VAX2Q9UIW0 290 aa12.55□□□□□ -0.4
UBE3D-207ENST00000509102 TRBV7-3A0A075B6L6 115 aa12.54□□□□□ -0.4
UBE3D-207ENST00000509102 TRAV8-3A0A0A6YYJ7 113 aa12.54□□□□□ -0.4
UBE3D-207ENST00000509102 MAPKAPK5-AS1Q8N8E1 139 aa12.54□□□□□ -0.4
UBE3D-207ENST00000509102 AP1S3Q96PC3 154 aa12.54□□□□□ -0.4
UBE3D-207ENST00000509102 F5H697 171 aa12.53□□□□□ -0.4
UBE3D-207ENST00000509102 OR2D3Q8NGH3 330 aa12.53□□□□□ -0.4
UBE3D-207ENST00000509102 TPPP3Q9BW30 176 aa12.53□□□□□ -0.4
UBE3D-207ENST00000509102 Q9UF83 564 aa12.53□□□□□ -0.4
UBE3D-207ENST00000509102 RYR1P21817 5038 aa12.52□□□□□ -0.4
UBE3D-207ENST00000509102 P01737 135 aa12.52□□□□□ -0.41
UBE3D-207ENST00000509102 SSTP61278 116 aa12.52□□□□□ -0.41
UBE3D-207ENST00000509102 PCLOQ9Y6V0 5065 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 LRP1BQ9NZR2 4599 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 A0A087WX48 190 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 MUC21A0A0G2JKD1 596 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 MUC21A0A140T8X8 626 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 RAB19A4D1S5 217 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 FER1L6-AS1Q8NA97 138 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 COX11Q9Y6N1 276 aa12.51□□□□□ -0.41
UBE3D-207ENST00000509102 UBE2D3P61077 147 aa12.5□□□□□ -0.41
UBE3D-207ENST00000509102 UBE2D2P62837 147 aa12.5□□□□□ -0.41
UBE3D-207ENST00000509102 BLOC1S1P78537 153 aa12.5□□□□□ -0.41
UBE3D-207ENST00000509102 ELOBQ15370 118 aa12.5□□□□□ -0.41
UBE3D-207ENST00000509102 OR10G8Q8NGN5 311 aa12.5□□□□□ -0.41
UBE3D-207ENST00000509102 RMI2Q96E14 147 aa12.5□□□□□ -0.41
UBE3D-207ENST00000509102 IGLV2-8P01709 118 aa12.49□□□□□ -0.41
UBE3D-207ENST00000509102 CACNG7P62955 275 aa12.49□□□□□ -0.41
UBE3D-207ENST00000509102 DAZ4Q86SG3 579 aaKnown RBP12.49□□□□□ -0.41
UBE3D-207ENST00000509102 NTN5Q8WTR8 489 aaPredicted RBP12.49□□□□□ -0.41
UBE3D-207ENST00000509102 CHCHD7Q9BUK0 85 aa12.49□□□□□ -0.41
UBE3D-207ENST00000509102 DAZ3Q9NR90 486 aaKnown RBP12.49□□□□□ -0.41
UBE3D-207ENST00000509102 IGLV5-52A0A0A0MRZ9 124 aa12.48□□□□□ -0.41
UBE3D-207ENST00000509102 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
UBE3D-207ENST00000509102 F2Z2F3 143 aa12.48□□□□□ -0.41
UBE3D-207ENST00000509102 J3QL48 77 aa12.48□□□□□ -0.41
UBE3D-207ENST00000509102 NIT1Q86X76 327 aa12.48□□□□□ -0.41
UBE3D-207ENST00000509102 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 H7C1H1 209 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 GZMBP10144 247 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms