RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 KRTAP10-1P60331 282 aa14.79□□□□□ -0.04
PACRGL-220ENST00000508952 FAM74A4Q5TZK3 123 aa14.79□□□□□ -0.04
PACRGL-220ENST00000508952 BOLA1Q9Y3E2 137 aa14.79□□□□□ -0.04
PACRGL-220ENST00000508952 PHLDA3Q9Y5J5 127 aa14.79□□□□□ -0.04
PACRGL-220ENST00000508952 A0A087WWL8 130 aa14.78□□□□□ -0.04
PACRGL-220ENST00000508952 SCO2A0A1W2PP80 73 aa14.78□□□□□ -0.04
PACRGL-220ENST00000508952 M0R381 172 aa14.78□□□□□ -0.04
PACRGL-220ENST00000508952 TPT1P13693 172 aaKnown RBP14.78□□□□□ -0.04
PACRGL-220ENST00000508952 LRCOL1A6NCL2 159 aa14.77□□□□□ -0.05
PACRGL-220ENST00000508952 RHODO00212 210 aa14.77□□□□□ -0.05
PACRGL-220ENST00000508952 SFRP2Q96HF1 295 aa14.77□□□□□ -0.05
PACRGL-220ENST00000508952 PFDN1O60925 122 aa14.75□□□□□ -0.05
PACRGL-220ENST00000508952 H2AFB1P0C5Y9 115 aa14.75□□□□□ -0.05
PACRGL-220ENST00000508952 XGP55808 180 aa14.75□□□□□ -0.05
PACRGL-220ENST00000508952 RPL19P84098 196 aaKnown RBP14.75□□□□□ -0.05
PACRGL-220ENST00000508952 TMUB2Q71RG4 321 aa14.75□□□□□ -0.05
PACRGL-220ENST00000508952 ZFP82Q8N141 532 aa14.75□□□□□ -0.05
PACRGL-220ENST00000508952 S100A9P06702 114 aaKnown RBP14.73□□□□□ -0.05
PACRGL-220ENST00000508952 LAGE3Q14657 143 aa14.73□□□□□ -0.05
PACRGL-220ENST00000508952 GCSHP23434 173 aa14.72□□□□□ -0.05
PACRGL-220ENST00000508952 EIF5AP63241 154 aaKnown RBP14.72□□□□□ -0.05
PACRGL-220ENST00000508952 DAZ4Q86SG3 579 aaKnown RBP14.72□□□□□ -0.05
PACRGL-220ENST00000508952 BAGE2Q86Y30 109 aa14.72□□□□□ -0.05
PACRGL-220ENST00000508952 MLST8Q9BVC4 326 aa14.72□□□□□ -0.05
PACRGL-220ENST00000508952 DAZ3Q9NR90 486 aaKnown RBP14.72□□□□□ -0.05
PACRGL-220ENST00000508952 A0A087WWC5 75 aa14.71□□□□□ -0.05
PACRGL-220ENST00000508952 IGLV5-52A0A0A0MRZ9 124 aa14.71□□□□□ -0.05
PACRGL-220ENST00000508952 FAT1Q14517 4588 aa14.7□□□□□ -0.06
PACRGL-220ENST00000508952 CCL20P78556 96 aa14.7□□□□□ -0.06
PACRGL-220ENST00000508952 PRR27Q6MZM9 219 aa14.7□□□□□ -0.06
PACRGL-220ENST00000508952 Q8N814 137 aa14.7□□□□□ -0.06
PACRGL-220ENST00000508952 OR10AG1Q8NH19 301 aa14.7□□□□□ -0.06
PACRGL-220ENST00000508952 EPM2AB3EWF7 344 aa14.68□□□□□ -0.06
PACRGL-220ENST00000508952 NTN5Q8WTR8 489 aaPredicted RBP14.68□□□□□ -0.06
PACRGL-220ENST00000508952 DERL1Q9BUN8 251 aa14.68□□□□□ -0.06
PACRGL-220ENST00000508952 TM2D2Q9BX73 214 aa14.68□□□□□ -0.06
PACRGL-220ENST00000508952 GNG13Q9P2W3 67 aa14.68□□□□□ -0.06
PACRGL-220ENST00000508952 TRAV8-3A0A0A6YYJ7 113 aa14.67□□□□□ -0.06
PACRGL-220ENST00000508952 MUC21A0A0G2JKD1 596 aa14.67□□□□□ -0.06
PACRGL-220ENST00000508952 MUC21A0A140T8X8 626 aa14.67□□□□□ -0.06
PACRGL-220ENST00000508952 RPL35P42766 123 aaKnown RBP14.67□□□□□ -0.06
PACRGL-220ENST00000508952 WFDC2Q14508 124 aa14.67□□□□□ -0.06
PACRGL-220ENST00000508952 CXCL1P09341 107 aa14.66□□□□□ -0.06
PACRGL-220ENST00000508952 HAMPP81172 84 aa14.66□□□□□ -0.06
PACRGL-220ENST00000508952 NIT1Q86X76 327 aa14.66□□□□□ -0.06
PACRGL-220ENST00000508952 MANBALQ9NQG1 85 aa14.66□□□□□ -0.06
PACRGL-220ENST00000508952 VPS13BQ7Z7G8 4022 aa14.66□□□□□ -0.06
PACRGL-220ENST00000508952 TRBV10-1A0A0K0K1A3 114 aa14.65□□□□□ -0.06
PACRGL-220ENST00000508952 LECT2O14960 151 aa14.65□□□□□ -0.06
PACRGL-220ENST00000508952 UBE2D3P61077 147 aa14.65□□□□□ -0.06
PACRGL-220ENST00000508952 UBE2D2P62837 147 aa14.65□□□□□ -0.06
PACRGL-220ENST00000508952 RPL36AP83881 106 aaKnown RBP14.65□□□□□ -0.06
PACRGL-220ENST00000508952 ZNF56Q15929 161 aa14.65□□□□□ -0.06
PACRGL-220ENST00000508952 RPL36ALQ969Q0 106 aaKnown RBP14.65□□□□□ -0.06
PACRGL-220ENST00000508952 DNAJC30Q96LL9 226 aa14.65□□□□□ -0.06
PACRGL-220ENST00000508952 URGCP-MRPS24S4R325 110 aa14.65□□□□□ -0.06
PACRGL-220ENST00000508952 TRBV7-3A0A075B6L6 115 aa14.64□□□□□ -0.07
PACRGL-220ENST00000508952 SNAI2O43623 268 aa14.64□□□□□ -0.07
PACRGL-220ENST00000508952 SSTP61278 116 aa14.64□□□□□ -0.07
PACRGL-220ENST00000508952 TOR2AQ5JU69 321 aa14.64□□□□□ -0.07
PACRGL-220ENST00000508952 C11orf52Q96A22 123 aa14.64□□□□□ -0.07
PACRGL-220ENST00000508952 SSBP4Q9BWG4 385 aaPredicted RBP14.64□□□□□ -0.07
PACRGL-220ENST00000508952 DNAH8Q96JB1 4490 aa14.63□□□□□ -0.07
PACRGL-220ENST00000508952 TRAV1-1A0A0B4J248 108 aa14.63□□□□□ -0.07
PACRGL-220ENST00000508952 RAB4BP61018 213 aa14.63□□□□□ -0.07
PACRGL-220ENST00000508952 SMR3BP02814 79 aaPredicted RBP14.62□□□□□ -0.07
PACRGL-220ENST00000508952 OR5AL1P0C617 328 aa14.62□□□□□ -0.07
PACRGL-220ENST00000508952 RAB5CP51148 216 aa14.62□□□□□ -0.07
PACRGL-220ENST00000508952 CENPWQ5EE01 88 aa14.62□□□□□ -0.07
PACRGL-220ENST00000508952 Q5VSD8 79 aa14.62□□□□□ -0.07
PACRGL-220ENST00000508952 SPANXN1Q5VSR9 72 aa14.62□□□□□ -0.07
PACRGL-220ENST00000508952 NEXN-AS1Q8NBZ9 246 aa14.62□□□□□ -0.07
PACRGL-220ENST00000508952 OR10G8Q8NGN5 311 aa14.62□□□□□ -0.07
PACRGL-220ENST00000508952 KLK12Q9UKR0 248 aa14.62□□□□□ -0.07
PACRGL-220ENST00000508952 A0A087WX48 190 aa14.6□□□□□ -0.07
PACRGL-220ENST00000508952 EIF5AL1Q6IS14 154 aaKnown RBP14.6□□□□□ -0.07
PACRGL-220ENST00000508952 FRZBQ92765 325 aa14.6□□□□□ -0.07
PACRGL-220ENST00000508952 RAB19A4D1S5 217 aa14.59□□□□□ -0.07
PACRGL-220ENST00000508952 F5H697 171 aa14.59□□□□□ -0.07
PACRGL-220ENST00000508952 IGLV2-8P01709 118 aa14.59□□□□□ -0.07
PACRGL-220ENST00000508952 GZMBP10144 247 aa14.59□□□□□ -0.07
PACRGL-220ENST00000508952 SULT1A2P50226 295 aa14.59□□□□□ -0.07
PACRGL-220ENST00000508952 TCTE3Q8IZS6 198 aa14.59□□□□□ -0.07
PACRGL-220ENST00000508952 BAALCQ8WXS3 180 aa14.59□□□□□ -0.07
PACRGL-220ENST00000508952 TMEM70Q9BUB7 260 aa14.59□□□□□ -0.07
PACRGL-220ENST00000508952 IGKV2D-24A0A075B6R9 120 aa14.58□□□□□ -0.08
PACRGL-220ENST00000508952 RBFOX3A6NFN3 312 aa14.58□□□□□ -0.08
PACRGL-220ENST00000508952 TEX46H3BTG2 121 aa14.58□□□□□ -0.08
PACRGL-220ENST00000508952 UBE2WQ96B02 151 aa14.58□□□□□ -0.08
PACRGL-220ENST00000508952 FAM30AQ9NZY2 134 aa14.58□□□□□ -0.08
PACRGL-220ENST00000508952 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.57□□□□□ -0.08
PACRGL-220ENST00000508952 TRBV6-8A0A0A6YYG3 113 aa14.57□□□□□ -0.08
PACRGL-220ENST00000508952 KCNIP4Q6PIL6 250 aa14.57□□□□□ -0.08
PACRGL-220ENST00000508952 RMI2Q96E14 147 aa14.57□□□□□ -0.08
PACRGL-220ENST00000508952 CHCHD7Q9BUK0 85 aa14.57□□□□□ -0.08
PACRGL-220ENST00000508952 TPPP3Q9BW30 176 aa14.57□□□□□ -0.08
PACRGL-220ENST00000508952 COX11Q9Y6N1 276 aa14.57□□□□□ -0.08
PACRGL-220ENST00000508952 KIF25-AS1Q9Y6Z4 181 aa14.57□□□□□ -0.08
PACRGL-220ENST00000508952 SRRM2Q9UQ35 2752 aaKnown RBP14.57□□□□□ -0.08
PACRGL-220ENST00000508952 INAFM2P0DMQ5 153 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms