RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 TNFRSF18Q9Y5U5 241 aa16.55■□□□□ 0.24
PROM1-209ENST00000508940 CENPWQ5EE01 88 aa16.54■□□□□ 0.24
PROM1-209ENST00000508940 LELP1Q5T871 98 aa16.54■□□□□ 0.24
PROM1-209ENST00000508940 C14orf178Q8N769 122 aaPredicted RBP16.54■□□□□ 0.24
PROM1-209ENST00000508940 DAZAP1Q96EP5 407 aaKnown RBP16.54■□□□□ 0.24
PROM1-209ENST00000508940 Q6ZRN7 208 aaPredicted RBP16.53■□□□□ 0.24
PROM1-209ENST00000508940 SPATA12Q7Z6I5 190 aa16.53■□□□□ 0.24
PROM1-209ENST00000508940 MED9Q9NWA0 146 aa16.53■□□□□ 0.24
PROM1-209ENST00000508940 VAX2Q9UIW0 290 aa16.53■□□□□ 0.24
PROM1-209ENST00000508940 BCL2P10415 239 aa16.52■□□□□ 0.24
PROM1-209ENST00000508940 TAGLN2P37802 199 aaKnown RBP16.52■□□□□ 0.24
PROM1-209ENST00000508940 RAB19A4D1S5 217 aa16.51■□□□□ 0.23
PROM1-209ENST00000508940 EREGO14944 169 aa16.51■□□□□ 0.23
PROM1-209ENST00000508940 GNG4P50150 75 aa16.51■□□□□ 0.23
PROM1-209ENST00000508940 LINC01556Q5JQF7 62 aa16.5■□□□□ 0.23
PROM1-209ENST00000508940 SPANXN1Q5VSR9 72 aa16.5■□□□□ 0.23
PROM1-209ENST00000508940 OR10AG1Q8NH19 301 aa16.5■□□□□ 0.23
PROM1-209ENST00000508940 BLOC1S1P78537 153 aa16.49■□□□□ 0.23
PROM1-209ENST00000508940 SMIM12Q96EX1 92 aa16.49■□□□□ 0.23
PROM1-209ENST00000508940 PKHD1P08F94 4074 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 SNAI2O43623 268 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 OR5AL1P0C617 328 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 LINC00694P0DN24 101 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 ERVFC1-1P60608 527 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 ALKAL2Q6UX46 152 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 SSBP4Q9BWG4 385 aaPredicted RBP16.48■□□□□ 0.23
PROM1-209ENST00000508940 BIN3Q9NQY0 253 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 Q9UF83 564 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 PKD1P98161 4303 aa16.48■□□□□ 0.23
PROM1-209ENST00000508940 IGHV3-30P01768 117 aa16.47■□□□□ 0.23
PROM1-209ENST00000508940 IGHV3-33P01772 117 aa16.47■□□□□ 0.23
PROM1-209ENST00000508940 IGHV3-30-3P0DP02 117 aa16.47■□□□□ 0.23
PROM1-209ENST00000508940 IGHV3-30-5P0DP03 117 aa16.47■□□□□ 0.23
PROM1-209ENST00000508940 RPS20P60866 119 aaKnown RBP16.47■□□□□ 0.23
PROM1-209ENST00000508940 A0A087WWC5 75 aa16.46■□□□□ 0.23
PROM1-209ENST00000508940 MUC21A0A0G2JKD1 596 aa16.46■□□□□ 0.23
PROM1-209ENST00000508940 MUC21A0A140T8X8 626 aa16.46■□□□□ 0.23
PROM1-209ENST00000508940 IGLV2-8P01709 118 aa16.46■□□□□ 0.23
PROM1-209ENST00000508940 SSTP61278 116 aa16.46■□□□□ 0.23
PROM1-209ENST00000508940 OR2D3Q8NGH3 330 aa16.46■□□□□ 0.23
PROM1-209ENST00000508940 TRBV10-1A0A0K0K1A3 114 aa16.45■□□□□ 0.22
PROM1-209ENST00000508940 RAB4BP61018 213 aa16.45■□□□□ 0.22
PROM1-209ENST00000508940 RPL36AP83881 106 aaKnown RBP16.45■□□□□ 0.22
PROM1-209ENST00000508940 ZNF56Q15929 161 aa16.45■□□□□ 0.22
PROM1-209ENST00000508940 RPL36ALQ969Q0 106 aaKnown RBP16.45■□□□□ 0.22
PROM1-209ENST00000508940 XKRY2A2RUG3 117 aa16.44■□□□□ 0.22
PROM1-209ENST00000508940 P01737 135 aa16.44■□□□□ 0.22
PROM1-209ENST00000508940 IBA57-AS1B1ANH7 110 aa16.43■□□□□ 0.22
PROM1-209ENST00000508940 PSCAO43653 123 aa16.43■□□□□ 0.22
PROM1-209ENST00000508940 SMIM17P0DL12 118 aa16.43■□□□□ 0.22
PROM1-209ENST00000508940 KRTAP10-2P60368 255 aa16.43■□□□□ 0.22
PROM1-209ENST00000508940 TPPP3Q9BW30 176 aa16.43■□□□□ 0.22
PROM1-209ENST00000508940 C19orf71A6NCJ1 209 aa16.42■□□□□ 0.22
PROM1-209ENST00000508940 F5H697 171 aa16.42■□□□□ 0.22
PROM1-209ENST00000508940 FER1L6-AS1Q8NA97 138 aa16.42■□□□□ 0.22
PROM1-209ENST00000508940 A0A1B0GVG6 124 aa16.41■□□□□ 0.22
PROM1-209ENST00000508940 GZMBP10144 247 aa16.41■□□□□ 0.22
PROM1-209ENST00000508940 NKX2-5P52952 324 aaPredicted RBP16.41■□□□□ 0.22
PROM1-209ENST00000508940 PGPEP1Q9NXJ5 209 aa16.41■□□□□ 0.22
PROM1-209ENST00000508940 TRBV20OR9-2A0A075B6H5 130 aa16.4■□□□□ 0.22
PROM1-209ENST00000508940 TRBV7-3A0A075B6L6 115 aa16.4■□□□□ 0.22
PROM1-209ENST00000508940 AP1S3Q96PC3 154 aa16.4■□□□□ 0.22
PROM1-209ENST00000508940 Q9HAA7 133 aa16.4■□□□□ 0.22
PROM1-209ENST00000508940 A0A087WTM6 91 aa16.39■□□□□ 0.21
PROM1-209ENST00000508940 RBFOX3A6NFN3 312 aa16.39■□□□□ 0.21
PROM1-209ENST00000508940 URGCP-MRPS24S4R325 110 aa16.39■□□□□ 0.21
PROM1-209ENST00000508940 IGLC6P0CF74 106 aa16.38■□□□□ 0.21
PROM1-209ENST00000508940 UBE2D3P61077 147 aa16.38■□□□□ 0.21
PROM1-209ENST00000508940 UBE2D2P62837 147 aa16.38■□□□□ 0.21
PROM1-209ENST00000508940 CACNG7P62955 275 aa16.38■□□□□ 0.21
PROM1-209ENST00000508940 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.38■□□□□ 0.21
PROM1-209ENST00000508940 DYNC1H1Q14204 4646 aaKnown RBP16.38■□□□□ 0.21
PROM1-209ENST00000508940 DNAH11Q96DT5 4516 aa16.38■□□□□ 0.21
PROM1-209ENST00000508940 HERC2O95714 4834 aa16.37■□□□□ 0.21
PROM1-209ENST00000508940 F2Z2F3 143 aa16.37■□□□□ 0.21
PROM1-209ENST00000508940 LAGE3Q14657 143 aa16.37■□□□□ 0.21
PROM1-209ENST00000508940 OR10G8Q8NGN5 311 aa16.37■□□□□ 0.21
PROM1-209ENST00000508940 KIAA1109Q2LD37 5005 aa16.36■□□□□ 0.21
PROM1-209ENST00000508940 NEXN-AS1Q8NBZ9 246 aa16.36■□□□□ 0.21
PROM1-209ENST00000508940 NUDT10Q8NFP7 164 aa16.36■□□□□ 0.21
PROM1-209ENST00000508940 LYPD6BQ8NI32 183 aa16.36■□□□□ 0.21
PROM1-209ENST00000508940 NUDT11Q96G61 164 aa16.36■□□□□ 0.21
PROM1-209ENST00000508940 TMEM250H0YL14 139 aa16.35■□□□□ 0.21
PROM1-209ENST00000508940 CDK2AP2O75956 126 aa16.35■□□□□ 0.21
PROM1-209ENST00000508940 TOR2AQ5JU69 321 aa16.35■□□□□ 0.21
PROM1-209ENST00000508940 KCNIP4Q6PIL6 250 aa16.35■□□□□ 0.21
PROM1-209ENST00000508940 OCC1Q8TAD7 63 aa16.35■□□□□ 0.21
PROM1-209ENST00000508940 MGPP08493 103 aa16.34■□□□□ 0.21
PROM1-209ENST00000508940 CDPF1Q6NVV7 123 aa16.34■□□□□ 0.21
PROM1-209ENST00000508940 DAZ4Q86SG3 579 aaKnown RBP16.34■□□□□ 0.21
PROM1-209ENST00000508940 Q8N3U1 123 aa16.34■□□□□ 0.21
PROM1-209ENST00000508940 TM2D2Q9BX73 214 aa16.34■□□□□ 0.21
PROM1-209ENST00000508940 DAZ3Q9NR90 486 aaKnown RBP16.34■□□□□ 0.21
PROM1-209ENST00000508940 TRAV8-3A0A0A6YYJ7 113 aa16.33■□□□□ 0.2
PROM1-209ENST00000508940 LYZL1Q6UWQ5 148 aa16.33■□□□□ 0.2
PROM1-209ENST00000508940 EIF5A2Q9GZV4 153 aaKnown RBP16.33■□□□□ 0.2
PROM1-209ENST00000508940 KIF25-AS1Q9Y6Z4 181 aa16.33■□□□□ 0.2
PROM1-209ENST00000508940 FUSP35637 526 aaKnown RBP eCLIP16.32■□□□□ 0.2
PROM1-209ENST00000508940 CEBPGP53567 150 aa16.32■□□□□ 0.2
PROM1-209ENST00000508940 NIT1Q86X76 327 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms