RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 APOC3P02656 99 aa14.15□□□□□ -0.14
USP53-203ENST00000507597 POM121L12Q8N7R1 296 aa14.15□□□□□ -0.14
USP53-203ENST00000507597 MUC21A0A0G2JKD1 596 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 MUC21A0A140T8X8 626 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 A0A1B0GW15 77 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 PAX4O43316 350 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 S100A8P05109 93 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 FHL2Q14192 279 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 CASC10Q5T4H9 136 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 FAM74A4Q5TZK3 123 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 KCNIP4Q6PIL6 250 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 SLC7A5P1Q8MH63 180 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 CLRN3Q8NCR9 226 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 IMMP2LQ96T52 175 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 PRADC1Q9BSG0 188 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 TMEM242Q9NWH2 141 aa14.14□□□□□ -0.15
USP53-203ENST00000507597 TRBV6-4A0A1B0GX49 114 aa14.13□□□□□ -0.15
USP53-203ENST00000507597 S100PP25815 95 aa14.13□□□□□ -0.15
USP53-203ENST00000507597 TMEM88Q6PEY1 159 aa14.13□□□□□ -0.15
USP53-203ENST00000507597 NUP35Q8NFH5 326 aa14.13□□□□□ -0.15
USP53-203ENST00000507597 TRAV26-1A0A087WT03 109 aa14.12□□□□□ -0.15
USP53-203ENST00000507597 A0A087WWC5 75 aa14.12□□□□□ -0.15
USP53-203ENST00000507597 HOXA5P20719 270 aa14.12□□□□□ -0.15
USP53-203ENST00000507597 RHOHQ15669 191 aa14.12□□□□□ -0.15
USP53-203ENST00000507597 DPH3P1Q9H4G8 78 aa14.12□□□□□ -0.15
USP53-203ENST00000507597 MUC4Q99102 2169 aa14.12□□□□□ -0.15
USP53-203ENST00000507597 A0A087WWL8 130 aa14.11□□□□□ -0.15
USP53-203ENST00000507597 CRYGDP07320 174 aa14.11□□□□□ -0.15
USP53-203ENST00000507597 GATA1P15976 413 aaPredicted RBP14.11□□□□□ -0.15
USP53-203ENST00000507597 CRYBA4P53673 196 aa14.11□□□□□ -0.15
USP53-203ENST00000507597 RAB4BP61018 213 aa14.11□□□□□ -0.15
USP53-203ENST00000507597 C14orf178Q8N769 122 aaPredicted RBP14.11□□□□□ -0.15
USP53-203ENST00000507597 JPT2Q9H910 190 aa14.11□□□□□ -0.15
USP53-203ENST00000507597 RPS10P5Q9NQ39 176 aa14.11□□□□□ -0.15
USP53-203ENST00000507597 IGHV3-73A0A0B4J1V6 119 aa14.1□□□□□ -0.15
USP53-203ENST00000507597 C7orf77A4D0Y5 90 aa14.1□□□□□ -0.15
USP53-203ENST00000507597 F5H697 171 aa14.1□□□□□ -0.15
USP53-203ENST00000507597 ZNF56Q15929 161 aa14.1□□□□□ -0.15
USP53-203ENST00000507597 SH2D6Q7Z4S9 175 aa14.1□□□□□ -0.15
USP53-203ENST00000507597 H7C1H1 209 aa14.09□□□□□ -0.15
USP53-203ENST00000507597 MRPL23Q16540 153 aaKnown RBP14.09□□□□□ -0.15
USP53-203ENST00000507597 ATP5L2Q7Z4Y8 100 aa14.09□□□□□ -0.15
USP53-203ENST00000507597 SAMD10Q9BYL1 202 aa14.09□□□□□ -0.15
USP53-203ENST00000507597 ICOSQ9Y6W8 199 aa14.09□□□□□ -0.15
USP53-203ENST00000507597 A0A0J9YY99 117 aa14.08□□□□□ -0.16
USP53-203ENST00000507597 K7EQD1 137 aa14.08□□□□□ -0.16
USP53-203ENST00000507597 NUDT3O95989 172 aa14.08□□□□□ -0.16
USP53-203ENST00000507597 UFSP1Q6NVU6 142 aa14.08□□□□□ -0.16
USP53-203ENST00000507597 BTF3L4Q96K17 158 aa14.08□□□□□ -0.16
USP53-203ENST00000507597 MSRB1Q9NZV6 116 aa14.08□□□□□ -0.16
USP53-203ENST00000507597 TRAV9-1A0A075B6T8 112 aa14.07□□□□□ -0.16
USP53-203ENST00000507597 TRBV10-1A0A0K0K1A3 114 aa14.07□□□□□ -0.16
USP53-203ENST00000507597 MGPP08493 103 aa14.07□□□□□ -0.16
USP53-203ENST00000507597 EVI2AP22794 236 aa14.07□□□□□ -0.16
USP53-203ENST00000507597 SLC25A29Q8N8R3 303 aa14.07□□□□□ -0.16
USP53-203ENST00000507597 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.07□□□□□ -0.16
USP53-203ENST00000507597 FRZBQ92765 325 aa14.07□□□□□ -0.16
USP53-203ENST00000507597 TMEM191AQ9H0A3 160 aa14.07□□□□□ -0.16
USP53-203ENST00000507597 HBBP68871 147 aa14.06□□□□□ -0.16
USP53-203ENST00000507597 GYPEP15421 78 aa14.05□□□□□ -0.16
USP53-203ENST00000507597 SRIP30626 198 aa14.05□□□□□ -0.16
USP53-203ENST00000507597 FAM3BP58499 235 aaPredicted RBP14.05□□□□□ -0.16
USP53-203ENST00000507597 APLNQ9ULZ1 77 aa14.05□□□□□ -0.16
USP53-203ENST00000507597 KIF25-AS1Q9Y6Z4 181 aa14.05□□□□□ -0.16
USP53-203ENST00000507597 RPL36AP83881 106 aaKnown RBP14.04□□□□□ -0.16
USP53-203ENST00000507597 RPL36ALQ969Q0 106 aaKnown RBP14.04□□□□□ -0.16
USP53-203ENST00000507597 VSIG2Q96IQ7 327 aa14.04□□□□□ -0.16
USP53-203ENST00000507597 P0DMU3 169 aa14.03□□□□□ -0.16
USP53-203ENST00000507597 FAM231AP0DMU4 169 aa14.03□□□□□ -0.16
USP53-203ENST00000507597 FAM231CP0DMU5 169 aa14.03□□□□□ -0.16
USP53-203ENST00000507597 CAMPP49913 170 aa14.03□□□□□ -0.16
USP53-203ENST00000507597 MRPL54Q6P161 138 aaKnown RBP14.03□□□□□ -0.16
USP53-203ENST00000507597 RASL11AQ6T310 242 aa14.03□□□□□ -0.16
USP53-203ENST00000507597 NEGR1Q7Z3B1 354 aa14.02□□□□□ -0.17
USP53-203ENST00000507597 CCL18P55774 89 aa14.01□□□□□ -0.17
USP53-203ENST00000507597 COX19Q49B96 90 aa14.01□□□□□ -0.17
USP53-203ENST00000507597 DNAJC30Q96LL9 226 aa14.01□□□□□ -0.17
USP53-203ENST00000507597 A0A096LPF7 62 aa14□□□□□ -0.17
USP53-203ENST00000507597 PPP1R17O96001 155 aa14□□□□□ -0.17
USP53-203ENST00000507597 TNFRSF18Q9Y5U5 241 aa14□□□□□ -0.17
USP53-203ENST00000507597 TRBV7-3A0A075B6L6 115 aa13.99□□□□□ -0.17
USP53-203ENST00000507597 LINC00315P59091 139 aa13.99□□□□□ -0.17
USP53-203ENST00000507597 MRAP2Q96G30 205 aa13.99□□□□□ -0.17
USP53-203ENST00000507597 DNAH7Q8WXX0 4024 aa13.99□□□□□ -0.17
USP53-203ENST00000507597 A0A1B0GXF2 115 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 GAGE12JA6NER3 117 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 GAGE1Q13065 139 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 GAGE4Q13068 117 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 GAGE5Q13069 117 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 GAGE13Q4V321 117 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 SUMO4Q6EEV6 95 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 Q6ZSN1 163 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 UBE2DNLQ8IWF7 75 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 URGCP-MRPS24S4R325 110 aa13.98□□□□□ -0.17
USP53-203ENST00000507597 FAM104BQ5XKR9 115 aa13.97□□□□□ -0.17
USP53-203ENST00000507597 LGALS9CQ6DKI2 356 aa13.97□□□□□ -0.17
USP53-203ENST00000507597 GATD1Q8NB37 220 aa13.97□□□□□ -0.17
USP53-203ENST00000507597 ATP6V0E2Q8NHE4 81 aa13.97□□□□□ -0.17
USP53-203ENST00000507597 ZNRF2Q8NHG8 242 aa13.97□□□□□ -0.17
USP53-203ENST00000507597 NIT2Q9NQR4 276 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms