RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SFTA3P0C7M3 94 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 SMIM17P0DL12 118 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 GATA1P15976 413 aaPredicted RBP5.95□□□□□ -1.46
PDGFC-205ENST00000506880 CRYBA4P53673 196 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 RAB4BP61018 213 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 RPL23P62829 140 aaKnown RBP5.95□□□□□ -1.46
PDGFC-205ENST00000506880 TMEM97Q5BJF2 176 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 ATP5L2Q7Z4Y8 100 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 ZNF575Q86XF7 245 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 OR10G8Q8NGN5 311 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 PCNPQ8WW12 178 aaKnown RBP5.95□□□□□ -1.46
PDGFC-205ENST00000506880 CTDSP1Q9GZU7 261 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 APLNQ9ULZ1 77 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 ICOSQ9Y6W8 199 aa5.95□□□□□ -1.46
PDGFC-205ENST00000506880 IGLL5B9A064 214 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 PAX4O43316 350 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 IGHV3-53P01767 116 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 CEBPGP53567 150 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 CCL18P55774 89 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 FHL2Q14192 279 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 C10orf91Q5T1B1 145 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 UFSP1Q6NVU6 142 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 RASL11AQ6T310 242 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 Q6ZQT7 251 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 UPK3BQ9BT76 320 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 MRPL16Q9NX20 251 aaKnown RBP5.94□□□□□ -1.46
PDGFC-205ENST00000506880 NAT8BQ9UHF3 227 aa5.94□□□□□ -1.46
PDGFC-205ENST00000506880 DYNC2H1Q8NCM8 4307 aaKnown RBP5.93□□□□□ -1.46
PDGFC-205ENST00000506880 A0A087WWC5 75 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 A0A1B0GUT8 65 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 SMIM27A0A1W2PRY6 76 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 C9JQL5 133 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 PRM2P04554 102 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 PRB4P10163 310 aaPredicted RBP5.93□□□□□ -1.46
PDGFC-205ENST00000506880 PKIAP61925 76 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 RIGQ13278 110 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 ADIRFQ15847 76 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 TMEM88Q6PEY1 159 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 POM121L12Q8N7R1 296 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 DNAJC30Q96LL9 226 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 RNASE7Q9H1E1 156 aaKnown RBP5.93□□□□□ -1.46
PDGFC-205ENST00000506880 DPH3P1Q9H4G8 78 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 CARHSP1Q9Y2V2 147 aaKnown RBP5.93□□□□□ -1.46
PDGFC-205ENST00000506880 V9GYV3 84 aa5.93□□□□□ -1.46
PDGFC-205ENST00000506880 LCE6AA0A183 80 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 HIGD1CA8MV81 97 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 K7EQD1 137 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 CRYGDP07320 174 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 SRSF3P84103 164 aaKnown RBP5.92□□□□□ -1.46
PDGFC-205ENST00000506880 RHEBQ15382 184 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 COX19Q49B96 90 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 NEGR1Q7Z3B1 354 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 COMMD7Q86VX2 200 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 OR10AG1Q8NH19 301 aa5.92□□□□□ -1.46
PDGFC-205ENST00000506880 GRIFINA4D1Z8 144 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 F8W036 122 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 M0R381 172 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 HOXA5P20719 270 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 NTF3P20783 257 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 SRIP30626 198 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 RPL36AP83881 106 aaKnown RBP5.91□□□□□ -1.46
PDGFC-205ENST00000506880 ZFAND6Q6FIF0 208 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 LYZL1Q6UWQ5 148 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 LINC00476Q8WZB0 136 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 RPL36ALQ969Q0 106 aaKnown RBP5.91□□□□□ -1.46
PDGFC-205ENST00000506880 ZNF479Q96JC4 524 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 TMEM191AQ9H0A3 160 aa5.91□□□□□ -1.46
PDGFC-205ENST00000506880 TRBV7-3A0A075B6L6 115 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 TMSB15BA0A087X1C1 80 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 TCAPO15273 167 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 HTN3P15516 51 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 TTC32Q5I0X7 151 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 KCNIP4Q6PIL6 250 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 DAZ4Q86SG3 579 aaKnown RBP5.9□□□□□ -1.46
PDGFC-205ENST00000506880 SVBPQ8N300 66 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 SLC25A29Q8N8R3 303 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 GATD1Q8NB37 220 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 GTSF1Q8WW33 167 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 VSIG2Q96IQ7 327 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 CHCHD7Q9BUK0 85 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 DAZ3Q9NR90 486 aaKnown RBP5.9□□□□□ -1.46
PDGFC-205ENST00000506880 MRPS16Q9Y3D3 137 aaKnown RBP5.9□□□□□ -1.46
PDGFC-205ENST00000506880 KIF25-AS1Q9Y6Z4 181 aa5.9□□□□□ -1.46
PDGFC-205ENST00000506880 A0A096LPF7 62 aa5.89□□□□□ -1.47
PDGFC-205ENST00000506880 SNAPINO95295 136 aa5.89□□□□□ -1.47
PDGFC-205ENST00000506880 PPBPP02775 128 aa5.89□□□□□ -1.47
PDGFC-205ENST00000506880 LINC00694P0DN24 101 aa5.89□□□□□ -1.47
PDGFC-205ENST00000506880 GYPEP15421 78 aa5.89□□□□□ -1.47
PDGFC-205ENST00000506880 TWIST1Q15672 202 aa5.89□□□□□ -1.47
PDGFC-205ENST00000506880 MRAP2Q96G30 205 aa5.89□□□□□ -1.47
PDGFC-205ENST00000506880 LAMTOR2Q9Y2Q5 125 aa5.89□□□□□ -1.47
PDGFC-205ENST00000506880 TRAV9-2A0A087WT02 112 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 PHOX2AO14813 284 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 S100PP25815 95 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 HBBP68871 147 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 C4orf48Q5BLP8 95 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 C10orf126Q8N4M7 172 aa5.88□□□□□ -1.47
PDGFC-205ENST00000506880 NUP35Q8NFH5 326 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms