RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 FAM231DQ6ZW35 169 aa11.66□□□□□ -0.54
SYNE4-207ENST00000505054 UBE2DNLQ8IWF7 75 aa11.66□□□□□ -0.54
SYNE4-207ENST00000505054 FER1L6-AS1Q8NA97 138 aa11.66□□□□□ -0.54
SYNE4-207ENST00000505054 SFRP2Q96HF1 295 aa11.66□□□□□ -0.54
SYNE4-207ENST00000505054 RPP21Q9H633 154 aaKnown RBP11.66□□□□□ -0.54
SYNE4-207ENST00000505054 ICOSQ9Y6W8 199 aa11.66□□□□□ -0.54
SYNE4-207ENST00000505054 PKD1P98161 4303 aa11.66□□□□□ -0.54
SYNE4-207ENST00000505054 M0R2N4 97 aa11.65□□□□□ -0.54
SYNE4-207ENST00000505054 GYPEP15421 78 aa11.65□□□□□ -0.54
SYNE4-207ENST00000505054 Q6ZSN1 163 aa11.65□□□□□ -0.54
SYNE4-207ENST00000505054 SLC25A29Q8N8R3 303 aa11.65□□□□□ -0.54
SYNE4-207ENST00000505054 A0A087WWL8 130 aa11.64□□□□□ -0.55
SYNE4-207ENST00000505054 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
SYNE4-207ENST00000505054 XKRY2A2RUG3 117 aa11.64□□□□□ -0.55
SYNE4-207ENST00000505054 K7EQD1 137 aa11.64□□□□□ -0.55
SYNE4-207ENST00000505054 FAM74A3Q4VXF1 159 aa11.64□□□□□ -0.55
SYNE4-207ENST00000505054 TPPP3Q9BW30 176 aa11.64□□□□□ -0.55
SYNE4-207ENST00000505054 LINC00588Q9Y4M8 146 aa11.64□□□□□ -0.55
SYNE4-207ENST00000505054 TRBV6-4A0A1B0GX49 114 aa11.63□□□□□ -0.55
SYNE4-207ENST00000505054 RHODO00212 210 aa11.63□□□□□ -0.55
SYNE4-207ENST00000505054 CRYGDP07320 174 aa11.63□□□□□ -0.55
SYNE4-207ENST00000505054 ESRGQ1W209 222 aa11.63□□□□□ -0.55
SYNE4-207ENST00000505054 TMEM241Q24JQ0 296 aa11.63□□□□□ -0.55
SYNE4-207ENST00000505054 FAM74A4Q5TZK3 123 aa11.63□□□□□ -0.55
SYNE4-207ENST00000505054 SPANXN1Q5VSR9 72 aa11.63□□□□□ -0.55
SYNE4-207ENST00000505054 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
SYNE4-207ENST00000505054 CCL18P55774 89 aa11.62□□□□□ -0.55
SYNE4-207ENST00000505054 ERVFC1-1P60608 527 aa11.62□□□□□ -0.55
SYNE4-207ENST00000505054 SSTP61278 116 aa11.62□□□□□ -0.55
SYNE4-207ENST00000505054 RPL23P62829 140 aaKnown RBP11.62□□□□□ -0.55
SYNE4-207ENST00000505054 RHOHQ15669 191 aa11.62□□□□□ -0.55
SYNE4-207ENST00000505054 MRPL23Q16540 153 aaKnown RBP11.62□□□□□ -0.55
SYNE4-207ENST00000505054 SOHLH1Q5JUK2 328 aa11.62□□□□□ -0.55
SYNE4-207ENST00000505054 A0A1W2PPQ1 181 aa11.61□□□□□ -0.55
SYNE4-207ENST00000505054 CTRLP40313 264 aa11.61□□□□□ -0.55
SYNE4-207ENST00000505054 FAM3BP58499 235 aaPredicted RBP11.61□□□□□ -0.55
SYNE4-207ENST00000505054 LYZL1Q6UWQ5 148 aa11.61□□□□□ -0.55
SYNE4-207ENST00000505054 Q6ZR54 194 aa11.61□□□□□ -0.55
SYNE4-207ENST00000505054 GTSF1Q8WW33 167 aa11.61□□□□□ -0.55
SYNE4-207ENST00000505054 ISOC2Q96AB3 205 aa11.61□□□□□ -0.55
SYNE4-207ENST00000505054 NAT8Q9UHE5 227 aa11.61□□□□□ -0.55
SYNE4-207ENST00000505054 F2Z2F3 143 aa11.6□□□□□ -0.55
SYNE4-207ENST00000505054 SRIP30626 198 aa11.6□□□□□ -0.55
SYNE4-207ENST00000505054 CT83Q5H943 113 aa11.6□□□□□ -0.55
SYNE4-207ENST00000505054 C14orf178Q8N769 122 aaPredicted RBP11.6□□□□□ -0.55
SYNE4-207ENST00000505054 ZNRF2Q8NHG8 242 aa11.6□□□□□ -0.55
SYNE4-207ENST00000505054 PRADC1Q9BSG0 188 aa11.6□□□□□ -0.55
SYNE4-207ENST00000505054 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
SYNE4-207ENST00000505054 MSRB1Q9NZV6 116 aa11.6□□□□□ -0.55
SYNE4-207ENST00000505054 IGLV2-18A0A075B6J9 118 aa11.59□□□□□ -0.55
SYNE4-207ENST00000505054 CACNG7P62955 275 aa11.59□□□□□ -0.55
SYNE4-207ENST00000505054 ADIRFQ15847 76 aa11.59□□□□□ -0.55
SYNE4-207ENST00000505054 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
SYNE4-207ENST00000505054 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
SYNE4-207ENST00000505054 Q9UF83 564 aa11.59□□□□□ -0.55
SYNE4-207ENST00000505054 MRPS16Q9Y3D3 137 aaKnown RBP11.59□□□□□ -0.55
SYNE4-207ENST00000505054 LYPD5Q6UWN5 251 aa11.58□□□□□ -0.56
SYNE4-207ENST00000505054 CNFNQ9BYD5 112 aa11.58□□□□□ -0.56
SYNE4-207ENST00000505054 KIF25-AS1Q9Y6Z4 181 aa11.58□□□□□ -0.56
SYNE4-207ENST00000505054 V9GYV3 84 aa11.58□□□□□ -0.56
SYNE4-207ENST00000505054 A8MWL6 223 aa11.57□□□□□ -0.56
SYNE4-207ENST00000505054 LINC00694P0DN24 101 aa11.57□□□□□ -0.56
SYNE4-207ENST00000505054 LINC00315P59091 139 aa11.57□□□□□ -0.56
SYNE4-207ENST00000505054 UPK3BQ9BT76 320 aa11.57□□□□□ -0.56
SYNE4-207ENST00000505054 NTF3P20783 257 aa11.56□□□□□ -0.56
SYNE4-207ENST00000505054 WDR73Q6P4I2 378 aa11.56□□□□□ -0.56
SYNE4-207ENST00000505054 C15orf54Q8N8G6 183 aa11.56□□□□□ -0.56
SYNE4-207ENST00000505054 TSKUQ8WUA8 353 aa11.56□□□□□ -0.56
SYNE4-207ENST00000505054 KRTAP4-5Q9BYR2 181 aa11.56□□□□□ -0.56
SYNE4-207ENST00000505054 GAGE12JA6NER3 117 aa11.55□□□□□ -0.56
SYNE4-207ENST00000505054 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
SYNE4-207ENST00000505054 GAGE1Q13065 139 aa11.55□□□□□ -0.56
SYNE4-207ENST00000505054 GAGE4Q13068 117 aa11.55□□□□□ -0.56
SYNE4-207ENST00000505054 GAGE5Q13069 117 aa11.55□□□□□ -0.56
SYNE4-207ENST00000505054 ZNF56Q15929 161 aa11.55□□□□□ -0.56
SYNE4-207ENST00000505054 GAGE13Q4V321 117 aa11.55□□□□□ -0.56
SYNE4-207ENST00000505054 SH2D6Q7Z4S9 175 aa11.55□□□□□ -0.56
SYNE4-207ENST00000505054 HSPG2P98160 4391 aa11.55□□□□□ -0.56
SYNE4-207ENST00000505054 EVI2AP22794 236 aa11.54□□□□□ -0.56
SYNE4-207ENST00000505054 RAB4BP61018 213 aa11.54□□□□□ -0.56
SYNE4-207ENST00000505054 C1orf134Q5TEV5 83 aa11.54□□□□□ -0.56
SYNE4-207ENST00000505054 OR10G8Q8NGN5 311 aa11.54□□□□□ -0.56
SYNE4-207ENST00000505054 PGLYRP4Q96LB8 373 aa11.54□□□□□ -0.56
SYNE4-207ENST00000505054 GFRA4Q9GZZ7 299 aa11.54□□□□□ -0.56
SYNE4-207ENST00000505054 HIGD1CA8MV81 97 aa11.53□□□□□ -0.56
SYNE4-207ENST00000505054 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
SYNE4-207ENST00000505054 SMIM17P0DL12 118 aa11.53□□□□□ -0.56
SYNE4-207ENST00000505054 TIRAPP58753 221 aa11.53□□□□□ -0.56
SYNE4-207ENST00000505054 TWIST1Q15672 202 aa11.53□□□□□ -0.56
SYNE4-207ENST00000505054 Q9H8V8 135 aa11.53□□□□□ -0.56
SYNE4-207ENST00000505054 TRBV10-1A0A0K0K1A3 114 aa11.52□□□□□ -0.57
SYNE4-207ENST00000505054 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
SYNE4-207ENST00000505054 UQCC3Q6UW78 93 aa11.52□□□□□ -0.57
SYNE4-207ENST00000505054 ATP6V0E2Q8NHE4 81 aa11.52□□□□□ -0.57
SYNE4-207ENST00000505054 NBDYA0A0U1RRE5 68 aa11.51□□□□□ -0.57
SYNE4-207ENST00000505054 F5H697 171 aa11.51□□□□□ -0.57
SYNE4-207ENST00000505054 MGPP08493 103 aa11.51□□□□□ -0.57
SYNE4-207ENST00000505054 COMMD7Q86VX2 200 aa11.51□□□□□ -0.57
SYNE4-207ENST00000505054 LINC00862A6NCI5 91 aa11.5□□□□□ -0.57
SYNE4-207ENST00000505054 CDK2AP2O75956 126 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms