RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MALP21145 153 aa7.45□□□□□ -1.22
TPM3-217ENST00000504663 DEFB135Q30KP9 77 aa7.45□□□□□ -1.22
TPM3-217ENST00000504663 ALKBH7Q9BT30 221 aaPredicted RBP7.45□□□□□ -1.22
TPM3-217ENST00000504663 SAMD10Q9BYL1 202 aa7.45□□□□□ -1.22
TPM3-217ENST00000504663 PHLDA3Q9Y5J5 127 aa7.45□□□□□ -1.22
TPM3-217ENST00000504663 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 PRB2P02812 416 aaPredicted RBP7.44□□□□□ -1.22
TPM3-217ENST00000504663 S100A8P05109 93 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 CRYGDP07320 174 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 HTN1P15515 57 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 APOC4P55056 127 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 RAB4BP61018 213 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
TPM3-217ENST00000504663 PIK3CD-AS1Q5SR53 167 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 SPANXN1Q5VSR9 72 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 LINC00612Q8N6U2 182 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 BORCS7Q96B45 105 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 RNF183Q96D59 192 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 URB1-AS1Q96HZ7 61 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 OVOL2Q9BRP0 275 aa7.44□□□□□ -1.22
TPM3-217ENST00000504663 DYNC2H1Q8NCM8 4307 aaKnown RBP7.43□□□□□ -1.22
TPM3-217ENST00000504663 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 M0R2P5 195 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 UBE2CO00762 179 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 GATA1P15976 413 aaPredicted RBP7.43□□□□□ -1.22
TPM3-217ENST00000504663 SRIP30626 198 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 RAB5BP61020 215 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 DAZ2Q13117 558 aaKnown RBP7.43□□□□□ -1.22
TPM3-217ENST00000504663 NRACQ8N912 160 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 Q8NAQ8 132 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 C18orf32Q8TCD1 76 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 C16orf74Q96GX8 76 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 AP1S3Q96PC3 154 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 RCHY1Q96PM5 261 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 SPXQ9BT56 116 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 TMEM208Q9BTX3 173 aa7.43□□□□□ -1.22
TPM3-217ENST00000504663 MRPL16Q9NX20 251 aaKnown RBP7.43□□□□□ -1.22
TPM3-217ENST00000504663 ZMAT5Q9UDW3 170 aaKnown RBP7.43□□□□□ -1.22
TPM3-217ENST00000504663 RS1O15537 224 aa7.42□□□□□ -1.22
TPM3-217ENST00000504663 NCR2O95944 276 aa7.42□□□□□ -1.22
TPM3-217ENST00000504663 IQCJQ1A5X6 159 aa7.42□□□□□ -1.22
TPM3-217ENST00000504663 RRN3P1Q2M238 152 aa7.42□□□□□ -1.22
TPM3-217ENST00000504663 Q6ZWC4 215 aa7.42□□□□□ -1.22
TPM3-217ENST00000504663 C14orf178Q8N769 122 aaPredicted RBP7.42□□□□□ -1.22
TPM3-217ENST00000504663 RASL10AQ92737 203 aa7.42□□□□□ -1.22
TPM3-217ENST00000504663 DPH3P1Q9H4G8 78 aa7.42□□□□□ -1.22
TPM3-217ENST00000504663 RETNQ9HD89 108 aa7.42□□□□□ -1.22
TPM3-217ENST00000504663 A0A087WWL8 130 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 TRAV26-2A0A0B4J265 109 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 C5orf52A6NGY3 159 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 IFITM10A6NMD0 228 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 D6R8Y8 96 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 H3BS24 57 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 NUPR1O60356 82 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 NPYP01303 97 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 Q0VG73 95 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 ZNF876PQ49A33 203 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 CFAP126Q5VTH2 177 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 Q6ZTI0 123 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 NDUFAF3Q9BU61 184 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 EDA2RQ9HAV5 297 aa7.41□□□□□ -1.22
TPM3-217ENST00000504663 IGHV4-28A0A0C4DH34 117 aa7.4□□□□□ -1.22
TPM3-217ENST00000504663 SMIM9A6NGZ8 99 aa7.4□□□□□ -1.22
TPM3-217ENST00000504663 SUMO4Q6EEV6 95 aa7.4□□□□□ -1.22
TPM3-217ENST00000504663 SYT8Q8NBV8 401 aa7.4□□□□□ -1.22
TPM3-217ENST00000504663 NOP10Q9NPE3 64 aaKnown RBP7.4□□□□□ -1.22
TPM3-217ENST00000504663 IGLV2-18A0A075B6J9 118 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 ESDP10768 282 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 LGALS9BQ3B8N2 356 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 OR10J3Q5JRS4 329 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 Q6ZSN1 163 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 SBSPONQ8IVN8 264 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 ORMDL3Q8N138 153 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 OR11H2Q8NH07 326 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 TP53TG1Q9Y2A0 90 aa7.39□□□□□ -1.23
TPM3-217ENST00000504663 TRGV1A0A0A0MS02 117 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 A8MWV9 139 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 M0QY20 66 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 HOXA5P20719 270 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 RPL39LQ96EH5 51 aaKnown RBP7.38□□□□□ -1.23
TPM3-217ENST00000504663 MRAP2Q96G30 205 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 ZNF479Q96JC4 524 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 PRELID3AQ96N28 172 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 C18orf15Q96N68 181 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 TM2D3Q9BRN9 247 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 Q9UF83 564 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 CELA1Q9UNI1 258 aa7.38□□□□□ -1.23
TPM3-217ENST00000504663 MEGF8Q7Z7M0 2845 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 TRAV4A0A0B4J268 109 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 FAM229AH3BQW9 127 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 SERF1AO75920 110 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 SCGB1D1O95968 90 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 PPBPP02775 128 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 MGPP08493 103 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 MIFP14174 115 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 CKS2P33552 79 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 NDUFA6P56556 154 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 SNRPEP62304 92 aaKnown RBP7.37□□□□□ -1.23
TPM3-217ENST00000504663 HIST3H2BBQ8N257 126 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms