RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 NSUN5P1Q3KNT7 163 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 SYT8Q8NBV8 401 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 IGHV3-16A0A0C4DH30 117 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 TMEM89A2RUT3 159 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 CIDEAO60543 219 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 APOMO95445 188 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 IGHV3-30P01768 117 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 IGHV3-30-5P0DP03 117 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 BLCAPP62952 87 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 FOXI1Q12951 378 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 LY6EQ16553 131 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 GTSF1LQ9H1H1 148 aa11.17□□□□□ -0.62
SNF8-203ENST00000504000 M0QY20 66 aa11.15□□□□□ -0.62
SNF8-203ENST00000504000 AMELXQ99217 191 aa11.15□□□□□ -0.62
SNF8-203ENST00000504000 VCX2Q9H322 139 aa11.15□□□□□ -0.62
SNF8-203ENST00000504000 SPTBN1Q01082 2364 aaKnown RBP11.15□□□□□ -0.62
SNF8-203ENST00000504000 F5H697 171 aa11.15□□□□□ -0.63
SNF8-203ENST00000504000 C19orf84I3L1E1 186 aa11.15□□□□□ -0.63
SNF8-203ENST00000504000 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.63
SNF8-203ENST00000504000 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.63
SNF8-203ENST00000504000 TRPT1Q86TN4 253 aaKnown RBP11.15□□□□□ -0.63
SNF8-203ENST00000504000 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.63
SNF8-203ENST00000504000 ZNRF2Q8NHG8 242 aa11.15□□□□□ -0.63
SNF8-203ENST00000504000 JPT2Q9H910 190 aa11.15□□□□□ -0.63
SNF8-203ENST00000504000 HIVEP3Q5T1R4 2406 aa11.14□□□□□ -0.63
SNF8-203ENST00000504000 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
SNF8-203ENST00000504000 IGKV3-7A0A075B6H7 116 aa11.14□□□□□ -0.63
SNF8-203ENST00000504000 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
SNF8-203ENST00000504000 PSMB8P28062 276 aa11.14□□□□□ -0.63
SNF8-203ENST00000504000 C10orf126Q8N4M7 172 aa11.14□□□□□ -0.63
SNF8-203ENST00000504000 EDA2RQ9HAV5 297 aa11.14□□□□□ -0.63
SNF8-203ENST00000504000 ASH1LQ9NR48 2969 aaKnown RBP11.14□□□□□ -0.63
SNF8-203ENST00000504000 A0A087WWL8 130 aa11.13□□□□□ -0.63
SNF8-203ENST00000504000 A0A0J9YX75 114 aa11.13□□□□□ -0.63
SNF8-203ENST00000504000 J3QQQ9 107 aa11.13□□□□□ -0.63
SNF8-203ENST00000504000 SMAGPQ0VAQ4 97 aa11.13□□□□□ -0.63
SNF8-203ENST00000504000 TMEM170BQ5T4T1 132 aa11.13□□□□□ -0.63
SNF8-203ENST00000504000 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
SNF8-203ENST00000504000 M0QXV9 152 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 CFC1BP0CG36 223 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 CFC1P0CG37 223 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
SNF8-203ENST00000504000 CLEC2AQ6UVW9 174 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 Q6ZS46 218 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 MDFICQ9P1T7 246 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 IGF2RP11717 2491 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 SVEP1Q4LDE5 3571 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 ATRXP46100 2492 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 LEPROTO15243 131 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 MSMBP08118 114 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 PSMB2P49721 201 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 TSPEAR-AS2P59090 65 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 PRO1854Q9UHT4 67 aa11.12□□□□□ -0.63
SNF8-203ENST00000504000 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
SNF8-203ENST00000504000 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
SNF8-203ENST00000504000 K7EQG2 157 aa11.11□□□□□ -0.63
SNF8-203ENST00000504000 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
SNF8-203ENST00000504000 SRD5A1P18405 259 aa11.11□□□□□ -0.63
SNF8-203ENST00000504000 GATA3P23771 443 aa11.11□□□□□ -0.63
SNF8-203ENST00000504000 INSL3P51460 131 aa11.11□□□□□ -0.63
SNF8-203ENST00000504000 TEN1Q86WV5 123 aa11.11□□□□□ -0.63
SNF8-203ENST00000504000 C20orf203Q8NBC4 194 aa11.11□□□□□ -0.63
SNF8-203ENST00000504000 CRYBA4P53673 196 aa11.1□□□□□ -0.63
SNF8-203ENST00000504000 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
SNF8-203ENST00000504000 I3L3M4 83 aa11.1□□□□□ -0.63
SNF8-203ENST00000504000 EMP1P54849 157 aa11.1□□□□□ -0.63
SNF8-203ENST00000504000 Q8N1Y9 231 aa11.1□□□□□ -0.63
SNF8-203ENST00000504000 MTURNQ8N3F0 131 aa11.1□□□□□ -0.63
SNF8-203ENST00000504000 PPDPFLQ8WWR9 84 aa11.1□□□□□ -0.63
SNF8-203ENST00000504000 CCL19Q99731 98 aa11.1□□□□□ -0.63
SNF8-203ENST00000504000 A0A1B0GV72 72 aa11.09□□□□□ -0.63
SNF8-203ENST00000504000 P0DMU3 169 aa11.09□□□□□ -0.63
SNF8-203ENST00000504000 FAM231AP0DMU4 169 aa11.09□□□□□ -0.63
SNF8-203ENST00000504000 FAM231CP0DMU5 169 aa11.09□□□□□ -0.63
SNF8-203ENST00000504000 ZNF56Q15929 161 aa11.09□□□□□ -0.63
SNF8-203ENST00000504000 PYGO1Q9Y3Y4 419 aa11.09□□□□□ -0.63
SNF8-203ENST00000504000 A0A0B4J2C4 111 aa11.08□□□□□ -0.64
SNF8-203ENST00000504000 TCL1BO95988 128 aa11.08□□□□□ -0.64
SNF8-203ENST00000504000 FAM74A4Q5TZK3 123 aa11.08□□□□□ -0.64
SNF8-203ENST00000504000 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
SNF8-203ENST00000504000 B4DSR2 109 aa11.08□□□□□ -0.64
SNF8-203ENST00000504000 EDN2P20800 178 aa11.08□□□□□ -0.64
SNF8-203ENST00000504000 LY6DQ14210 128 aa11.08□□□□□ -0.64
SNF8-203ENST00000504000 PRORYQ9H606 182 aa11.08□□□□□ -0.64
SNF8-203ENST00000504000 RHODO00212 210 aa11.07□□□□□ -0.64
SNF8-203ENST00000504000 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
SNF8-203ENST00000504000 CDIP1Q9H305 208 aa11.07□□□□□ -0.64
SNF8-203ENST00000504000 COL6A6A6NMZ7 2263 aa11.07□□□□□ -0.64
SNF8-203ENST00000504000 IGHV4-30-2A0A087WSY4 118 aa11.06□□□□□ -0.64
SNF8-203ENST00000504000 A8MWV9 139 aa11.06□□□□□ -0.64
SNF8-203ENST00000504000 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
SNF8-203ENST00000504000 PIK3CD-AS1Q5SR53 167 aa11.06□□□□□ -0.64
SNF8-203ENST00000504000 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms