RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 K7EQM0 130 aa9.93□□□□□ -0.82
PDLIM7-210ENST00000503827 IL15RAQ13261 267 aa9.93□□□□□ -0.82
PDLIM7-210ENST00000503827 KRTAP26-1Q6PEX3 210 aa9.93□□□□□ -0.82
PDLIM7-210ENST00000503827 IL36BQ9NZH7 164 aa9.93□□□□□ -0.82
PDLIM7-210ENST00000503827 PSG8Q9UQ74 426 aa9.93□□□□□ -0.82
PDLIM7-210ENST00000503827 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
PDLIM7-210ENST00000503827 EIF3GO75821 320 aaKnown RBP eCLIP9.92□□□□□ -0.82
PDLIM7-210ENST00000503827 PQLC2Q6ZP29 291 aa9.92□□□□□ -0.82
PDLIM7-210ENST00000503827 CHCHD5Q9BSY4 110 aa9.92□□□□□ -0.82
PDLIM7-210ENST00000503827 PRR34Q9NV39 138 aa9.92□□□□□ -0.82
PDLIM7-210ENST00000503827 IGKV3D-20A0A0C4DH25 116 aa9.91□□□□□ -0.82
PDLIM7-210ENST00000503827 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
PDLIM7-210ENST00000503827 PTTG1O95997 202 aa9.9□□□□□ -0.82
PDLIM7-210ENST00000503827 TCRAP04437 139 aa9.9□□□□□ -0.82
PDLIM7-210ENST00000503827 PRNTQ86SH4 94 aa9.9□□□□□ -0.82
PDLIM7-210ENST00000503827 OR11H4Q8NGC9 324 aa9.9□□□□□ -0.82
PDLIM7-210ENST00000503827 SEC22CQ9BRL7 303 aa9.9□□□□□ -0.82
PDLIM7-210ENST00000503827 H3BVH4 76 aa9.89□□□□□ -0.83
PDLIM7-210ENST00000503827 TCRBP04435 133 aa9.89□□□□□ -0.83
PDLIM7-210ENST00000503827 FLI1Q01543 452 aaPredicted RBP9.89□□□□□ -0.83
PDLIM7-210ENST00000503827 SAPCD1Q5SSQ6 148 aa9.89□□□□□ -0.83
PDLIM7-210ENST00000503827 LINC00269Q8N2A0 174 aa9.89□□□□□ -0.83
PDLIM7-210ENST00000503827 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.89□□□□□ -0.83
PDLIM7-210ENST00000503827 C5orf17Q8NAS9 161 aa9.89□□□□□ -0.83
PDLIM7-210ENST00000503827 SFRP2Q96HF1 295 aa9.89□□□□□ -0.83
PDLIM7-210ENST00000503827 A0A1W2PPV4 95 aa9.88□□□□□ -0.83
PDLIM7-210ENST00000503827 OR10G8Q8NGN5 311 aa9.88□□□□□ -0.83
PDLIM7-210ENST00000503827 FABP5P3A8MUU1 101 aa9.87□□□□□ -0.83
PDLIM7-210ENST00000503827 SLPIP03973 132 aa9.87□□□□□ -0.83
PDLIM7-210ENST00000503827 ARMS2P0C7Q2 107 aa9.87□□□□□ -0.83
PDLIM7-210ENST00000503827 MAJINQ3KP22 176 aa9.87□□□□□ -0.83
PDLIM7-210ENST00000503827 IGLV10-54A0A075B6I4 117 aa9.86□□□□□ -0.83
PDLIM7-210ENST00000503827 TRAV6A0A075B6T7 132 aa9.86□□□□□ -0.83
PDLIM7-210ENST00000503827 B4DEV8 164 aa9.86□□□□□ -0.83
PDLIM7-210ENST00000503827 RBX1P62877 108 aa9.86□□□□□ -0.83
PDLIM7-210ENST00000503827 LYPD6BQ8NI32 183 aa9.86□□□□□ -0.83
PDLIM7-210ENST00000503827 SCGB1C1Q8TD33 95 aa9.86□□□□□ -0.83
PDLIM7-210ENST00000503827 PHLDA3Q9Y5J5 127 aa9.86□□□□□ -0.83
PDLIM7-210ENST00000503827 COX6A2Q02221 97 aa9.85□□□□□ -0.83
PDLIM7-210ENST00000503827 TMEM97Q5BJF2 176 aa9.85□□□□□ -0.83
PDLIM7-210ENST00000503827 DNLZQ5SXM8 178 aa9.85□□□□□ -0.83
PDLIM7-210ENST00000503827 STPG4Q8N801 248 aa9.85□□□□□ -0.83
PDLIM7-210ENST00000503827 IGKV2-24A0A0C4DH68 120 aa9.84□□□□□ -0.83
PDLIM7-210ENST00000503827 M0R381 172 aa9.84□□□□□ -0.83
PDLIM7-210ENST00000503827 HMGB3O15347 200 aaKnown RBP9.84□□□□□ -0.83
PDLIM7-210ENST00000503827 REG3AQ06141 175 aa9.84□□□□□ -0.83
PDLIM7-210ENST00000503827 SRSF9Q13242 221 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDLIM7-210ENST00000503827 TRAV8-4A0A0B4J246 113 aa9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 NDUFS6O75380 124 aaKnown RBP9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 P01737 135 aa9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 TPT1P13693 172 aaKnown RBP9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 GAGE6Q13070 117 aa9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 NUDT15Q9NV35 164 aa9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 VAX2Q9UIW0 290 aa9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 EPDR1Q9UM22 224 aa9.83□□□□□ -0.84
PDLIM7-210ENST00000503827 MUC21A0A0G2JKD1 596 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 GRIFINA4D1Z8 144 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 H7C1H1 209 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 ARL14EPLP0DKL9 152 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 GZMBP10144 247 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 IL7P13232 177 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 RAB4BP61018 213 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 SUMO1P63165 101 aaKnown RBP9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 LRRC37A5PQ49AS3 106 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 ZFP82Q8N141 532 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 SDHCQ99643 169 aaPredicted RBP9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 RBM38Q9H0Z9 239 aaKnown RBP9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 MUC2Q02817 5179 aa9.82□□□□□ -0.84
PDLIM7-210ENST00000503827 FAM231BA6NCW3 169 aa9.81□□□□□ -0.84
PDLIM7-210ENST00000503827 KRBOX1C9JBD0 128 aa9.81□□□□□ -0.84
PDLIM7-210ENST00000503827 M0R036 132 aa9.81□□□□□ -0.84
PDLIM7-210ENST00000503827 ZNF56Q15929 161 aa9.81□□□□□ -0.84
PDLIM7-210ENST00000503827 NTM-AS1Q6ZSK4 140 aa9.81□□□□□ -0.84
PDLIM7-210ENST00000503827 PRSS3P2Q8NHM4 247 aa9.81□□□□□ -0.84
PDLIM7-210ENST00000503827 TRBV25-1A0A075B6N4 114 aa9.8□□□□□ -0.84
PDLIM7-210ENST00000503827 LYRM1O43325 122 aa9.8□□□□□ -0.84
PDLIM7-210ENST00000503827 IFNA7P01567 189 aa9.8□□□□□ -0.84
PDLIM7-210ENST00000503827 RPS10P46783 165 aaKnown RBP9.8□□□□□ -0.84
PDLIM7-210ENST00000503827 RAB2AP61019 212 aa9.8□□□□□ -0.84
PDLIM7-210ENST00000503827 Q6ZRP5 223 aa9.8□□□□□ -0.84
PDLIM7-210ENST00000503827 ARL2-SNX15V9GYD0 113 aa9.8□□□□□ -0.84
PDLIM7-210ENST00000503827 H0YIZ8 118 aa9.79□□□□□ -0.84
PDLIM7-210ENST00000503827 PLA2G10O15496 165 aa9.79□□□□□ -0.84
PDLIM7-210ENST00000503827 RAB5CP51148 216 aa9.79□□□□□ -0.84
PDLIM7-210ENST00000503827 PRR27Q6MZM9 219 aa9.79□□□□□ -0.84
PDLIM7-210ENST00000503827 DERL1Q9BUN8 251 aa9.79□□□□□ -0.84
PDLIM7-210ENST00000503827 TRAV34A0A0B4J273 112 aa9.78□□□□□ -0.84
PDLIM7-210ENST00000503827 H2AFB2P0C5Z0 115 aa9.78□□□□□ -0.84
PDLIM7-210ENST00000503827 CFAP161Q6P656 301 aa9.78□□□□□ -0.84
PDLIM7-210ENST00000503827 SUN5Q8TC36 379 aa9.78□□□□□ -0.84
PDLIM7-210ENST00000503827 SMIM3Q9BZL3 60 aa9.78□□□□□ -0.84
PDLIM7-210ENST00000503827 HSPB11Q9Y547 144 aa9.78□□□□□ -0.84
PDLIM7-210ENST00000503827 FAT4Q6V0I7 4981 aa9.77□□□□□ -0.85
PDLIM7-210ENST00000503827 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
PDLIM7-210ENST00000503827 CCDC160A6NGH7 325 aa9.77□□□□□ -0.85
PDLIM7-210ENST00000503827 SIX6O95475 246 aa9.77□□□□□ -0.85
PDLIM7-210ENST00000503827 STAG3L2P0CL84 134 aa9.77□□□□□ -0.85
PDLIM7-210ENST00000503827 STAG3L3P0CL85 134 aa9.77□□□□□ -0.85
PDLIM7-210ENST00000503827 GCHFRP30047 84 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms