RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SERTM2A0A1B0GWG4 89 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 RBFOX3A6NFN3 312 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 PGPEP1LA6NFU8 196 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 CFAP126Q5VTH2 177 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 SLC25A29Q8N8R3 303 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 ISOC2Q96AB3 205 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 C14orf144Q96I85 54 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 C9orf85Q96MD7 179 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 TXNDC17Q9BRA2 123 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
SCLT1-204ENST00000503215 RS1O15537 224 aa10.98□□□□□ -0.65
SCLT1-204ENST00000503215 PFN1P07737 140 aaKnown RBP10.98□□□□□ -0.65
SCLT1-204ENST00000503215 RNASE3P12724 160 aaKnown RBP10.98□□□□□ -0.65
SCLT1-204ENST00000503215 DDTP30046 118 aa10.98□□□□□ -0.65
SCLT1-204ENST00000503215 FGF8P55075 233 aaPredicted RBP10.98□□□□□ -0.65
SCLT1-204ENST00000503215 UBE2G2P60604 165 aa10.98□□□□□ -0.65
SCLT1-204ENST00000503215 ZNF506Q5JVG8 444 aa10.98□□□□□ -0.65
SCLT1-204ENST00000503215 MRPL52Q86TS9 123 aaKnown RBP10.98□□□□□ -0.65
SCLT1-204ENST00000503215 CYB561D1Q8N8Q1 229 aa10.98□□□□□ -0.65
SCLT1-204ENST00000503215 NHLRC2Q8NBF2 726 aa10.98□□□□□ -0.65
SCLT1-204ENST00000503215 CTDSP1Q9GZU7 261 aa10.98□□□□□ -0.65
SCLT1-204ENST00000503215 MSRB1Q9NZV6 116 aa10.98□□□□□ -0.65
SCLT1-204ENST00000503215 A0A087WTM6 91 aa10.97□□□□□ -0.65
SCLT1-204ENST00000503215 IGKV3D-20A0A0C4DH25 116 aa10.97□□□□□ -0.65
SCLT1-204ENST00000503215 FBLL1A6NHQ2 334 aaKnown RBP10.97□□□□□ -0.65
SCLT1-204ENST00000503215 K7EQM0 130 aa10.97□□□□□ -0.65
SCLT1-204ENST00000503215 NDUFA6P56556 154 aa10.97□□□□□ -0.65
SCLT1-204ENST00000503215 ELOBQ15370 118 aa10.97□□□□□ -0.65
SCLT1-204ENST00000503215 Q6ZSN1 163 aa10.97□□□□□ -0.65
SCLT1-204ENST00000503215 HIST3H2BBQ8N257 126 aa10.97□□□□□ -0.65
SCLT1-204ENST00000503215 SCRT2Q9NQ03 307 aa10.97□□□□□ -0.65
SCLT1-204ENST00000503215 TRAV9-2A0A087WT02 112 aa10.96□□□□□ -0.65
SCLT1-204ENST00000503215 A0A1W2PRE2 83 aa10.96□□□□□ -0.65
SCLT1-204ENST00000503215 CRYGDP07320 174 aa10.96□□□□□ -0.65
SCLT1-204ENST00000503215 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
SCLT1-204ENST00000503215 RAB4AP20338 218 aa10.96□□□□□ -0.65
SCLT1-204ENST00000503215 EVI2AP22794 236 aa10.96□□□□□ -0.65
SCLT1-204ENST00000503215 TAGLN2P37802 199 aaKnown RBP10.96□□□□□ -0.65
SCLT1-204ENST00000503215 Q8N1X5 172 aa10.96□□□□□ -0.65
SCLT1-204ENST00000503215 TRBV24-1A0A075B6N3 115 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 CTXND1A0A1B0GTU2 59 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 IFITM10A6NMD0 228 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BKO60814 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BJP06899 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BOP23527 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BBP33778 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 AKR1C3P42330 323 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BDP58876 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BCP62807 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST2H2BEQ16778 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 ZNF674Q2M3X9 581 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.95□□□□□ -0.66
SCLT1-204ENST00000503215 NFE4Q86UQ8 179 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BHQ93079 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BNQ99877 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 HIST1H2BMQ99879 126 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 ARL2-SNX15V9GYD0 113 aa10.95□□□□□ -0.66
SCLT1-204ENST00000503215 ERVFC1-1P60608 527 aa10.94□□□□□ -0.66
SCLT1-204ENST00000503215 JOSD1Q15040 202 aaPredicted RBP10.94□□□□□ -0.66
SCLT1-204ENST00000503215 SAPCD1Q5SSQ6 148 aa10.94□□□□□ -0.66
SCLT1-204ENST00000503215 OR10D4PQ8NGN7 298 aa10.94□□□□□ -0.66
SCLT1-204ENST00000503215 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
SCLT1-204ENST00000503215 Q9UF83 564 aa10.94□□□□□ -0.66
SCLT1-204ENST00000503215 CRIP1P50238 77 aa10.93□□□□□ -0.66
SCLT1-204ENST00000503215 TIRAPP58753 221 aa10.93□□□□□ -0.66
SCLT1-204ENST00000503215 KRTAP10-1P60331 282 aa10.93□□□□□ -0.66
SCLT1-204ENST00000503215 BTF3L4Q96K17 158 aa10.93□□□□□ -0.66
SCLT1-204ENST00000503215 JPT2Q9H910 190 aa10.93□□□□□ -0.66
SCLT1-204ENST00000503215 IGHV3-38A0A0C4DH36 116 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 TRBV6-4A0A1B0GX49 114 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 PEX7O00628 323 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 AKR1C8PQ5T2L2 129 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 SH2D6Q7Z4S9 175 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 Q86TA4 180 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 FAM213BQ8TBF2 198 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 PTH2Q96A98 100 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 PRADC1Q9BSG0 188 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 SAMD10Q9BYL1 202 aa10.92□□□□□ -0.66
SCLT1-204ENST00000503215 EREGO14944 169 aa10.91□□□□□ -0.66
SCLT1-204ENST00000503215 FHITP49789 147 aa10.91□□□□□ -0.66
SCLT1-204ENST00000503215 XGP55808 180 aa10.91□□□□□ -0.66
SCLT1-204ENST00000503215 RHOHQ15669 191 aa10.91□□□□□ -0.66
SCLT1-204ENST00000503215 Q8N3U1 123 aa10.91□□□□□ -0.66
SCLT1-204ENST00000503215 FABP5P3A8MUU1 101 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 K7EP13 123 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 IGHV3-30P01768 117 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 IGHV3-33P01772 117 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 IGHV3-30-3P0DP02 117 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 LINC01556Q5JQF7 62 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 ZC2HC1AQ96GY0 325 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 PARLQ9H300 379 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 VAX2Q9UIW0 290 aa10.9□□□□□ -0.66
SCLT1-204ENST00000503215 MAP1LC3B2A6NCE7 125 aa10.9□□□□□ -0.67
SCLT1-204ENST00000503215 OR10J3Q5JRS4 329 aa10.9□□□□□ -0.67
SCLT1-204ENST00000503215 MAP1LC3BQ9GZQ8 125 aa10.9□□□□□ -0.67
SCLT1-204ENST00000503215 GRIFINA4D1Z8 144 aa10.89□□□□□ -0.67
SCLT1-204ENST00000503215 LRCOL1A6NCL2 159 aa10.89□□□□□ -0.67
SCLT1-204ENST00000503215 IBA57-AS1B1ANH7 110 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms