RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
TNPO1-202ENST00000503084 RETNLBQ9BQ08 111 aa6.73□□□□□ -1.33
TNPO1-202ENST00000503084 UQCC1Q9NVA1 299 aa6.73□□□□□ -1.33
TNPO1-202ENST00000503084 MBPP02686 304 aaPredicted RBP6.72□□□□□ -1.33
TNPO1-202ENST00000503084 MZT2AQ6P582 158 aa6.72□□□□□ -1.33
TNPO1-202ENST00000503084 NTM-AS1Q6ZSK4 140 aa6.72□□□□□ -1.33
TNPO1-202ENST00000503084 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
TNPO1-202ENST00000503084 OR10G8Q8NGN5 311 aa6.72□□□□□ -1.33
TNPO1-202ENST00000503084 NMES1Q9C002 83 aa6.72□□□□□ -1.33
TNPO1-202ENST00000503084 A0A1W2PNN7 141 aa6.71□□□□□ -1.34
TNPO1-202ENST00000503084 C7orf66A4D0T2 115 aa6.71□□□□□ -1.34
TNPO1-202ENST00000503084 OR7C2O60412 319 aa6.71□□□□□ -1.34
TNPO1-202ENST00000503084 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.34
TNPO1-202ENST00000503084 H2AFB2P0C5Z0 115 aa6.71□□□□□ -1.34
TNPO1-202ENST00000503084 AMTP48728 403 aa6.71□□□□□ -1.34
TNPO1-202ENST00000503084 UBE2L3P68036 154 aaKnown RBP6.71□□□□□ -1.34
TNPO1-202ENST00000503084 CFAP161Q6P656 301 aa6.71□□□□□ -1.34
TNPO1-202ENST00000503084 GVQW2A0A096LPI5 108 aaPredicted RBP6.7□□□□□ -1.34
TNPO1-202ENST00000503084 CST7O76096 145 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 GCGP01275 180 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 FGF7P21781 194 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 S100A4P26447 101 aaKnown RBP6.7□□□□□ -1.34
TNPO1-202ENST00000503084 RAB2AP61019 212 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 PRR27Q6MZM9 219 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 NEXN-AS1Q8NBZ9 246 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 SGK494Q96LW2 274 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 MIXL1Q9H2W2 232 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 PKIGQ9Y2B9 76 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 USH2AO75445 5202 aa6.7□□□□□ -1.34
TNPO1-202ENST00000503084 GAGE12HA6NDE8 117 aa6.69□□□□□ -1.34
TNPO1-202ENST00000503084 H3BVH4 76 aa6.69□□□□□ -1.34
TNPO1-202ENST00000503084 PTTG1IPP53801 180 aa6.69□□□□□ -1.34
TNPO1-202ENST00000503084 VBP1P61758 197 aa6.69□□□□□ -1.34
TNPO1-202ENST00000503084 GNG5P63218 68 aa6.69□□□□□ -1.34
TNPO1-202ENST00000503084 CMTM2Q8TAZ6 248 aa6.69□□□□□ -1.34
TNPO1-202ENST00000503084 OR5AC2Q9NZP5 309 aa6.69□□□□□ -1.34
TNPO1-202ENST00000503084 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
TNPO1-202ENST00000503084 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
TNPO1-202ENST00000503084 CFC1BP0CG36 223 aa6.68□□□□□ -1.34
TNPO1-202ENST00000503084 SPANXN2Q5MJ10 180 aa6.68□□□□□ -1.34
TNPO1-202ENST00000503084 PHF5AQ7RTV0 110 aaKnown RBP6.68□□□□□ -1.34
TNPO1-202ENST00000503084 MITD1Q8WV92 249 aa6.68□□□□□ -1.34
TNPO1-202ENST00000503084 NDFIP1Q9BT67 221 aa6.68□□□□□ -1.34
TNPO1-202ENST00000503084 MLST8Q9BVC4 326 aa6.68□□□□□ -1.34
TNPO1-202ENST00000503084 OTORQ9NRC9 128 aa6.68□□□□□ -1.34
TNPO1-202ENST00000503084 LYRM2Q9NU23 88 aaPredicted RBP6.68□□□□□ -1.34
TNPO1-202ENST00000503084 PHLDA3Q9Y5J5 127 aa6.68□□□□□ -1.34
TNPO1-202ENST00000503084 IGKV3D-20A0A0C4DH25 116 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 MT1HP80294 61 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 OR11H4Q8NGC9 324 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 MCFD2Q8NI22 146 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 AP3S1Q92572 193 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 LINC00526Q96FQ7 95 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 SFRP2Q96HF1 295 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 CARD19Q96LW7 228 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 NPCDR1Q9BY65 106 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 IL36BQ9NZH7 164 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 RAB26Q9ULW5 256 aa6.67□□□□□ -1.34
TNPO1-202ENST00000503084 TRBV25-1A0A075B6N4 114 aa6.66□□□□□ -1.34
TNPO1-202ENST00000503084 EIF5AP63241 154 aaKnown RBP6.66□□□□□ -1.34
TNPO1-202ENST00000503084 GAGE2BQ13066 116 aa6.66□□□□□ -1.34
TNPO1-202ENST00000503084 IAH1Q2TAA2 248 aaPredicted RBP6.66□□□□□ -1.34
TNPO1-202ENST00000503084 IGLV7-46A0A075B6I9 117 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 BCAP31P51572 246 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
TNPO1-202ENST00000503084 CTF1Q16619 201 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 IQCJQ1A5X6 159 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 C9orf116Q5BN46 136 aaPredicted RBP6.65□□□□□ -1.34
TNPO1-202ENST00000503084 FAM162BQ5T6X4 162 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 KRTAP11-1Q8IUC1 163 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.65□□□□□ -1.34
TNPO1-202ENST00000503084 DERL1Q9BUN8 251 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 VCX3BQ9H321 246 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 GSKIPQ9P0R6 139 aa6.65□□□□□ -1.34
TNPO1-202ENST00000503084 CARHSP1Q9Y2V2 147 aaKnown RBP6.65□□□□□ -1.34
TNPO1-202ENST00000503084 SYNE2Q8WXH0 6885 aaKnown RBP6.65□□□□□ -1.35
TNPO1-202ENST00000503084 TRBV6-1A0A0K0K1D8 114 aa6.64□□□□□ -1.35
TNPO1-202ENST00000503084 L7N2F9 121 aa6.64□□□□□ -1.35
TNPO1-202ENST00000503084 SULT1A2P50226 295 aa6.64□□□□□ -1.35
TNPO1-202ENST00000503084 VAMP2P63027 116 aa6.64□□□□□ -1.35
TNPO1-202ENST00000503084 IL18Q14116 193 aa6.64□□□□□ -1.35
TNPO1-202ENST00000503084 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
TNPO1-202ENST00000503084 TMEM97Q5BJF2 176 aa6.64□□□□□ -1.35
TNPO1-202ENST00000503084 RPP21Q9H633 154 aaKnown RBP6.64□□□□□ -1.35
TNPO1-202ENST00000503084 IGHV1-24A0A0C4DH33 117 aa6.63□□□□□ -1.35
TNPO1-202ENST00000503084 C9orf170A2RU37 121 aa6.63□□□□□ -1.35
TNPO1-202ENST00000503084 M0R381 172 aa6.63□□□□□ -1.35
TNPO1-202ENST00000503084 RGS5O15539 181 aa6.63□□□□□ -1.35
TNPO1-202ENST00000503084 EIF3GO75821 320 aaKnown RBP eCLIP6.63□□□□□ -1.35
TNPO1-202ENST00000503084 ARMS2P0C7Q2 107 aa6.63□□□□□ -1.35
TNPO1-202ENST00000503084 ZNF674Q2M3X9 581 aa6.63□□□□□ -1.35
TNPO1-202ENST00000503084 SMUG1Q53HV7 270 aa6.63□□□□□ -1.35
TNPO1-202ENST00000503084 AQP10Q96PS8 301 aa6.63□□□□□ -1.35
TNPO1-202ENST00000503084 A0A087WZ39 114 aa6.62□□□□□ -1.35
TNPO1-202ENST00000503084 ZNF56Q15929 161 aa6.62□□□□□ -1.35
TNPO1-202ENST00000503084 ZFP69Q49AA0 526 aa6.62□□□□□ -1.35
TNPO1-202ENST00000503084 FAM74A1Q5RGS3 127 aa6.62□□□□□ -1.35
TNPO1-202ENST00000503084 THAP6Q8TBB0 222 aa6.62□□□□□ -1.35
TNPO1-202ENST00000503084 C11orf1Q9H5F2 150 aa6.62□□□□□ -1.35
TNPO1-202ENST00000503084 TRAV6A0A075B6T7 132 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms