RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 PSMB8P28062 276 aa17.2■□□□□ 0.34
SNF8-202ENST00000502492 POLR2KP53803 58 aaKnown RBP17.2■□□□□ 0.34
SNF8-202ENST00000502492 DEFB113Q30KQ7 82 aa17.2■□□□□ 0.34
SNF8-202ENST00000502492 A0A1B0GWB2 263 aa17.19■□□□□ 0.34
SNF8-202ENST00000502492 DUSP14O95147 198 aaKnown RBP17.19■□□□□ 0.34
SNF8-202ENST00000502492 JPT2Q9H910 190 aa17.19■□□□□ 0.34
SNF8-202ENST00000502492 CYSLTR1Q9Y271 337 aa17.19■□□□□ 0.34
SNF8-202ENST00000502492 LINC01549A6NIU2 74 aa17.19■□□□□ 0.34
SNF8-202ENST00000502492 CRYGDP07320 174 aa17.19■□□□□ 0.34
SNF8-202ENST00000502492 LGALS1P09382 135 aaKnown RBP17.19■□□□□ 0.34
SNF8-202ENST00000502492 COTL1Q14019 142 aa17.19■□□□□ 0.34
SNF8-202ENST00000502492 PRADC1Q9BSG0 188 aa17.19■□□□□ 0.34
SNF8-202ENST00000502492 B4DSR2 109 aa17.18■□□□□ 0.34
SNF8-202ENST00000502492 TMEM95Q3KNT9 176 aa17.18■□□□□ 0.34
SNF8-202ENST00000502492 SUMO4Q6EEV6 95 aa17.18■□□□□ 0.34
SNF8-202ENST00000502492 FOXI2Q6ZQN5 318 aa17.18■□□□□ 0.34
SNF8-202ENST00000502492 ZNF479Q96JC4 524 aa17.18■□□□□ 0.34
SNF8-202ENST00000502492 TSHBP01222 138 aa17.18■□□□□ 0.34
SNF8-202ENST00000502492 DSCR9P59020 149 aa17.18■□□□□ 0.34
SNF8-202ENST00000502492 IGIPA6NJ69 53 aa17.17■□□□□ 0.34
SNF8-202ENST00000502492 ZFP2Q6ZN57 461 aa17.17■□□□□ 0.34
SNF8-202ENST00000502492 ODF3Q96PU9 254 aa17.17■□□□□ 0.34
SNF8-202ENST00000502492 TRAV12-3A0A0B4J271 114 aa17.16■□□□□ 0.34
SNF8-202ENST00000502492 CD7P09564 240 aa17.16■□□□□ 0.34
SNF8-202ENST00000502492 LRRC75A-AS1Q8N1F1 130 aa17.16■□□□□ 0.34
SNF8-202ENST00000502492 NAV2Q8IVL1 2488 aa17.16■□□□□ 0.34
SNF8-202ENST00000502492 WFDC12Q8WWY7 111 aa17.16■□□□□ 0.34
SNF8-202ENST00000502492 VCYO14598 125 aa17.15■□□□□ 0.34
SNF8-202ENST00000502492 UNC79Q9P2D8 2635 aa17.15■□□□□ 0.34
SNF8-202ENST00000502492 TP53TG1Q9Y2A0 90 aa17.15■□□□□ 0.34
SNF8-202ENST00000502492 HECTD1Q9ULT8 2610 aa17.15■□□□□ 0.34
SNF8-202ENST00000502492 ANKRD17O75179 2603 aaKnown RBP17.15■□□□□ 0.34
SNF8-202ENST00000502492 IGLV4-69A0A075B6H9 119 aa17.14■□□□□ 0.33
SNF8-202ENST00000502492 A0A087WWL8 130 aa17.14■□□□□ 0.33
SNF8-202ENST00000502492 C9orf85Q96MD7 179 aa17.14■□□□□ 0.33
SNF8-202ENST00000502492 LGALS9O00182 355 aa17.14■□□□□ 0.33
SNF8-202ENST00000502492 GATA3P23771 443 aa17.14■□□□□ 0.33
SNF8-202ENST00000502492 RRN3P1Q2M238 152 aa17.14■□□□□ 0.33
SNF8-202ENST00000502492 KIR2DL4Q99706 377 aa17.13■□□□□ 0.33
SNF8-202ENST00000502492 IGHV3-16A0A0C4DH30 117 aa17.13■□□□□ 0.33
SNF8-202ENST00000502492 TRBV6-5A0A0K0K1A5 114 aa17.13■□□□□ 0.33
SNF8-202ENST00000502492 ZNF815PA8K554 130 aa17.13■□□□□ 0.33
SNF8-202ENST00000502492 PAPPA-AS1Q5QFB9 102 aa17.13■□□□□ 0.33
SNF8-202ENST00000502492 TMEM141Q96I45 108 aa17.13■□□□□ 0.33
SNF8-202ENST00000502492 A0A0J9YX75 114 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 TRBV27A0A0K0K1C4 114 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 TMEM89A2RUT3 159 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 IGHV4-59P01825 116 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 ZNF688P0C7X2 276 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 RIPPLY3P57055 190 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 SDHAF1A6NFY7 115 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 C11orf86A6NJI1 115 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 F5H697 171 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 F8W1H4 67 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 PMVKQ15126 192 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 C10orf99Q6UWK7 81 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 TIMM17AQ99595 171 aa17.12■□□□□ 0.33
SNF8-202ENST00000502492 DEFB112Q30KQ8 113 aa17.1■□□□□ 0.33
SNF8-202ENST00000502492 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.1■□□□□ 0.331e-9■■■■□ 20.9
SNF8-202ENST00000502492 RPL39P62891 51 aaKnown RBP17.1■□□□□ 0.33
SNF8-202ENST00000502492 SCGB2A2Q13296 93 aa17.1■□□□□ 0.33
SNF8-202ENST00000502492 MDFICQ9P1T7 246 aa17.1■□□□□ 0.33
SNF8-202ENST00000502492 TEX48A0A1B0GUV7 120 aa17.09■□□□□ 0.33
SNF8-202ENST00000502492 K7EQG2 157 aa17.09■□□□□ 0.33
SNF8-202ENST00000502492 SNRPD3P62318 126 aaKnown RBP17.09■□□□□ 0.33
SNF8-202ENST00000502492 RPL24P83731 157 aaKnown RBP17.09■□□□□ 0.33
SNF8-202ENST00000502492 CD300EQ496F6 205 aaPredicted RBP17.09■□□□□ 0.33
SNF8-202ENST00000502492 Q5PR19 223 aa17.09■□□□□ 0.33
SNF8-202ENST00000502492 PLEKHB2Q96CS7 222 aa17.09■□□□□ 0.33
SNF8-202ENST00000502492 HOXA3O43365 443 aaPredicted RBP17.08■□□□□ 0.33
SNF8-202ENST00000502492 MORN3Q6PF18 240 aaPredicted RBP17.08■□□□□ 0.33
SNF8-202ENST00000502492 TRAV12-2A0A075B6T6 113 aa17.08■□□□□ 0.32
SNF8-202ENST00000502492 SCGB1D4Q6XE38 83 aa17.08■□□□□ 0.32
SNF8-202ENST00000502492 DEFB104AQ8WTQ1 72 aa17.08■□□□□ 0.32
SNF8-202ENST00000502492 H3BMG7 143 aa17.07■□□□□ 0.32
SNF8-202ENST00000502492 Q8N1Y9 231 aa17.07■□□□□ 0.32
SNF8-202ENST00000502492 SYT8Q8NBV8 401 aa17.07■□□□□ 0.32
SNF8-202ENST00000502492 KLHL30-AS1Q8NEE0 82 aa17.07■□□□□ 0.32
SNF8-202ENST00000502492 M0QY20 66 aa17.07■□□□□ 0.32
SNF8-202ENST00000502492 HERVK_113P61574 105 aa17.07■□□□□ 0.32
SNF8-202ENST00000502492 WFDC2Q14508 124 aa17.07■□□□□ 0.32
SNF8-202ENST00000502492 KRTAP1-3Q8IUG1 177 aa17.07■□□□□ 0.32
SNF8-202ENST00000502492 FAM74A4Q5TZK3 123 aa17.06■□□□□ 0.32
SNF8-202ENST00000502492 ITPR2Q14571 2701 aa17.06■□□□□ 0.32
SNF8-202ENST00000502492 IGKV3-20P01619 116 aa17.05■□□□□ 0.32
SNF8-202ENST00000502492 EMP1P54849 157 aa17.05■□□□□ 0.32
SNF8-202ENST00000502492 SPANXB1Q9NS25 103 aaPredicted RBP17.05■□□□□ 0.32
SNF8-202ENST00000502492 IGHV1OR15-1A0A075B7D0 117 aa17.05■□□□□ 0.32
SNF8-202ENST00000502492 A0A096LNT2 108 aa17.05■□□□□ 0.32
SNF8-202ENST00000502492 TMEM238LA0A1B0GVL6 79 aa17.05■□□□□ 0.32
SNF8-202ENST00000502492 A6NJY4 79 aa17.05■□□□□ 0.32
SNF8-202ENST00000502492 ZNF876PQ49A33 203 aa17.05■□□□□ 0.32
SNF8-202ENST00000502492 CSPG4Q6UVK1 2322 aa17.05■□□□□ 0.32
SNF8-202ENST00000502492 MAP1AP78559 2803 aaPredicted RBP17.05■□□□□ 0.32
SNF8-202ENST00000502492 UBE2D1P51668 147 aa17.04■□□□□ 0.32
SNF8-202ENST00000502492 AMTNQ6UX39 209 aa17.04■□□□□ 0.32
SNF8-202ENST00000502492 PDZD2O15018 2839 aa17.04■□□□□ 0.32
SNF8-202ENST00000502492 LINC01356Q8N9X3 169 aa17.04■□□□□ 0.32
SNF8-202ENST00000502492 SRSF9Q13242 221 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNF8-202ENST00000502492 PRO0461Q9UI25 63 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms