RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 IGHV3-73A0A0B4J1V6 119 aa2.55□□□□□ -2
SUB1-202ENST00000502453 UBE2L5PA0A1B0GUS4 154 aa2.55□□□□□ -2
SUB1-202ENST00000502453 CYSRT1A8MQ03 144 aa2.55□□□□□ -2
SUB1-202ENST00000502453 ZNF736B4DX44 427 aaPredicted RBP2.55□□□□□ -2
SUB1-202ENST00000502453 PRB4P10163 310 aaPredicted RBP2.55□□□□□ -2
SUB1-202ENST00000502453 NANOS3P60323 173 aaKnown RBP2.55□□□□□ -2
SUB1-202ENST00000502453 UBE2L3P68036 154 aaKnown RBP2.55□□□□□ -2
SUB1-202ENST00000502453 FAM216BQ8N7L0 139 aa2.55□□□□□ -2
SUB1-202ENST00000502453 CCL4L1Q8NHW4 92 aa2.55□□□□□ -2
SUB1-202ENST00000502453 RETNLBQ9BQ08 111 aa2.55□□□□□ -2
SUB1-202ENST00000502453 LRP4O75096 1905 aa2.55□□□□□ -2
SUB1-202ENST00000502453 CFAP47Q6ZTR5 3102 aa2.54□□□□□ -2
SUB1-202ENST00000502453 SMG1Q96Q15 3661 aaKnown RBP2.54□□□□□ -2
SUB1-202ENST00000502453 IGLV3-12A0A075B6K2 115 aa2.54□□□□□ -2
SUB1-202ENST00000502453 TRAV3A0A0B4J244 114 aa2.54□□□□□ -2
SUB1-202ENST00000502453 CCL16O15467 120 aa2.54□□□□□ -2
SUB1-202ENST00000502453 IGHV1-46P01743 117 aa2.54□□□□□ -2
SUB1-202ENST00000502453 CCKP06307 115 aa2.54□□□□□ -2
SUB1-202ENST00000502453 S100A7L2Q5SY68 101 aa2.54□□□□□ -2
SUB1-202ENST00000502453 C5orf38Q86SI9 138 aa2.54□□□□□ -2
SUB1-202ENST00000502453 ZNF355PQ9NSJ1 428 aa2.54□□□□□ -2
SUB1-202ENST00000502453 LAMA1P25391 3075 aa2.54□□□□□ -2
SUB1-202ENST00000502453 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.54□□□□□ -2
SUB1-202ENST00000502453 DSCR4P56555 118 aaPredicted RBP2.54□□□□□ -2
SUB1-202ENST00000502453 TIMM9Q9Y5J7 89 aa2.54□□□□□ -2
SUB1-202ENST00000502453 IGKV1D-17A0A075B6S4 117 aa2.54□□□□□ -2
SUB1-202ENST00000502453 FXYD6-FXYD2A0A087WZ82 144 aa2.54□□□□□ -2
SUB1-202ENST00000502453 ATOX1O00244 68 aa2.54□□□□□ -2
SUB1-202ENST00000502453 IGKV2-30P06310 120 aa2.54□□□□□ -2
SUB1-202ENST00000502453 CCL8P80075 99 aa2.54□□□□□ -2
SUB1-202ENST00000502453 FXYD6Q9H0Q3 95 aa2.54□□□□□ -2
SUB1-202ENST00000502453 XAGE1AQ9HD64 81 aa2.54□□□□□ -2
SUB1-202ENST00000502453 PLXNB2O15031 1838 aa2.54□□□□□ -2
SUB1-202ENST00000502453 ZNF236Q9UL36 1845 aa2.54□□□□□ -2
SUB1-202ENST00000502453 MIAQ16674 131 aa2.54□□□□□ -2
SUB1-202ENST00000502453 CPAMD8Q8IZJ3 1885 aa2.54□□□□□ -2
SUB1-202ENST00000502453 TOMM5Q8N4H5 51 aa2.54□□□□□ -2
SUB1-202ENST00000502453 TSKUQ8WUA8 353 aa2.54□□□□□ -2
SUB1-202ENST00000502453 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
SUB1-202ENST00000502453 RPP21Q9H633 154 aaKnown RBP2.54□□□□□ -2
SUB1-202ENST00000502453 PLXNA1Q9UIW2 1896 aa2.54□□□□□ -2
SUB1-202ENST00000502453 MYO9BQ13459 2157 aa2.53□□□□□ -2
SUB1-202ENST00000502453 NPYP01303 97 aa2.53□□□□□ -2
SUB1-202ENST00000502453 C3orf79P0CE67 100 aa2.53□□□□□ -2
SUB1-202ENST00000502453 ZNF816Q0VGE8 651 aaPredicted RBP2.53□□□□□ -2
SUB1-202ENST00000502453 Q6P435 159 aa2.53□□□□□ -2
SUB1-202ENST00000502453 CYB561D1Q8N8Q1 229 aa2.53□□□□□ -2
SUB1-202ENST00000502453 MANBALQ9NQG1 85 aa2.53□□□□□ -2
SUB1-202ENST00000502453 TMEM14AQ9Y6G1 99 aa2.53□□□□□ -2
SUB1-202ENST00000502453 IGHV3-64DA0A0J9YX35 117 aa2.53□□□□□ -2
SUB1-202ENST00000502453 C17orf51A8MQB3 221 aa2.53□□□□□ -2
SUB1-202ENST00000502453 TVP23CQ96ET8 276 aa2.53□□□□□ -2
SUB1-202ENST00000502453 TRAPPC1Q9Y5R8 145 aa2.53□□□□□ -2
SUB1-202ENST00000502453 LY96Q9Y6Y9 160 aa2.53□□□□□ -2
SUB1-202ENST00000502453 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.53□□□□□ -2.01
SUB1-202ENST00000502453 IGHV3-30-3P0DP02 117 aa2.53□□□□□ -2.01
SUB1-202ENST00000502453 PSMG4Q5JS54 123 aa2.53□□□□□ -2.01
SUB1-202ENST00000502453 SDIM1Q6ZPB5 146 aa2.53□□□□□ -2.01
SUB1-202ENST00000502453 SERP2Q8N6R1 65 aa2.53□□□□□ -2.01
SUB1-202ENST00000502453 C15orf56Q8N910 161 aa2.53□□□□□ -2.01
SUB1-202ENST00000502453 KRTAP9-2Q9BYQ4 174 aa2.53□□□□□ -2.01
SUB1-202ENST00000502453 CST11Q9H112 138 aa2.53□□□□□ -2.01
SUB1-202ENST00000502453 KIAA1549Q9HCM3 1950 aa2.53□□□□□ -2.01
SUB1-202ENST00000502453 PLXNA2O75051 1894 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 HCRTO43612 131 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 CCL5P13501 91 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 LOC285556D6RIA3 1793 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 C1orf64Q8NEQ6 169 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 GTF3C1Q12789 2109 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 SMIM13P0DJ93 91 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 COX8AP10176 69 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 MDKP21741 143 aaPredicted RBP2.52□□□□□ -2.01
SUB1-202ENST00000502453 SSBP1Q04837 148 aaKnown RBP2.52□□□□□ -2.01
SUB1-202ENST00000502453 TAS2R4Q9NYW5 299 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 GBF1Q92538 1859 aa2.52□□□□□ -2.01
SUB1-202ENST00000502453 TRAV2A0A0B4J234 112 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 LOC285095A0A1B0GVY8 99 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 KRTDAPP60985 99 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 PRO3102Q9H379 93 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 ABRACLQ9P1F3 81 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 PIPP12273 146 aaPredicted RBP2.51□□□□□ -2.01
SUB1-202ENST00000502453 Q1T7F1 81 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 TMEM136Q6ZRR5 245 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 SMCR5Q8TEV8 140 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 NABP2Q9BQ15 211 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 WDR87Q6ZQQ6 2873 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 MGAMO43451 1857 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 COL2A1P02458 1487 aaPredicted RBP2.51□□□□□ -2.01
SUB1-202ENST00000502453 TRBV6-7A0A0A0MS04 114 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 MGST1P10620 155 aaKnown RBP2.51□□□□□ -2.01
SUB1-202ENST00000502453 SLC50A1Q9BRV3 221 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 KRTAP9-4Q9BYQ2 154 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 CRIP2P52943 208 aaPredicted RBP2.51□□□□□ -2.01
SUB1-202ENST00000502453 Q6ZTC4 211 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 PFN4Q8NHR9 129 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 SPTSSAQ969W0 71 aa2.51□□□□□ -2.01
SUB1-202ENST00000502453 TRGV9Q99603 122 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms