RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 ZNF479Q96JC4 524 aa13.81□□□□□ -0.2
LINC01550-201ENST00000499006 AP1S3Q96PC3 154 aa13.81□□□□□ -0.2
LINC01550-201ENST00000499006 KIF25-AS1Q9Y6Z4 181 aa13.81□□□□□ -0.2
LINC01550-201ENST00000499006 DNAH7Q8WXX0 4024 aa13.81□□□□□ -0.2
LINC01550-201ENST00000499006 TRGC1P0CF51 173 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 EVI2AP22794 236 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 ELOBQ15370 118 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 TMEM88Q6PEY1 159 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 A0A087WWL8 130 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 A0A1B0GW15 77 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 ATP5G1P05496 136 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 ZFP2Q6ZN57 461 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 CBLN2Q8IUK8 224 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 C14orf178Q8N769 122 aaPredicted RBP13.8□□□□□ -0.2
LINC01550-201ENST00000499006 YPEL4Q96NS1 127 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 SMCO4Q9NRQ5 59 aa13.8□□□□□ -0.2
LINC01550-201ENST00000499006 CIDEAO60543 219 aa13.79□□□□□ -0.2
LINC01550-201ENST00000499006 IGHV3-53P01767 116 aa13.79□□□□□ -0.2
LINC01550-201ENST00000499006 LINC00315P59091 139 aa13.79□□□□□ -0.2
LINC01550-201ENST00000499006 HBBP68871 147 aa13.79□□□□□ -0.2
LINC01550-201ENST00000499006 GATD1Q8NB37 220 aa13.79□□□□□ -0.2
LINC01550-201ENST00000499006 FAM74A4Q5TZK3 123 aa13.78□□□□□ -0.2
LINC01550-201ENST00000499006 TMEM191AQ9H0A3 160 aa13.78□□□□□ -0.2
LINC01550-201ENST00000499006 RHODO00212 210 aa13.77□□□□□ -0.21
LINC01550-201ENST00000499006 SCO1O75880 301 aa13.77□□□□□ -0.21
LINC01550-201ENST00000499006 HOXA5P20719 270 aa13.77□□□□□ -0.21
LINC01550-201ENST00000499006 CAMPP49913 170 aa13.77□□□□□ -0.21
LINC01550-201ENST00000499006 FHL2Q14192 279 aa13.77□□□□□ -0.21
LINC01550-201ENST00000499006 RASL11AQ6T310 242 aa13.77□□□□□ -0.21
LINC01550-201ENST00000499006 DPH3P1Q9H4G8 78 aa13.77□□□□□ -0.21
LINC01550-201ENST00000499006 TRBV24-1A0A075B6N3 115 aa13.76□□□□□ -0.21
LINC01550-201ENST00000499006 SMIM17P0DL12 118 aa13.76□□□□□ -0.21
LINC01550-201ENST00000499006 TGIF2-C20orf24A0A0A6YYL0 155 aa13.75□□□□□ -0.21
LINC01550-201ENST00000499006 IGHV3-73A0A0B4J1V6 119 aa13.75□□□□□ -0.21
LINC01550-201ENST00000499006 S100A8P05109 93 aa13.75□□□□□ -0.21
LINC01550-201ENST00000499006 SMIM15Q7Z3B0 74 aa13.75□□□□□ -0.21
LINC01550-201ENST00000499006 DEFB131BA0A096LNP1 70 aa13.74□□□□□ -0.21
LINC01550-201ENST00000499006 TRAV10A0A0B4J240 114 aa13.74□□□□□ -0.21
LINC01550-201ENST00000499006 TRGV4A0A0C4DH28 118 aa13.74□□□□□ -0.21
LINC01550-201ENST00000499006 HTN3P15516 51 aa13.74□□□□□ -0.21
LINC01550-201ENST00000499006 GATA1P15976 413 aaPredicted RBP13.74□□□□□ -0.21
LINC01550-201ENST00000499006 Q6ZSN1 163 aa13.74□□□□□ -0.21
LINC01550-201ENST00000499006 F5H768 121 aa13.73□□□□□ -0.21
LINC01550-201ENST00000499006 RAB4BP61018 213 aa13.73□□□□□ -0.21
LINC01550-201ENST00000499006 RNF185Q96GF1 192 aa13.73□□□□□ -0.21
LINC01550-201ENST00000499006 CSMD3Q7Z407 3707 aa13.72□□□□□ -0.21
LINC01550-201ENST00000499006 FAM104BQ5XKR9 115 aa13.72□□□□□ -0.21
LINC01550-201ENST00000499006 TMEM136Q6ZRR5 245 aa13.72□□□□□ -0.21
LINC01550-201ENST00000499006 AMN1Q8IY45 258 aa13.72□□□□□ -0.21
LINC01550-201ENST00000499006 PHLDA1Q8WV24 401 aaPredicted RBP13.72□□□□□ -0.21
LINC01550-201ENST00000499006 HHLA3Q9XRX5 114 aa13.72□□□□□ -0.21
LINC01550-201ENST00000499006 MGPP08493 103 aa13.71□□□□□ -0.21
LINC01550-201ENST00000499006 RAB4AP20338 218 aa13.71□□□□□ -0.21
LINC01550-201ENST00000499006 ZNF56Q15929 161 aa13.71□□□□□ -0.21
LINC01550-201ENST00000499006 SLC25A29Q8N8R3 303 aa13.71□□□□□ -0.21
LINC01550-201ENST00000499006 WWC2-AS2Q96NR7 200 aa13.71□□□□□ -0.21
LINC01550-201ENST00000499006 PRO0255Q9UI72 69 aa13.71□□□□□ -0.21
LINC01550-201ENST00000499006 TRBV6-4A0A1B0GX49 114 aa13.7□□□□□ -0.22
LINC01550-201ENST00000499006 CRYBA4P53673 196 aa13.7□□□□□ -0.22
LINC01550-201ENST00000499006 SLAQ13239 276 aa13.7□□□□□ -0.22
LINC01550-201ENST00000499006 COX19Q49B96 90 aa13.7□□□□□ -0.22
LINC01550-201ENST00000499006 FAM210BQ96KR6 192 aa13.7□□□□□ -0.22
LINC01550-201ENST00000499006 GNB1LQ9BYB4 327 aa13.7□□□□□ -0.22
LINC01550-201ENST00000499006 DYNC2H1Q8NCM8 4307 aaKnown RBP13.7□□□□□ -0.22
LINC01550-201ENST00000499006 F5H697 171 aa13.69□□□□□ -0.22
LINC01550-201ENST00000499006 SUMO4Q6EEV6 95 aa13.69□□□□□ -0.22
LINC01550-201ENST00000499006 VSIG2Q96IQ7 327 aa13.69□□□□□ -0.22
LINC01550-201ENST00000499006 COLCA2A8K830 154 aa13.68□□□□□ -0.22
LINC01550-201ENST00000499006 FRZBQ92765 325 aa13.68□□□□□ -0.22
LINC01550-201ENST00000499006 TRAV26-1A0A087WT03 109 aa13.67□□□□□ -0.22
LINC01550-201ENST00000499006 K7EQD1 137 aa13.67□□□□□ -0.22
LINC01550-201ENST00000499006 M0QY20 66 aa13.67□□□□□ -0.22
LINC01550-201ENST00000499006 MRPL51Q4U2R6 128 aaKnown RBP13.67□□□□□ -0.22
LINC01550-201ENST00000499006 TRAV26-2A0A0B4J265 109 aa13.67□□□□□ -0.22
LINC01550-201ENST00000499006 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
LINC01550-201ENST00000499006 Q9UF83 564 aa13.67□□□□□ -0.22
LINC01550-201ENST00000499006 H3BNG1 76 aa13.66□□□□□ -0.22
LINC01550-201ENST00000499006 PAX4O43316 350 aa13.66□□□□□ -0.22
LINC01550-201ENST00000499006 MT-ND6P03923 174 aa13.66□□□□□ -0.22
LINC01550-201ENST00000499006 P0DMU3 169 aa13.66□□□□□ -0.22
LINC01550-201ENST00000499006 FAM231AP0DMU4 169 aa13.66□□□□□ -0.22
LINC01550-201ENST00000499006 FAM231CP0DMU5 169 aa13.66□□□□□ -0.22
LINC01550-201ENST00000499006 RHOHQ15669 191 aa13.66□□□□□ -0.22
LINC01550-201ENST00000499006 MRAP2Q96G30 205 aa13.66□□□□□ -0.22
LINC01550-201ENST00000499006 A0A0J9YY99 117 aa13.65□□□□□ -0.22
LINC01550-201ENST00000499006 TRBV10-1A0A0K0K1A3 114 aa13.65□□□□□ -0.22
LINC01550-201ENST00000499006 CEMP1Q6PRD7 247 aaPredicted RBP13.65□□□□□ -0.22
LINC01550-201ENST00000499006 MUC7Q8TAX7 377 aa13.65□□□□□ -0.22
LINC01550-201ENST00000499006 H7C1H1 209 aa13.64□□□□□ -0.23
LINC01550-201ENST00000499006 GAS8-AS1O95177 125 aa13.64□□□□□ -0.23
LINC01550-201ENST00000499006 PRADC1Q9BSG0 188 aa13.64□□□□□ -0.23
LINC01550-201ENST00000499006 STARD9Q9P2P6 4700 aa13.64□□□□□ -0.23
LINC01550-201ENST00000499006 LOC100131303A0A0U1RQF7 123 aa13.63□□□□□ -0.23
LINC01550-201ENST00000499006 NUPR2A6NF83 97 aa13.63□□□□□ -0.23
LINC01550-201ENST00000499006 NEXN-AS1Q8NBZ9 246 aa13.63□□□□□ -0.23
LINC01550-201ENST00000499006 APCSP02743 223 aa13.62□□□□□ -0.23
LINC01550-201ENST00000499006 GYPEP15421 78 aa13.62□□□□□ -0.23
LINC01550-201ENST00000499006 MRPL18Q9H0U6 180 aaKnown RBP13.62□□□□□ -0.23
LINC01550-201ENST00000499006 D6R8Y8 96 aa13.61□□□□□ -0.23
LINC01550-201ENST00000499006 SMKR1H3BMG3 65 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms