RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 TENM2Q9NT68 2774 aa11.63□□□□□ -0.55
LMNA-217ENST00000498722 RBMY1A1P0DJD3 496 aaKnown RBP11.62□□□□□ -0.55
LMNA-217ENST00000498722 RBMY1CP0DJD4 496 aa11.62□□□□□ -0.55
LMNA-217ENST00000498722 EMP1P54849 157 aa11.62□□□□□ -0.55
LMNA-217ENST00000498722 RBMY1FQ15415 496 aaKnown RBP11.62□□□□□ -0.55
LMNA-217ENST00000498722 C11orf45Q8TAV5 145 aa11.62□□□□□ -0.55
LMNA-217ENST00000498722 TMEM18Q96B42 140 aa11.62□□□□□ -0.55
LMNA-217ENST00000498722 LINC00467Q9BRT7 94 aa11.62□□□□□ -0.55
LMNA-217ENST00000498722 PPBPP02775 128 aa11.61□□□□□ -0.55
LMNA-217ENST00000498722 PDZD11Q5EBL8 140 aa11.61□□□□□ -0.55
LMNA-217ENST00000498722 AMN1Q8IY45 258 aa11.61□□□□□ -0.55
LMNA-217ENST00000498722 C1orf158Q8N1D5 194 aa11.61□□□□□ -0.55
LMNA-217ENST00000498722 MSRB1Q9NZV6 116 aa11.61□□□□□ -0.55
LMNA-217ENST00000498722 TP53TG3Q9ULZ0 132 aa11.61□□□□□ -0.55
LMNA-217ENST00000498722 IGHV3-16A0A0C4DH30 117 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 SMIM9A6NGZ8 99 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 CBY3A6NI87 242 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 SERF1AO75920 110 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 NXPH4O95158 308 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 NANOS2P60321 138 aaKnown RBP11.6□□□□□ -0.55
LMNA-217ENST00000498722 MRPL51Q4U2R6 128 aaKnown RBP11.6□□□□□ -0.55
LMNA-217ENST00000498722 ORMDL3Q8N138 153 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 TMEM256Q8N2U0 113 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 SYT8Q8NBV8 401 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 C9orf85Q96MD7 179 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 M0R381 172 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 FABP4P15090 132 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 HTN1P15515 57 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 RAB4AP20338 218 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 RRN3P1Q2M238 152 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 LINC01587Q99440 93 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 LAMTOR2Q9Y2Q5 125 aa11.6□□□□□ -0.55
LMNA-217ENST00000498722 IFITM10A6NMD0 228 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 D6R8Y8 96 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 CKS2P33552 79 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 IQCJQ1A5X6 159 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 PRELID3AQ96N28 172 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 DPH3P1Q9H4G8 78 aa11.59□□□□□ -0.55
LMNA-217ENST00000498722 CHCHD1Q96BP2 118 aaKnown RBP11.58□□□□□ -0.56
LMNA-217ENST00000498722 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.56
LMNA-217ENST00000498722 NUPR2A6NF83 97 aa11.57□□□□□ -0.56
LMNA-217ENST00000498722 PRM2P04554 102 aa11.57□□□□□ -0.56
LMNA-217ENST00000498722 EVI2AP22794 236 aa11.57□□□□□ -0.56
LMNA-217ENST00000498722 LINC00310P59036 64 aa11.57□□□□□ -0.56
LMNA-217ENST00000498722 ZNF415Q09FC8 603 aa11.57□□□□□ -0.56
LMNA-217ENST00000498722 PHLDA1Q8WV24 401 aaPredicted RBP11.57□□□□□ -0.56
LMNA-217ENST00000498722 MRAP2Q96G30 205 aa11.57□□□□□ -0.56
LMNA-217ENST00000498722 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
LMNA-217ENST00000498722 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
LMNA-217ENST00000498722 CSMD3Q7Z407 3707 aa11.56□□□□□ -0.56
LMNA-217ENST00000498722 NUPR1O60356 82 aa11.56□□□□□ -0.56
LMNA-217ENST00000498722 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
LMNA-217ENST00000498722 OR10D4PQ8NGN7 298 aa11.56□□□□□ -0.56
LMNA-217ENST00000498722 MDFICQ9P1T7 246 aa11.56□□□□□ -0.56
LMNA-217ENST00000498722 KMT2CQ8NEZ4 4911 aaKnown RBP11.55□□□□□ -0.56
LMNA-217ENST00000498722 HSBP1O75506 76 aa11.55□□□□□ -0.56
LMNA-217ENST00000498722 SPART-AS1P0CW21 52 aa11.55□□□□□ -0.56
LMNA-217ENST00000498722 RNASEKQ6P5S7 137 aaKnown RBP11.55□□□□□ -0.56
LMNA-217ENST00000498722 NIT1Q86X76 327 aa11.55□□□□□ -0.56
LMNA-217ENST00000498722 MUC4Q99102 2169 aa11.55□□□□□ -0.56
LMNA-217ENST00000498722 LINC00614P0C842 121 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 SMIM6P0DI80 62 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 PMCHP20382 165 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 PIK3CD-AS1Q5SR53 167 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 FAM222AQ5U5X8 452 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 CEMP1Q6PRD7 247 aaPredicted RBP11.54□□□□□ -0.56
LMNA-217ENST00000498722 PRSS3P2Q8NHM4 247 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 PTH2Q96A98 100 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 SPXQ9BT56 116 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
LMNA-217ENST00000498722 KLK5Q9Y337 293 aaPredicted RBP11.54□□□□□ -0.56
LMNA-217ENST00000498722 AMTP48728 403 aa11.53□□□□□ -0.56
LMNA-217ENST00000498722 Q6ZTC4 211 aa11.53□□□□□ -0.56
LMNA-217ENST00000498722 C14orf178Q8N769 122 aaPredicted RBP11.53□□□□□ -0.56
LMNA-217ENST00000498722 GSN-AS1Q9NRJ2 163 aa11.53□□□□□ -0.56
LMNA-217ENST00000498722 TEX48A0A1B0GUV7 120 aa11.52□□□□□ -0.57
LMNA-217ENST00000498722 NCR2O95944 276 aa11.52□□□□□ -0.57
LMNA-217ENST00000498722 PPP1R17O96001 155 aa11.52□□□□□ -0.57
LMNA-217ENST00000498722 MGPP08493 103 aa11.52□□□□□ -0.57
LMNA-217ENST00000498722 AZU1P20160 251 aa11.52□□□□□ -0.57
LMNA-217ENST00000498722 FA2HQ7L5A8 372 aa11.52□□□□□ -0.57
LMNA-217ENST00000498722 POM121L12Q8N7R1 296 aa11.52□□□□□ -0.57
LMNA-217ENST00000498722 C16orf74Q96GX8 76 aa11.52□□□□□ -0.57
LMNA-217ENST00000498722 SMKR1H3BMG3 65 aa11.51□□□□□ -0.57
LMNA-217ENST00000498722 M0R2P5 195 aa11.51□□□□□ -0.57
LMNA-217ENST00000498722 TNFRSF6BO95407 300 aa11.51□□□□□ -0.57
LMNA-217ENST00000498722 NPYP01303 97 aa11.51□□□□□ -0.57
LMNA-217ENST00000498722 C12orf74Q32Q52 190 aa11.51□□□□□ -0.57
LMNA-217ENST00000498722 LINC00518Q8N0U6 118 aa11.51□□□□□ -0.57
LMNA-217ENST00000498722 NDUFAF3Q9BU61 184 aa11.51□□□□□ -0.57
LMNA-217ENST00000498722 DKK2Q9UBU2 259 aa11.51□□□□□ -0.57
LMNA-217ENST00000498722 TRAV10A0A0B4J240 114 aa11.5□□□□□ -0.57
LMNA-217ENST00000498722 PRSS47A8MTI9 375 aa11.5□□□□□ -0.57
LMNA-217ENST00000498722 ZNF876PQ49A33 203 aa11.5□□□□□ -0.57
LMNA-217ENST00000498722 TMEM263Q8WUH6 116 aaKnown RBP11.5□□□□□ -0.57
LMNA-217ENST00000498722 URB1-AS1Q96HZ7 61 aa11.5□□□□□ -0.57
LMNA-217ENST00000498722 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms