RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 C9orf163Q8N9P6 203 aa8.94□□□□□ -0.98
CCDC58-207ENST00000498466 IL36BQ9NZH7 164 aa8.94□□□□□ -0.98
CCDC58-207ENST00000498466 H3BVH4 76 aa8.93□□□□□ -0.98
CCDC58-207ENST00000498466 CYCSP99999 105 aaKnown RBP8.93□□□□□ -0.98
CCDC58-207ENST00000498466 A0A087WWL8 130 aa8.92□□□□□ -0.98
CCDC58-207ENST00000498466 ANGP03950 147 aaKnown RBP8.92□□□□□ -0.98
CCDC58-207ENST00000498466 SUMO1P63165 101 aaKnown RBP8.92□□□□□ -0.98
CCDC58-207ENST00000498466 RPL36AP83881 106 aaKnown RBP8.92□□□□□ -0.98
CCDC58-207ENST00000498466 HSD17B11Q8NBQ5 300 aa8.92□□□□□ -0.98
CCDC58-207ENST00000498466 OR11H4Q8NGC9 324 aa8.92□□□□□ -0.98
CCDC58-207ENST00000498466 PPP1R1CQ8WVI7 109 aa8.92□□□□□ -0.98
CCDC58-207ENST00000498466 RPL36ALQ969Q0 106 aaKnown RBP8.92□□□□□ -0.98
CCDC58-207ENST00000498466 DPH3P1Q9H4G8 78 aa8.92□□□□□ -0.98
CCDC58-207ENST00000498466 EPDR1Q9UM22 224 aa8.92□□□□□ -0.98
CCDC58-207ENST00000498466 TRBV10-1A0A0K0K1A3 114 aa8.91□□□□□ -0.98
CCDC58-207ENST00000498466 FABP5P3A8MUU1 101 aa8.91□□□□□ -0.98
CCDC58-207ENST00000498466 B4DEV8 164 aa8.91□□□□□ -0.98
CCDC58-207ENST00000498466 RPL12P30050 165 aaKnown RBP8.91□□□□□ -0.98
CCDC58-207ENST00000498466 CDC34P49427 236 aaPredicted RBP8.91□□□□□ -0.98
CCDC58-207ENST00000498466 UBE2D3P61077 147 aa8.91□□□□□ -0.98
CCDC58-207ENST00000498466 UBE2D2P62837 147 aa8.91□□□□□ -0.98
CCDC58-207ENST00000498466 MPV17L2Q567V2 206 aa8.91□□□□□ -0.98
CCDC58-207ENST00000498466 MZT2BQ6NZ67 158 aa8.91□□□□□ -0.98
CCDC58-207ENST00000498466 TRBV7-3A0A075B6L6 115 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 TRBV6-8A0A0A6YYG3 113 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 ARMS2P0C7Q2 107 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 STAG3L2P0CL84 134 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 STAG3L3P0CL85 134 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 PET100P0DJ07 73 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 GCHFRP30047 84 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 RPL19P84098 196 aaKnown RBP8.9□□□□□ -0.98
CCDC58-207ENST00000498466 MIAQ16674 131 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 SDIM1Q6ZPB5 146 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 DPH3Q96FX2 82 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 SFRP2Q96HF1 295 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 WFDC1Q9HC57 220 aa8.9□□□□□ -0.98
CCDC58-207ENST00000498466 TRAV34A0A0B4J273 112 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 M0R036 132 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 M0R381 172 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 MPC2O95563 127 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 H2BFSP57053 126 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 SUN5Q8TC36 379 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 CCDC32Q9BV29 185 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 PHLDA3Q9Y5J5 127 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 ARL2-SNX15V9GYD0 113 aa8.89□□□□□ -0.99
CCDC58-207ENST00000498466 GRIFINA4D1Z8 144 aa8.88□□□□□ -0.99
CCDC58-207ENST00000498466 RAB24Q969Q5 203 aa8.88□□□□□ -0.99
CCDC58-207ENST00000498466 CHCHD5Q9BSY4 110 aa8.88□□□□□ -0.99
CCDC58-207ENST00000498466 KRBOX1C9JBD0 128 aa8.87□□□□□ -0.99
CCDC58-207ENST00000498466 PTTG1O95997 202 aa8.87□□□□□ -0.99
CCDC58-207ENST00000498466 TPT1P13693 172 aaKnown RBP8.87□□□□□ -0.99
CCDC58-207ENST00000498466 PKIAP61925 76 aa8.87□□□□□ -0.99
CCDC58-207ENST00000498466 DNLZQ5SXM8 178 aa8.87□□□□□ -0.99
CCDC58-207ENST00000498466 CLPSL2Q6UWE3 100 aa8.87□□□□□ -0.99
CCDC58-207ENST00000498466 ENKURQ8TC29 256 aa8.87□□□□□ -0.99
CCDC58-207ENST00000498466 TMEM167BQ9NRX6 74 aa8.87□□□□□ -0.99
CCDC58-207ENST00000498466 CIRBPQ14011 172 aaKnown RBP8.86□□□□□ -0.99
CCDC58-207ENST00000498466 CLRN3Q8NCR9 226 aa8.86□□□□□ -0.99
CCDC58-207ENST00000498466 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
CCDC58-207ENST00000498466 A0A087WYN8 130 aa8.85□□□□□ -0.99
CCDC58-207ENST00000498466 CXorf1O96002 111 aa8.85□□□□□ -0.99
CCDC58-207ENST00000498466 ZFP82Q8N141 532 aa8.85□□□□□ -0.99
CCDC58-207ENST00000498466 LINC00269Q8N2A0 174 aa8.85□□□□□ -0.99
CCDC58-207ENST00000498466 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.85□□□□□ -0.99
CCDC58-207ENST00000498466 IGHV3-64A0A075B6Q5 118 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 hDV102S1A0JD36 115 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 PHOX2AO14813 284 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 SH2D1AO60880 128 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 IFNA7P01567 189 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 CRIP1P50238 77 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 CNBPP62633 177 aaKnown RBP8.84□□□□□ -0.99
CCDC58-207ENST00000498466 ODF1Q14990 250 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 Q86TA4 180 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 NEXN-AS1Q8NBZ9 246 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 RNF185Q96GF1 192 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 PRR34Q9NV39 138 aa8.84□□□□□ -0.99
CCDC58-207ENST00000498466 A0A1W2PRE2 83 aa8.83□□□□□ -1
CCDC58-207ENST00000498466 RAB4BP61018 213 aa8.83□□□□□ -1
CCDC58-207ENST00000498466 RBX1P62877 108 aa8.83□□□□□ -1
CCDC58-207ENST00000498466 ZNF56Q15929 161 aa8.83□□□□□ -1
CCDC58-207ENST00000498466 FAM162BQ5T6X4 162 aa8.83□□□□□ -1
CCDC58-207ENST00000498466 C7orf33Q8WU49 177 aa8.83□□□□□ -1
CCDC58-207ENST00000498466 LINC01600Q96MT4 127 aa8.83□□□□□ -1
CCDC58-207ENST00000498466 IGLV10-54A0A075B6I4 117 aa8.82□□□□□ -1
CCDC58-207ENST00000498466 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
CCDC58-207ENST00000498466 INMT-MINDY4F8WBC2 141 aa8.82□□□□□ -1
CCDC58-207ENST00000498466 PEX7O00628 323 aa8.82□□□□□ -1
CCDC58-207ENST00000498466 SSNA1O43805 119 aa8.82□□□□□ -1
CCDC58-207ENST00000498466 MBP02144 154 aa8.82□□□□□ -1
CCDC58-207ENST00000498466 GAGE6Q13070 117 aa8.82□□□□□ -1
CCDC58-207ENST00000498466 SPACA4Q8TDM5 124 aa8.82□□□□□ -1
CCDC58-207ENST00000498466 ACTR3CQ9C0K3 210 aaPredicted RBP8.82□□□□□ -1
CCDC58-207ENST00000498466 AP5S1Q9NUS5 200 aa8.82□□□□□ -1
CCDC58-207ENST00000498466 UBE2G2P60604 165 aa8.81□□□□□ -1
CCDC58-207ENST00000498466 TMEM97Q5BJF2 176 aa8.81□□□□□ -1
CCDC58-207ENST00000498466 PSMG3Q9BT73 122 aaPredicted RBP8.81□□□□□ -1
CCDC58-207ENST00000498466 KIF25-AS1Q9Y6Z4 181 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms