RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 MYOZ3Q8TDC0 251 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 CLEC2BQ92478 149 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 AQP3Q92482 292 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 SPTSSAQ969W0 71 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 ODF3Q96PU9 254 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 MGST2Q99735 147 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 CXCL16Q9H2A7 254 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 NXT2Q9NPJ8 142 aaKnown RBP1.92□□□□□ -2.1
CALD1-224ENST00000498254 MANBALQ9NQG1 85 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 OSTCQ9NRP0 149 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 LINC00474Q9P2X8 69 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 HILPDAQ9Y5L2 63 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 ATP7BP35670 1465 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 CEP170Q5SW79 1584 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 PIK3C2AO00443 1686 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 PREX1Q8TCU6 1659 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 RGPD2P0DJD1 1756 aa1.92□□□□□ -2.1
CALD1-224ENST00000498254 ASXL1Q8IXJ9 1541 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 COL24A1Q17RW2 1714 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 CRYBG1Q9Y4K1 1723 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 PLXNB1O43157 2135 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 POLEQ07864 2286 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 EML6Q6ZMW3 1958 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 TRPM7Q96QT4 1865 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 TRAV14DV4A0A0A6YYC5 116 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 TRAV17A0A0B4J275 112 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 A0A1B0GU33 70 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 A0A1W2PQD3 144 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 C19orf71A6NCJ1 209 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 SNRPGP15A8MWD9 76 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 LEPROTO15243 131 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 HCRTO43612 131 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 C3orf79P0CE67 100 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 EFNA4P52798 201 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 TSPEAR-AS2P59090 65 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 FGF12P61328 243 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 PATE2Q6UY27 113 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 C2orf91Q6ZV80 131 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 COMMD6Q7Z4G1 85 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 SERP2Q8N6R1 65 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 HIGD2AQ9BW72 106 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 USP24Q9UPU5 2620 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 DSCAMO60469 2012 aa1.91□□□□□ -2.1
CALD1-224ENST00000498254 BAHCC1Q9P281 2608 aa1.9□□□□□ -2.1
CALD1-224ENST00000498254 ZNF407Q9C0G0 2248 aa1.9□□□□□ -2.1
CALD1-224ENST00000498254 ATAD5Q96QE3 1844 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 CCL16O15467 120 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 LY6HO94772 140 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 CCKP06307 115 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 CTSGP08311 255 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 CKS2P33552 79 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 ATP5EP56381 51 aaPredicted RBP1.9□□□□□ -2.11
CALD1-224ENST00000498254 RPL18Q07020 188 aaKnown RBP1.9□□□□□ -2.11
CALD1-224ENST00000498254 SDIM1Q6ZPB5 146 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 LYPD1Q8N2G4 141 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 FAM216BQ8N7L0 139 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 NABP2Q9BQ15 211 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 FAM103A1Q9BTL3 118 aaKnown RBP1.9□□□□□ -2.11
CALD1-224ENST00000498254 TAS2R4Q9NYW5 299 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 UBR1Q8IWV7 1749 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 ARHGEF28Q8N1W1 1705 aaKnown RBP1.9□□□□□ -2.11
CALD1-224ENST00000498254 CLTCL1P53675 1640 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 EXPH5Q8NEV8 1989 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 SCN8AQ9UQD0 1980 aa1.9□□□□□ -2.11
CALD1-224ENST00000498254 PDCD11Q14690 1871 aaKnown RBP1.9□□□□□ -2.11
CALD1-224ENST00000498254 MYO5AQ9Y4I1 1855 aaKnown RBP1.9□□□□□ -2.11
CALD1-224ENST00000498254 CLTCQ00610 1675 aaKnown RBP1.9□□□□□ -2.11
CALD1-224ENST00000498254 MED1Q15648 1581 aaPredicted RBP1.89□□□□□ -2.11
CALD1-224ENST00000498254 BTAF1O14981 1849 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 NUP98P52948 1817 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 POLR1AO95602 1720 aaPredicted RBP1.89□□□□□ -2.11
CALD1-224ENST00000498254 OBSL1O75147 1896 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 IGLV3-9A0A075B6K5 115 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 CRYM-AS1A6NIL9 109 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 C17orf98A8MV24 154 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 IBA57-AS1B1ANH7 110 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 J3QLW9 94 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 PIRTP0C851 137 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 IGHV3-30-3P0DP02 117 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 PRB4P10163 310 aaPredicted RBP1.89□□□□□ -2.11
CALD1-224ENST00000498254 COX8AP10176 69 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 CCL4P13236 92 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 DSCR4P56555 118 aaPredicted RBP1.89□□□□□ -2.11
CALD1-224ENST00000498254 SNRPFP62306 86 aaKnown RBP1.89□□□□□ -2.11
CALD1-224ENST00000498254 HIST1H4AP62805 103 aaKnown RBP1.89□□□□□ -2.11
CALD1-224ENST00000498254 DYNLT1P63172 113 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 RHOHQ15669 191 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 ZNF56Q15929 161 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 MIR17HGQ75NE6 70 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 TOMM5Q8N4H5 51 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 TRGV9Q99603 122 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 LY96Q9Y6Y9 160 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 MINOS1-NBL1R4GNA1 71 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 ARL2-SNX15V9GYD0 113 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 COL18A1P39060 1754 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 USP54Q70EL1 1684 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 NWD1Q149M9 1564 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 SAMD9Q5K651 1589 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 MROH2BQ7Z745 1585 aa1.89□□□□□ -2.11
CALD1-224ENST00000498254 ZFC3H1O60293 1989 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms