RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 A0A1B0GV50 99 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 RHODO00212 210 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 PSCAO43653 123 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 IGHV3-30P01768 117 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 IGHV3-33P01772 117 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 IGHV3-30-3P0DP02 117 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 IGHV3-30-5P0DP03 117 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 TPT1P13693 172 aaKnown RBP5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 EIF5AP63241 154 aaKnown RBP5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 UFSP1Q6NVU6 142 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 Q6ZSN1 163 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 SAMD10Q9BYL1 202 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 PHLDA3Q9Y5J5 127 aa5.71□□□□□ -1.5
HMGXB4-207ENST00000498212 TMSB15BA0A087X1C1 80 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 GAGE12JA6NER3 117 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 IBA57-AS1B1ANH7 110 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 M0R381 172 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 PFDN1O60925 122 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 S100A9P06702 114 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 H2AFB1P0C5Y9 115 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 LINC00694P0DN24 101 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 FUSP35637 526 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 GAGE1Q13065 139 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 GAGE4Q13068 117 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 GAGE5Q13069 117 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 GAGE13Q4V321 117 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 FAM74A4Q5TZK3 123 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 Q8N1X5 172 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 C14orf178Q8N769 122 aaPredicted RBP5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 SCRT2Q9NQ03 307 aa5.7□□□□□ -1.5
HMGXB4-207ENST00000498212 A0A087WWL8 130 aa5.69□□□□□ -1.5
HMGXB4-207ENST00000498212 TMUB2Q71RG4 321 aa5.69□□□□□ -1.5
HMGXB4-207ENST00000498212 ZFP82Q8N141 532 aa5.69□□□□□ -1.5
HMGXB4-207ENST00000498212 SFRP2Q96HF1 295 aa5.69□□□□□ -1.5
HMGXB4-207ENST00000498212 Q9HAA7 133 aa5.69□□□□□ -1.5
HMGXB4-207ENST00000498212 A0A087WWC5 75 aa5.68□□□□□ -1.5
HMGXB4-207ENST00000498212 LAGE3Q14657 143 aa5.68□□□□□ -1.5
HMGXB4-207ENST00000498212 BAGE2Q86Y30 109 aa5.68□□□□□ -1.5
HMGXB4-207ENST00000498212 MLST8Q9BVC4 326 aa5.68□□□□□ -1.5
HMGXB4-207ENST00000498212 MANBALQ9NQG1 85 aa5.68□□□□□ -1.5
HMGXB4-207ENST00000498212 Q9UF83 564 aa5.68□□□□□ -1.5
HMGXB4-207ENST00000498212 LRP1BQ9NZR2 4599 aa5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 LRCOL1A6NCL2 159 aa5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 CXCL1P09341 107 aa5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 RAB5CP51148 216 aa5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 RPL19P84098 196 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 EIF5AL1Q6IS14 154 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 PRR27Q6MZM9 219 aa5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 GNG13Q9P2W3 67 aa5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 HSPG2P98160 4391 aa5.67□□□□□ -1.5
HMGXB4-207ENST00000498212 TRBV10-1A0A0K0K1A3 114 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 TEX46H3BTG2 121 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 GCSHP23434 173 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 RPL35P42766 123 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 KRTAP10-1P60331 282 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 CCL20P78556 96 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 RPL36AP83881 106 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 ZNF56Q15929 161 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 TOR2AQ5JU69 321 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 DAZ4Q86SG3 579 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 Q8N814 137 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 OR10AG1Q8NH19 301 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 RPL36ALQ969Q0 106 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 TM2D2Q9BX73 214 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 DAZ3Q9NR90 486 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 URGCP-MRPS24S4R325 110 aa5.66□□□□□ -1.5
HMGXB4-207ENST00000498212 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 TRBV7-3A0A075B6L6 115 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 IGLV5-52A0A0A0MRZ9 124 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 TRAV8-3A0A0A6YYJ7 113 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 TRAV1-1A0A0B4J248 108 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 SNAI2O43623 268 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 OR5AL1P0C617 328 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 SULT1A2P50226 295 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 XGP55808 180 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 RAB4BP61018 213 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 SPANXN1Q5VSR9 72 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 TCTE3Q8IZS6 198 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 NTN5Q8WTR8 489 aaPredicted RBP5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 C11orf52Q96A22 123 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 DERL1Q9BUN8 251 aa5.65□□□□□ -1.5
HMGXB4-207ENST00000498212 DNAH5Q8TE73 4624 aa5.65□□□□□ -1.51
HMGXB4-207ENST00000498212 APOBP04114 4563 aaKnown RBP5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 MUC21A0A0G2JKD1 596 aa5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 MUC21A0A140T8X8 626 aa5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 EPM2AB3EWF7 344 aa5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 UBE2D3P61077 147 aa5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 UBE2D2P62837 147 aa5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 CENPWQ5EE01 88 aa5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 NIT1Q86X76 327 aa5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 OR10G8Q8NGN5 311 aa5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 SSBP4Q9BWG4 385 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-207ENST00000498212 A0A087WX48 190 aa5.63□□□□□ -1.51
HMGXB4-207ENST00000498212 PDE6DO43924 150 aa5.63□□□□□ -1.51
HMGXB4-207ENST00000498212 IFNA1P01562 189 aa5.63□□□□□ -1.51
HMGXB4-207ENST00000498212 C1QBP02746 253 aa5.63□□□□□ -1.51
HMGXB4-207ENST00000498212 SSTP61278 116 aa5.63□□□□□ -1.51
HMGXB4-207ENST00000498212 MEF2BQ02080 365 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-207ENST00000498212 KCNIP4Q6PIL6 250 aa5.63□□□□□ -1.51
HMGXB4-207ENST00000498212 SLC51BQ86UW2 128 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms