RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 FAM3BP58499 235 aaPredicted RBP11.14□□□□□ -0.63
SSBP1-214ENST00000498107 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
SSBP1-214ENST00000498107 FAM74A4Q5TZK3 123 aa11.14□□□□□ -0.63
SSBP1-214ENST00000498107 LYZL1Q6UWQ5 148 aa11.14□□□□□ -0.63
SSBP1-214ENST00000498107 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
SSBP1-214ENST00000498107 OR10G8Q8NGN5 311 aa11.14□□□□□ -0.63
SSBP1-214ENST00000498107 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
SSBP1-214ENST00000498107 JPT2Q9H910 190 aa11.14□□□□□ -0.63
SSBP1-214ENST00000498107 A0A096LPF7 62 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 TRGC1P0CF51 173 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 GYPEP15421 78 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 SRIP30626 198 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 UFSP1Q6NVU6 142 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 SLC25A29Q8N8R3 303 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 TSKUQ8WUA8 353 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 LYSTQ99698 3801 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 SAMD10Q9BYL1 202 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 ALMS1Q8TCU4 4167 aa11.13□□□□□ -0.63
SSBP1-214ENST00000498107 A0A087WWL8 130 aa11.12□□□□□ -0.63
SSBP1-214ENST00000498107 LINC00862A6NCI5 91 aa11.12□□□□□ -0.63
SSBP1-214ENST00000498107 CRYGDP07320 174 aa11.12□□□□□ -0.63
SSBP1-214ENST00000498107 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-214ENST00000498107 SSTP61278 116 aa11.12□□□□□ -0.63
SSBP1-214ENST00000498107 COMMD7Q86VX2 200 aa11.12□□□□□ -0.63
SSBP1-214ENST00000498107 CNFNQ9BYD5 112 aa11.12□□□□□ -0.63
SSBP1-214ENST00000498107 K7EQD1 137 aa11.11□□□□□ -0.63
SSBP1-214ENST00000498107 NEGR1Q7Z3B1 354 aa11.11□□□□□ -0.63
SSBP1-214ENST00000498107 GTSF1Q8WW33 167 aa11.11□□□□□ -0.63
SSBP1-214ENST00000498107 V9GYV3 84 aa11.11□□□□□ -0.63
SSBP1-214ENST00000498107 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
SSBP1-214ENST00000498107 NTF3P20783 257 aa11.1□□□□□ -0.63
SSBP1-214ENST00000498107 RAB4BP61018 213 aa11.1□□□□□ -0.63
SSBP1-214ENST00000498107 TWIST1Q15672 202 aa11.1□□□□□ -0.63
SSBP1-214ENST00000498107 SMIM15Q7Z3B0 74 aa11.1□□□□□ -0.63
SSBP1-214ENST00000498107 C14orf178Q8N769 122 aaPredicted RBP11.1□□□□□ -0.63
SSBP1-214ENST00000498107 TMEM218A2RU14 115 aa11.09□□□□□ -0.63
SSBP1-214ENST00000498107 HIGD1CA8MV81 97 aa11.09□□□□□ -0.63
SSBP1-214ENST00000498107 ZNF56Q15929 161 aa11.09□□□□□ -0.63
SSBP1-214ENST00000498107 PGLYRP4Q96LB8 373 aa11.09□□□□□ -0.63
SSBP1-214ENST00000498107 TRBV10-1A0A0K0K1A3 114 aa11.08□□□□□ -0.64
SSBP1-214ENST00000498107 F5H697 171 aa11.08□□□□□ -0.64
SSBP1-214ENST00000498107 F8W036 122 aa11.08□□□□□ -0.64
SSBP1-214ENST00000498107 NAT8BQ9UHF3 227 aa11.08□□□□□ -0.64
SSBP1-214ENST00000498107 SACSQ9NZJ4 4579 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 A0A1B0GUT8 65 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 MT-ND4LP03901 98 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 ESRGQ1W209 222 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 Q6ZSN1 163 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 SEC11CQ9BY50 192 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 DPH3P1Q9H4G8 78 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 MSRB1Q9NZV6 116 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 KIF25-AS1Q9Y6Z4 181 aa11.07□□□□□ -0.64
SSBP1-214ENST00000498107 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
SSBP1-214ENST00000498107 H7C1H1 209 aa11.06□□□□□ -0.64
SSBP1-214ENST00000498107 EVI2AP22794 236 aa11.06□□□□□ -0.64
SSBP1-214ENST00000498107 ANAPC16Q96DE5 110 aa11.06□□□□□ -0.64
SSBP1-214ENST00000498107 MRPS16Q9Y3D3 137 aaKnown RBP11.06□□□□□ -0.64
SSBP1-214ENST00000498107 DNAH1Q9P2D7 4330 aa11.05□□□□□ -0.64
SSBP1-214ENST00000498107 SMIM27A0A1W2PRY6 76 aa11.05□□□□□ -0.64
SSBP1-214ENST00000498107 MGPP08493 103 aa11.05□□□□□ -0.64
SSBP1-214ENST00000498107 TIRAPP58753 221 aa11.05□□□□□ -0.64
SSBP1-214ENST00000498107 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
SSBP1-214ENST00000498107 RIGQ13278 110 aa11.05□□□□□ -0.64
SSBP1-214ENST00000498107 LYPD5Q6UWN5 251 aa11.05□□□□□ -0.64
SSBP1-214ENST00000498107 ATP6V0E2Q8NHE4 81 aa11.05□□□□□ -0.64
SSBP1-214ENST00000498107 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
SSBP1-214ENST00000498107 UPK3BQ9BT76 320 aa11.05□□□□□ -0.64
SSBP1-214ENST00000498107 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
SSBP1-214ENST00000498107 GAGE1Q13065 139 aa11.04□□□□□ -0.64
SSBP1-214ENST00000498107 GAGE4Q13068 117 aa11.04□□□□□ -0.64
SSBP1-214ENST00000498107 GAGE5Q13069 117 aa11.04□□□□□ -0.64
SSBP1-214ENST00000498107 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
SSBP1-214ENST00000498107 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.04□□□□□ -0.64
SSBP1-214ENST00000498107 NUP35Q8NFH5 326 aa11.04□□□□□ -0.64
SSBP1-214ENST00000498107 RYR2Q92736 4967 aa11.03□□□□□ -0.64
SSBP1-214ENST00000498107 LINC00315P59091 139 aa11.03□□□□□ -0.64
SSBP1-214ENST00000498107 GTSF1LQ9H1H1 148 aa11.03□□□□□ -0.64
SSBP1-214ENST00000498107 TRBV7-3A0A075B6L6 115 aa11.02□□□□□ -0.65
SSBP1-214ENST00000498107 A0A1B0GW15 77 aa11.02□□□□□ -0.65
SSBP1-214ENST00000498107 LINC00694P0DN24 101 aa11.02□□□□□ -0.65
SSBP1-214ENST00000498107 ADCYAP1P18509 176 aa11.02□□□□□ -0.65
SSBP1-214ENST00000498107 ZNRF2Q8NHG8 242 aa11.02□□□□□ -0.65
SSBP1-214ENST00000498107 VPS13DQ5THJ4 4388 aa11.01□□□□□ -0.65
SSBP1-214ENST00000498107 S100A8P05109 93 aa11.01□□□□□ -0.65
SSBP1-214ENST00000498107 FRZBQ92765 325 aa11.01□□□□□ -0.65
SSBP1-214ENST00000498107 DNAJC30Q96LL9 226 aa11.01□□□□□ -0.65
SSBP1-214ENST00000498107 TMEM191AQ9H0A3 160 aa11.01□□□□□ -0.65
SSBP1-214ENST00000498107 Q9H8V8 135 aa11.01□□□□□ -0.65
SSBP1-214ENST00000498107 A0A087WWC5 75 aa11□□□□□ -0.65
SSBP1-214ENST00000498107 TRAV8-6A0A0B4J262 113 aa11□□□□□ -0.65
SSBP1-214ENST00000498107 M0QY20 66 aa11□□□□□ -0.65
SSBP1-214ENST00000498107 SUMO4Q6EEV6 95 aa11□□□□□ -0.65
SSBP1-214ENST00000498107 NEXN-AS1Q8NBZ9 246 aa11□□□□□ -0.65
SSBP1-214ENST00000498107 CTDSP1Q9GZU7 261 aa11□□□□□ -0.65
SSBP1-214ENST00000498107 UBE2D3P61077 147 aa10.99□□□□□ -0.65
SSBP1-214ENST00000498107 UBE2D2P62837 147 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms