RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ATP5J2P56134 94 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 C8orf31Q8N9H6 132 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 IGLV4-69A0A075B6H9 119 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 C16orf92Q96LL3 132 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 PMVKQ15126 192 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 FAM74A4Q5TZK3 123 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 TMEM190Q8WZ59 177 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 ZNF292O60281 2723 aa9.94□□□□□ -0.82
GAPVD1-220ENST00000497580 LOC107984640A0A0U1RRK4 108 aa9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 RPL11P62913 178 aaKnown RBP9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 CLEC2BQ92478 149 aa9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 A0A087WWL8 130 aa9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 CLEC19AQ6UXS0 136 aa9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 CENPEQ02224 2701 aa9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 SRSF2Q01130 221 aaKnown RBP9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 Q6ZSV7 163 aa9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 LINC01560Q8TB33 94 aa9.93□□□□□ -0.82
GAPVD1-220ENST00000497580 TRIAP1O43715 76 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 C9orf153Q5TBE3 101 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 ZNRF2Q8NHG8 242 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 ZNF580Q9UK33 172 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 MBD3L4A6NDZ8 208 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 MBD3L3A6NE82 208 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 MBD3L5A6NJ08 208 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 GNRH2O43555 120 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 TSHBP01222 138 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 ZNF883P0CG24 379 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 C15orf32Q32M92 178 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 MBD3L2Q8NHZ7 208 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 JPT2Q9H910 190 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 LGALS9O00182 355 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 LINC00694P0DN24 101 aa9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 KLK5Q9Y337 293 aaPredicted RBP9.92□□□□□ -0.82
GAPVD1-220ENST00000497580 TRAV8-3A0A0A6YYJ7 113 aa9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 TRAV12-3A0A0B4J271 114 aa9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 RNASE4P34096 147 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 TMEM263Q8WUH6 116 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 TRGV11A0A075B6L2 103 aa9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 OOSP1A8MZH6 123 aa9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 ZNF22P17026 224 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 RNASE6Q93091 150 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 PRR30Q53SZ7 412 aaPredicted RBP9.91□□□□□ -0.82
GAPVD1-220ENST00000497580 BUB3O43684 328 aa9.9□□□□□ -0.82
GAPVD1-220ENST00000497580 PAPPA-AS1Q5QFB9 102 aa9.9□□□□□ -0.82
GAPVD1-220ENST00000497580 DPM3Q9P2X0 92 aa9.9□□□□□ -0.82
GAPVD1-220ENST00000497580 RBAKDNA6NC62 111 aa9.9□□□□□ -0.82
GAPVD1-220ENST00000497580 A0A0G2JNJ9 132 aa9.9□□□□□ -0.83
GAPVD1-220ENST00000497580 ZNF672Q499Z4 452 aaPredicted RBP9.9□□□□□ -0.83
GAPVD1-220ENST00000497580 Q9UFV3 132 aa9.9□□□□□ -0.83
GAPVD1-220ENST00000497580 LINC00527Q9UJ94 153 aa9.9□□□□□ -0.83
GAPVD1-220ENST00000497580 CACNA1AO00555 2505 aa9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 CEMP1Q6PRD7 247 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 Q6Q795 121 aa9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 PSMG3-AS1Q96PY0 264 aa9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 USP9YO00507 2555 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 PIP4P1Q86T03 277 aa9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 EEF1AKMT3Q96AZ1 226 aa9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 F6UB75 175 aa9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 UBE2E1P51965 193 aa9.89□□□□□ -0.83
GAPVD1-220ENST00000497580 CELSR1Q9NYQ6 3014 aa9.88□□□□□ -0.83
GAPVD1-220ENST00000497580 RPL13AP40429 203 aaKnown RBP9.88□□□□□ -0.83
GAPVD1-220ENST00000497580 SPXQ9BT56 116 aa9.88□□□□□ -0.83
GAPVD1-220ENST00000497580 TLN2Q9Y4G6 2542 aa9.88□□□□□ -0.83
GAPVD1-220ENST00000497580 CD3EP07766 207 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 MYO9AB2RTY4 2548 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 H7C423 109 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 COX6CP09669 75 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 NUP37Q8NFH4 326 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 TMEM101Q96IK0 257 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 UBTD1Q9HAC8 227 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 METTL26Q96S19 204 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 LINC01587Q99440 93 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 MDFICQ9P1T7 246 aa9.87□□□□□ -0.83
GAPVD1-220ENST00000497580 SDHAF1A6NFY7 115 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 RS1O15537 224 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 PTPN13Q12923 2485 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 P0DMU3 169 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 FAM231AP0DMU4 169 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 FAM231CP0DMU5 169 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 DUX5Q96PT3 197 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 ICOSQ9Y6W8 199 aa9.86□□□□□ -0.83
GAPVD1-220ENST00000497580 TMEM126AQ9H061 195 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 TRAV21A0A0B4J279 112 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 A0A0U1RRA0 63 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 IGIPA6NJ69 53 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 M0R2P5 195 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 RNF5Q99942 180 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 KAAG1Q9UBP8 84 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 E7EQL1 145 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 G3V318 75 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
GAPVD1-220ENST00000497580 AMELXQ99217 191 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms