RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	PRNT	Q86SH4	94 aa		10.68	□□□□□ -0.7
SUPT20H-223	ENST00000497318	AQP10	Q96PS8	301 aa		10.68	□□□□□ -0.7
SUPT20H-223	ENST00000497318	TRAV34	A0A0B4J273	112 aa		10.67	□□□□□ -0.7
SUPT20H-223	ENST00000497318	RHOD	O00212	210 aa		10.67	□□□□□ -0.7
SUPT20H-223	ENST00000497318	CRP	P02741	224 aa		10.67	□□□□□ -0.7
SUPT20H-223	ENST00000497318	ZNF726P1	Q15940	193 aa		10.67	□□□□□ -0.7
SUPT20H-223	ENST00000497318	SMUG1	Q53HV7	270 aa		10.67	□□□□□ -0.7
SUPT20H-223	ENST00000497318	C14orf178	Q8N769	122 aa	Predicted RBP	10.67	□□□□□ -0.7
SUPT20H-223	ENST00000497318	C5orf17	Q8NAS9	161 aa		10.67	□□□□□ -0.7
SUPT20H-223	ENST00000497318	EPDR1	Q9UM22	224 aa		10.67	□□□□□ -0.7
SUPT20H-223	ENST00000497318	USP17L23	D6RBM5	183 aa		10.66	□□□□□ -0.7
SUPT20H-223	ENST00000497318	TMEM262	E9PQX1	116 aa		10.66	□□□□□ -0.7
SUPT20H-223	ENST00000497318	RPL7L1	Q6DKI1	246 aa	Known RBP	10.66	□□□□□ -0.7
SUPT20H-223	ENST00000497318	C9orf163	Q8N9P6	203 aa		10.66	□□□□□ -0.7
SUPT20H-223	ENST00000497318	PSMG3	Q9BT73	122 aa	Predicted RBP	10.66	□□□□□ -0.7
SUPT20H-223	ENST00000497318	MED28	Q9H204	178 aa		10.66	□□□□□ -0.7
SUPT20H-223	ENST00000497318		Q9UF83	564 aa		10.66	□□□□□ -0.7
SUPT20H-223	ENST00000497318	ASIP	P42127	132 aa		10.65	□□□□□ -0.7
SUPT20H-223	ENST00000497318	FLI1	Q01543	452 aa	Predicted RBP	10.65	□□□□□ -0.7
SUPT20H-223	ENST00000497318	SAPCD1	Q5SSQ6	148 aa		10.64	□□□□□ -0.71
SUPT20H-223	ENST00000497318	UFSP1	Q6NVU6	142 aa		10.64	□□□□□ -0.71
SUPT20H-223	ENST00000497318	DPH3	Q96FX2	82 aa		10.64	□□□□□ -0.71
SUPT20H-223	ENST00000497318	JPT2	Q9H910	190 aa		10.64	□□□□□ -0.71
SUPT20H-223	ENST00000497318	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.64	□□□□□ -0.71
SUPT20H-223	ENST00000497318	IGKV3D-20	A0A0C4DH25	116 aa		10.63	□□□□□ -0.71
SUPT20H-223	ENST00000497318	UBE2G2	P60604	165 aa		10.63	□□□□□ -0.71
SUPT20H-223	ENST00000497318	RPL19	P84098	196 aa	Known RBP	10.63	□□□□□ -0.71
SUPT20H-223	ENST00000497318	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.63	□□□□□ -0.71
SUPT20H-223	ENST00000497318	CXorf1	O96002	111 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	HLA-DQA1	P01909	254 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	PRSS1	P07477	247 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	PKIA	P61925	76 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	RPL36A	P83881	106 aa	Known RBP	10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	SERF2	P84101	59 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	ENHO	Q6UWT2	76 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	SDIM1	Q6ZPB5	146 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	C15orf54	Q8N8G6	183 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	RPL36AL	Q969Q0	106 aa	Known RBP	10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	TMEM167B	Q9NRX6	74 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	TNFSF18	Q9UNG2	199 aa		10.62	□□□□□ -0.71
SUPT20H-223	ENST00000497318	FXYD6-FXYD2	A0A087WZ82	144 aa		10.61	□□□□□ -0.71
SUPT20H-223	ENST00000497318	TRBV10-1	A0A0K0K1A3	114 aa		10.61	□□□□□ -0.71
SUPT20H-223	ENST00000497318		G3V3Q6	166 aa		10.61	□□□□□ -0.71
SUPT20H-223	ENST00000497318	PTTG1	O95997	202 aa		10.61	□□□□□ -0.71
SUPT20H-223	ENST00000497318	FAM74A4	Q5TZK3	123 aa		10.61	□□□□□ -0.71
SUPT20H-223	ENST00000497318	IL36B	Q9NZH7	164 aa		10.61	□□□□□ -0.71
SUPT20H-223	ENST00000497318	ARL2-SNX15	V9GYD0	113 aa		10.61	□□□□□ -0.71
SUPT20H-223	ENST00000497318	MB	P02144	154 aa		10.6	□□□□□ -0.71
SUPT20H-223	ENST00000497318	ANG	P03950	147 aa	Known RBP	10.6	□□□□□ -0.71
SUPT20H-223	ENST00000497318	GIP	P09681	153 aa	Predicted RBP	10.6	□□□□□ -0.71
SUPT20H-223	ENST00000497318	CRIP1	P50238	77 aa		10.6	□□□□□ -0.71
SUPT20H-223	ENST00000497318	MIA	Q16674	131 aa		10.6	□□□□□ -0.71
SUPT20H-223	ENST00000497318	CLRN3	Q8NCR9	226 aa		10.6	□□□□□ -0.71
SUPT20H-223	ENST00000497318	TRBV7-3	A0A075B6L6	115 aa		10.59	□□□□□ -0.71
SUPT20H-223	ENST00000497318	FABP5P3	A8MUU1	101 aa		10.59	□□□□□ -0.71
SUPT20H-223	ENST00000497318	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.59	□□□□□ -0.71
SUPT20H-223	ENST00000497318	OR11H4	Q8NGC9	324 aa		10.59	□□□□□ -0.71
SUPT20H-223	ENST00000497318	RNF185	Q96GF1	192 aa		10.59	□□□□□ -0.71
SUPT20H-223	ENST00000497318	TRBV6-8	A0A0A6YYG3	113 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318		A0A1W2PRE2	83 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318	GRIFIN	A4D1Z8	144 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318	FAM74A7	A6NL05	159 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318	IFNA7	P01567	189 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318	UBE2D3	P61077	147 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318	UBE2D2	P62837	147 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318		Q86TA4	180 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318	BATF3	Q9NR55	127 aa		10.58	□□□□□ -0.72
SUPT20H-223	ENST00000497318	CTXND1	A0A1B0GTU2	59 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318		B4DEV8	164 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318	SMLR1	H3BR10	107 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318		H3BVH4	76 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318	PANO1	I0J062	215 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318		M0R036	132 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318	PEX7	O00628	323 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318	CYTL1	Q9NRR1	136 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318	TNXB	P22105	4242 aa		10.57	□□□□□ -0.72
SUPT20H-223	ENST00000497318		A0A087WWL8	130 aa		10.56	□□□□□ -0.72
SUPT20H-223	ENST00000497318	CIRBP	Q14011	172 aa	Known RBP	10.56	□□□□□ -0.72
SUPT20H-223	ENST00000497318	C7orf33	Q8WU49	177 aa		10.56	□□□□□ -0.72
SUPT20H-223	ENST00000497318	SFRP2	Q96HF1	295 aa		10.56	□□□□□ -0.72
SUPT20H-223	ENST00000497318	LINC01600	Q96MT4	127 aa		10.56	□□□□□ -0.72
SUPT20H-223	ENST00000497318	CHCHD5	Q9BSY4	110 aa		10.56	□□□□□ -0.72
SUPT20H-223	ENST00000497318	PHLDA3	Q9Y5J5	127 aa		10.56	□□□□□ -0.72
SUPT20H-223	ENST00000497318	IGHV3-64	A0A075B6Q5	118 aa		10.55	□□□□□ -0.72
SUPT20H-223	ENST00000497318	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.55	□□□□□ -0.72
SUPT20H-223	ENST00000497318	KRBOX1	C9JBD0	128 aa		10.55	□□□□□ -0.72
SUPT20H-223	ENST00000497318	SH2D1A	O60880	128 aa		10.55	□□□□□ -0.72
SUPT20H-223	ENST00000497318	ARMS2	P0C7Q2	107 aa		10.55	□□□□□ -0.72
SUPT20H-223	ENST00000497318	MPV17L2	Q567V2	206 aa		10.55	□□□□□ -0.72
SUPT20H-223	ENST00000497318	TMSB15B	A0A087X1C1	80 aa		10.54	□□□□□ -0.72
SUPT20H-223	ENST00000497318	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.54	□□□□□ -0.72
SUPT20H-223	ENST00000497318	FHIT	P49789	147 aa		10.54	□□□□□ -0.72
SUPT20H-223	ENST00000497318	CNBP	P62633	177 aa	Known RBP	10.54	□□□□□ -0.72
SUPT20H-223	ENST00000497318	DNLZ	Q5SXM8	178 aa		10.54	□□□□□ -0.72
SUPT20H-223	ENST00000497318		A0A087WYN8	130 aa		10.53	□□□□□ -0.72
SUPT20H-223	ENST00000497318	ARPC5	O15511	151 aa		10.53	□□□□□ -0.72
SUPT20H-223	ENST00000497318	TPT1	P13693	172 aa	Known RBP	10.53	□□□□□ -0.72
SUPT20H-223	ENST00000497318	OR10G8	Q8NGN5	311 aa		10.53	□□□□□ -0.72
SUPT20H-223	ENST00000497318	AP5S1	Q9NUS5	200 aa		10.53	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms