RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 EIF5AL1Q6IS14 154 aaKnown RBP1.12□□□□□ -2.23
UBR4-217ENST00000497018 SOSTDC1Q6X4U4 206 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 TMEM91Q6ZNR0 172 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 Q6ZQT0 140 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 Q6ZS92 163 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 C7orf65Q6ZTY9 151 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 CROCCP2Q86T23 111 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 TEN1Q86WV5 123 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 RPS19BP1Q86WX3 136 aaKnown RBP1.12□□□□□ -2.23
UBR4-217ENST00000497018 Q8IYB0 196 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 MMGT1Q8N4V1 131 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 RNF182Q8N6D2 247 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 TCTEX1D1Q8N7M0 179 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 OR10AC1Q8NH08 325 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 CCL4L1Q8NHW4 92 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 BRK1Q8WUW1 75 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 MRPS24Q96EL2 167 aaKnown RBP1.12□□□□□ -2.23
UBR4-217ENST00000497018 DPH3Q96FX2 82 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 PPP3R2Q96LZ3 170 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 OR4C12Q96R67 309 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 KRTAP4-11Q9BYQ6 195 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 CST9LQ9H4G1 147 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 PRR34Q9NV39 138 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 DNAJC15Q9Y5T4 150 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 FREM1Q5H8C1 2179 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 ARID1AO14497 2285 aa1.12□□□□□ -2.23
UBR4-217ENST00000497018 CADP27708 2225 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 DOCK4Q8N1I0 1966 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 TRAV27A0A087WT01 109 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 TRGV5A0A0B4J1U4 118 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 A0A0D9SG52 128 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 C7orf71A4D174 169 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 TMEM235A6NFC5 223 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 OR2T8A6NH00 312 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 C11orf86A6NJI1 115 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 CCDC179H3BU77 68 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 UQCRQO14949 82 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 RER1O15258 196 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 CCL25O15444 150 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 GNRH2O43555 120 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 NDUFB3O43676 98 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 ZNF737O75373 536 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 TCL1BO95988 128 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 IGLV1-51P01701 117 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 HBDP02042 147 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 IFNA4P05014 189 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 IL4P05112 153 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 CTSDP07339 412 aaPredicted RBP1.11□□□□□ -2.23
UBR4-217ENST00000497018 CRYGAP11844 174 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 DEFA4P12838 97 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 HLA-DRB4P13762 266 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 ZNF93P35789 620 aaPredicted RBP1.11□□□□□ -2.23
UBR4-217ENST00000497018 FXYD2P54710 66 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 PLGLB1Q02325 96 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 LGALSLQ3ZCW2 172 aaPredicted RBP1.11□□□□□ -2.23
UBR4-217ENST00000497018 HSD17B12Q53GQ0 312 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 LINC00483Q53H64 154 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 TMEM136Q6ZRR5 245 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.11□□□□□ -2.23
UBR4-217ENST00000497018 OR5H6Q8NGV6 325 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 AQP3Q92482 292 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 PRELID3AQ96N28 172 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 AP1S3Q96PC3 154 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 OR8B2Q96RD0 313 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 MIEN1Q9BRT3 115 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 KRTAP2-2Q9BYT5 123 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 BANF2Q9H503 90 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 TXNL4BQ9NX01 149 aaKnown RBP1.11□□□□□ -2.23
UBR4-217ENST00000497018 BOKQ9UMX3 212 aaPredicted RBP1.11□□□□□ -2.23
UBR4-217ENST00000497018 R4GN34 69 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 MINOS1-NBL1R4GNA1 71 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 HLA-DRB4X5D2U9 266 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 DMBT1Q9UGM3 2413 aaPredicted RBP1.11□□□□□ -2.23
UBR4-217ENST00000497018 ANAPC1Q9H1A4 1944 aa1.11□□□□□ -2.23
UBR4-217ENST00000497018 STAB2Q8WWQ8 2551 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 IGLV3-16A0A075B6K0 115 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 IGLV3-12A0A075B6K2 115 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 IGHV1-18A0A0C4DH31 117 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 TRBV10-2A0A0K0K1G8 114 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 COLCA2A8K830 154 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 A8MWV9 139 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 H7C2G1 150 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 OR1I1O60431 355 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 CREBL2O60519 120 aaPredicted RBP1.1□□□□□ -2.23
UBR4-217ENST00000497018 CPSF4O95639 269 aaKnown RBP1.1□□□□□ -2.23
UBR4-217ENST00000497018 S100A8P05109 93 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 TRGC1P0CF51 173 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 COX6A1P12074 109 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 FGF7P21781 194 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 NFYAP23511 347 aaPredicted RBP1.1□□□□□ -2.23
UBR4-217ENST00000497018 BTG2P78543 158 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 MRPS10P82664 201 aaKnown RBP1.1□□□□□ -2.23
UBR4-217ENST00000497018 RELAQ04206 551 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 TFF3Q07654 80 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 NNATQ16517 81 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 FAM27BQ5VT28 67 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 SPINT4Q6UDR6 99 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 LCN15Q6UWW0 184 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 AAED1Q7RTV5 226 aa1.1□□□□□ -2.23
UBR4-217ENST00000497018 FAM216BQ8N7L0 139 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms