RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 SBF1O95248 1867 aa6.42□□□□□ -1.38
NPHP1-211ENST00000496524 TEX49A0A1B0GTD5 131 aa6.42□□□□□ -1.38
NPHP1-211ENST00000496524 LYPD2Q6UXB3 125 aa6.42□□□□□ -1.38
NPHP1-211ENST00000496524 GTSF1Q8WW33 167 aa6.42□□□□□ -1.38
NPHP1-211ENST00000496524 CDPF1Q6NVV7 123 aa6.42□□□□□ -1.38
NPHP1-211ENST00000496524 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 Q8NFD4 153 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 PLXND1Q9Y4D7 1925 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 SLX1AQ9BQ83 275 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 HHLA3Q9XRX5 114 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 LCTP09848 1927 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 IGKV1-6A0A0C4DH72 117 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 UFSP1Q6NVU6 142 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 TRBV30A0A0K0K1B3 111 aa6.41□□□□□ -1.38
NPHP1-211ENST00000496524 C17orf58Q2M2W7 97 aa6.4□□□□□ -1.38
NPHP1-211ENST00000496524 NRXN2Q9P2S2 1712 aa6.4□□□□□ -1.38
NPHP1-211ENST00000496524 HELZP42694 1942 aaKnown RBP6.4□□□□□ -1.38
NPHP1-211ENST00000496524 A0A0G2JNJ9 132 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 TRBV10-1A0A0K0K1A3 114 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 TRBV6-1A0A0K0K1D8 114 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 Q9UFV3 132 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 H7C423 109 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 CTRLP40313 264 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 ZNF524Q96C55 264 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 IGHV3-30-3P0DP02 117 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 Q6ZS92 163 aa6.4□□□□□ -1.39
NPHP1-211ENST00000496524 CACNA1BQ00975 2339 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 LOXP28300 417 aaPredicted RBP6.39□□□□□ -1.39
NPHP1-211ENST00000496524 MED12LQ86YW9 2145 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 A0A0J9YXY3 114 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 SMIM9A6NGZ8 99 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 A0A0G2JMZ2 1700 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 LRRC37A2A6NM11 1700 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 LRRC37AA6NMS7 1700 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 PLXNB1O43157 2135 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 COL8A2P25067 703 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 RNF185Q96GF1 192 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 G3V318 75 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 C9orf66Q5T8R8 295 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 DAND5Q8N907 189 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 PLCE1Q9P212 2302 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 UBE2D2P62837 147 aa6.39□□□□□ -1.39
NPHP1-211ENST00000496524 CSRP1P21291 193 aaKnown RBP6.39□□□□□ -1.39
NPHP1-211ENST00000496524 FAM222AQ5U5X8 452 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 WFDC10BQ8IUB3 73 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 SCN10AQ9Y5Y9 1956 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 IGLV10-54A0A075B6I4 117 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 LOXL1Q08397 574 aaPredicted RBP6.38□□□□□ -1.39
NPHP1-211ENST00000496524 DEFB112Q30KQ8 113 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 NRACQ8N912 160 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 A0A0J9YY99 117 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 M0QXV9 152 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 KAAG1Q9UBP8 84 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.38□□□□□ -1.39
NPHP1-211ENST00000496524 K7ENP7 123 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 BRCA1P38398 1863 aaKnown RBP6.38□□□□□ -1.39
NPHP1-211ENST00000496524 IGHV4-59P01825 116 aa6.38□□□□□ -1.39
NPHP1-211ENST00000496524 C5orf24Q7Z6I8 188 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 PINLYPA6NC86 204 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 C15orf65H3BRN8 121 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 CCL24O00175 119 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 FLVCR1-AS1Q8TAF5 88 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 E7EQL1 145 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 MIFP14174 115 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 WFDC10AQ9H1F0 79 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 C9orf85Q96MD7 179 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 LINC00694P0DN24 101 aa6.37□□□□□ -1.39
NPHP1-211ENST00000496524 RPL39P62891 51 aaKnown RBP6.36□□□□□ -1.39
NPHP1-211ENST00000496524 RLFQ13129 1914 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 IBA57-AS1B1ANH7 110 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 GP9P14770 177 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 NPBQ8NG41 125 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 LINC00173Q6ZV60 143 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 ZFAND3Q9H8U3 227 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 TANC2Q9HCD6 1990 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.36□□□□□ -1.39
NPHP1-211ENST00000496524 NFE4Q86UQ8 179 aa6.36□□□□□ -1.39
NPHP1-211ENST00000496524 NUPR1O60356 82 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 RUSC1-AS1Q66K80 236 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 C20orf203Q8NBC4 194 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 YPEL4Q96NS1 127 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 PLXNA2O75051 1894 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 CCKP06307 115 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 GPHB5Q86YW7 130 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 SP5Q6BEB4 398 aaPredicted RBP6.35□□□□□ -1.39
NPHP1-211ENST00000496524 IGLV3-9A0A075B6K5 115 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 ROS1P08922 2347 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 EML5Q05BV3 1969 aa6.35□□□□□ -1.39
NPHP1-211ENST00000496524 ZNF581Q9P0T4 197 aa6.34□□□□□ -1.39
NPHP1-211ENST00000496524 THSD7AQ9UPZ6 1657 aa6.34□□□□□ -1.39
NPHP1-211ENST00000496524 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.39
NPHP1-211ENST00000496524 COLQQ9Y215 455 aaPredicted RBP6.34□□□□□ -1.39
NPHP1-211ENST00000496524 KLK5Q9Y337 293 aaPredicted RBP6.34□□□□□ -1.4
NPHP1-211ENST00000496524 VPREB3Q9UKI3 123 aa6.33□□□□□ -1.4
NPHP1-211ENST00000496524 IGHV3-30P01768 117 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms