RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 NIT1Q86X76 327 aa8.56□□□□□ -1.04
USF1-207ENST00000496363 OR11H4Q8NGC9 324 aa8.56□□□□□ -1.04
USF1-207ENST00000496363 HMCN2Q8NDA2 5059 aa8.55□□□□□ -1.04
USF1-207ENST00000496363 IGKV2D-24A0A075B6R9 120 aa8.55□□□□□ -1.04
USF1-207ENST00000496363 TMSB15BA0A087X1C1 80 aa8.55□□□□□ -1.04
USF1-207ENST00000496363 RHODO00212 210 aa8.55□□□□□ -1.04
USF1-207ENST00000496363 DNLZQ5SXM8 178 aa8.55□□□□□ -1.04
USF1-207ENST00000496363 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
USF1-207ENST00000496363 SYT8Q8NBV8 401 aa8.55□□□□□ -1.04
USF1-207ENST00000496363 INO80EQ8NBZ0 244 aaPredicted RBP8.55□□□□□ -1.04
USF1-207ENST00000496363 KLK12Q9UKR0 248 aa8.55□□□□□ -1.04
USF1-207ENST00000496363 FXYD6-FXYD2A0A087WZ82 144 aa8.54□□□□□ -1.04
USF1-207ENST00000496363 BORCS7-ASMTA0A0B4J1R7 106 aa8.54□□□□□ -1.04
USF1-207ENST00000496363 M0R381 172 aa8.54□□□□□ -1.04
USF1-207ENST00000496363 GIPP09681 153 aaPredicted RBP8.54□□□□□ -1.04
USF1-207ENST00000496363 UBE2WQ96B02 151 aa8.54□□□□□ -1.04
USF1-207ENST00000496363 SFRP2Q96HF1 295 aa8.54□□□□□ -1.04
USF1-207ENST00000496363 URGCP-MRPS24S4R325 110 aa8.54□□□□□ -1.04
USF1-207ENST00000496363 RBFOX3A6NFN3 312 aa8.53□□□□□ -1.04
USF1-207ENST00000496363 PTTG1O95997 202 aa8.53□□□□□ -1.04
USF1-207ENST00000496363 FAM162BQ5T6X4 162 aa8.53□□□□□ -1.04
USF1-207ENST00000496363 HIST1H2BAQ96A08 127 aa8.53□□□□□ -1.04
USF1-207ENST00000496363 RMI2Q96E14 147 aa8.53□□□□□ -1.04
USF1-207ENST00000496363 PHLDA3Q9Y5J5 127 aa8.53□□□□□ -1.04
USF1-207ENST00000496363 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
USF1-207ENST00000496363 MAP1LC3B2A6NCE7 125 aa8.52□□□□□ -1.05
USF1-207ENST00000496363 TPT1P13693 172 aaKnown RBP8.52□□□□□ -1.05
USF1-207ENST00000496363 AKR1C8PQ5T2L2 129 aa8.52□□□□□ -1.05
USF1-207ENST00000496363 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
USF1-207ENST00000496363 Q8N976 141 aa8.52□□□□□ -1.05
USF1-207ENST00000496363 MAP1LC3BQ9GZQ8 125 aa8.52□□□□□ -1.05
USF1-207ENST00000496363 A0A087WX48 190 aa8.51□□□□□ -1.05
USF1-207ENST00000496363 KRTAP29-1A8MX34 341 aaPredicted RBP8.51□□□□□ -1.05
USF1-207ENST00000496363 UBE2D3P61077 147 aa8.51□□□□□ -1.05
USF1-207ENST00000496363 UBE2G1P62253 170 aa8.51□□□□□ -1.05
USF1-207ENST00000496363 UBE2D2P62837 147 aa8.51□□□□□ -1.05
USF1-207ENST00000496363 ZNF674Q2M3X9 581 aa8.51□□□□□ -1.05
USF1-207ENST00000496363 LINC01559Q495D7 138 aa8.51□□□□□ -1.05
USF1-207ENST00000496363 FMC1Q96HJ9 113 aa8.51□□□□□ -1.05
USF1-207ENST00000496363 NKX6-2Q9C056 277 aaPredicted RBP8.51□□□□□ -1.05
USF1-207ENST00000496363 ZFP30Q9Y2G7 519 aa8.51□□□□□ -1.05
USF1-207ENST00000496363 G3V3Q6 166 aa8.5□□□□□ -1.05
USF1-207ENST00000496363 LTAP01374 205 aa8.5□□□□□ -1.05
USF1-207ENST00000496363 KRTAP10-4P60372 401 aaPredicted RBP8.5□□□□□ -1.05
USF1-207ENST00000496363 ZFP82Q8N141 532 aa8.5□□□□□ -1.05
USF1-207ENST00000496363 DEFB104AQ8WTQ1 72 aa8.5□□□□□ -1.05
USF1-207ENST00000496363 CHAC1Q9BUX1 264 aa8.5□□□□□ -1.05
USF1-207ENST00000496363 TRBV10-1A0A0K0K1A3 114 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 TRBV6-1A0A0K0K1D8 114 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 SEC11BP0C7V7 166 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 AKR1C3P42330 323 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 FHITP49789 147 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 RPL36AP83881 106 aaKnown RBP8.49□□□□□ -1.05
USF1-207ENST00000496363 RPL19P84098 196 aaKnown RBP8.49□□□□□ -1.05
USF1-207ENST00000496363 CST9LP1Q5W188 147 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 ATRAIDQ6UW56 229 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 CIRBP-AS1Q8TBR5 109 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 RPL36ALQ969Q0 106 aaKnown RBP8.49□□□□□ -1.05
USF1-207ENST00000496363 CYTL1Q9NRR1 136 aa8.49□□□□□ -1.05
USF1-207ENST00000496363 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
USF1-207ENST00000496363 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
USF1-207ENST00000496363 ELOBQ15370 118 aa8.48□□□□□ -1.05
USF1-207ENST00000496363 KCNIP4Q6PIL6 250 aa8.48□□□□□ -1.05
USF1-207ENST00000496363 ENHOQ6UWT2 76 aa8.48□□□□□ -1.05
USF1-207ENST00000496363 OR10AG1Q8NH19 301 aa8.48□□□□□ -1.05
USF1-207ENST00000496363 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
USF1-207ENST00000496363 ARPC5O15511 151 aa8.47□□□□□ -1.05
USF1-207ENST00000496363 ZNF56Q15929 161 aa8.47□□□□□ -1.05
USF1-207ENST00000496363 MPV17L2Q567V2 206 aa8.47□□□□□ -1.05
USF1-207ENST00000496363 C15orf54Q8N8G6 183 aa8.47□□□□□ -1.05
USF1-207ENST00000496363 NEXN-AS1Q8NBZ9 246 aa8.47□□□□□ -1.05
USF1-207ENST00000496363 OR10G8Q8NGN5 311 aa8.47□□□□□ -1.05
USF1-207ENST00000496363 C1orf43Q9BWL3 253 aa8.47□□□□□ -1.05
USF1-207ENST00000496363 TRBV6-8A0A0A6YYG3 113 aa8.46□□□□□ -1.06
USF1-207ENST00000496363 MUC21A0A0G2JKD1 596 aa8.46□□□□□ -1.06
USF1-207ENST00000496363 MUC21A0A140T8X8 626 aa8.46□□□□□ -1.06
USF1-207ENST00000496363 A0A1B0GV50 99 aa8.46□□□□□ -1.06
USF1-207ENST00000496363 PAGE4O60829 102 aa8.46□□□□□ -1.06
USF1-207ENST00000496363 Q0VG73 95 aa8.46□□□□□ -1.06
USF1-207ENST00000496363 STOML3Q8TAV4 291 aa8.46□□□□□ -1.06
USF1-207ENST00000496363 SCO2A0A1W2PP80 73 aa8.45□□□□□ -1.06
USF1-207ENST00000496363 SMLR1H3BR10 107 aa8.45□□□□□ -1.06
USF1-207ENST00000496363 CRPP02741 224 aa8.45□□□□□ -1.06
USF1-207ENST00000496363 RAB4BP61018 213 aa8.45□□□□□ -1.06
USF1-207ENST00000496363 PRR27Q6MZM9 219 aa8.45□□□□□ -1.06
USF1-207ENST00000496363 TCEAL7Q9BRU2 100 aa8.45□□□□□ -1.06
USF1-207ENST00000496363 UBR4Q5T4S7 5183 aa8.45□□□□□ -1.06
USF1-207ENST00000496363 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
USF1-207ENST00000496363 IGLV2-8P01709 118 aa8.44□□□□□ -1.06
USF1-207ENST00000496363 HLA-DQA1P01909 254 aa8.44□□□□□ -1.06
USF1-207ENST00000496363 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
USF1-207ENST00000496363 SSTP61278 116 aa8.44□□□□□ -1.06
USF1-207ENST00000496363 C14orf177Q52M58 125 aa8.44□□□□□ -1.06
USF1-207ENST00000496363 CHCHD5Q9BSY4 110 aa8.44□□□□□ -1.06
USF1-207ENST00000496363 BATF3Q9NR55 127 aa8.44□□□□□ -1.06
USF1-207ENST00000496363 CLPSL2Q6UWE3 100 aa8.43□□□□□ -1.06
USF1-207ENST00000496363 NTM-AS1Q6ZSK4 140 aa8.43□□□□□ -1.06
USF1-207ENST00000496363 FAM213BQ8TBF2 198 aa8.43□□□□□ -1.06
USF1-207ENST00000496363 SFT2D1Q8WV19 159 aa8.43□□□□□ -1.06
USF1-207ENST00000496363 ZNF471Q9BX82 626 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms