RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PPP1R2P9O14990 202 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 TRGC1P0CF51 173 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 P0DMU3 169 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 FAM231AP0DMU4 169 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 FAM231CP0DMU5 169 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 RHOHQ15669 191 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 CNFNQ9BYD5 112 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 CSMD3Q7Z407 3707 aa11.95□□□□□ -0.5
HDAC6-235ENST00000495515 A0A087WWL8 130 aa11.94□□□□□ -0.5
HDAC6-235ENST00000495515 CRYGDP07320 174 aa11.94□□□□□ -0.5
HDAC6-235ENST00000495515 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
HDAC6-235ENST00000495515 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
HDAC6-235ENST00000495515 HIGD1CA8MV81 97 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 MT-ND4LP03901 98 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 GYPEP15421 78 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 NTF3P20783 257 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 TWIST1Q15672 202 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 UFSP1Q6NVU6 142 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 SMIM15Q7Z3B0 74 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 C14orf178Q8N769 122 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-235ENST00000495515 SLC25A29Q8N8R3 303 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 LINC00476Q8WZB0 136 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 PGLYRP4Q96LB8 373 aa11.93□□□□□ -0.5
HDAC6-235ENST00000495515 LCE6AA0A183 80 aa11.92□□□□□ -0.5
HDAC6-235ENST00000495515 LY6G6CO95867 125 aa11.92□□□□□ -0.5
HDAC6-235ENST00000495515 SH2D6Q7Z4S9 175 aa11.92□□□□□ -0.5
HDAC6-235ENST00000495515 UBE2DNLQ8IWF7 75 aa11.92□□□□□ -0.5
HDAC6-235ENST00000495515 ANAPC16Q96DE5 110 aa11.92□□□□□ -0.5
HDAC6-235ENST00000495515 NAT8BQ9UHF3 227 aa11.92□□□□□ -0.5
HDAC6-235ENST00000495515 TENM2Q9NT68 2774 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 STARD9Q9P2P6 4700 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 A0A1B0GUT8 65 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 K7EQD1 137 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 SRIP30626 198 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 CCL18P55774 89 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 RAB4BP61018 213 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 ZNF56Q15929 161 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 MSRB1Q9NZV6 116 aa11.91□□□□□ -0.5
HDAC6-235ENST00000495515 A0A096LPF7 62 aa11.9□□□□□ -0.5
HDAC6-235ENST00000495515 F5H697 171 aa11.9□□□□□ -0.5
HDAC6-235ENST00000495515 ADCYAP1P18509 176 aa11.9□□□□□ -0.5
HDAC6-235ENST00000495515 RNF212Q495C1 297 aa11.9□□□□□ -0.5
HDAC6-235ENST00000495515 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
HDAC6-235ENST00000495515 RIGQ13278 110 aa11.89□□□□□ -0.51
HDAC6-235ENST00000495515 NEGR1Q7Z3B1 354 aa11.89□□□□□ -0.51
HDAC6-235ENST00000495515 DPH3P1Q9H4G8 78 aa11.89□□□□□ -0.51
HDAC6-235ENST00000495515 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
HDAC6-235ENST00000495515 MGPP08493 103 aa11.88□□□□□ -0.51
HDAC6-235ENST00000495515 EVI2AP22794 236 aa11.88□□□□□ -0.51
HDAC6-235ENST00000495515 FAM3BP58499 235 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-235ENST00000495515 Q6ZSN1 163 aa11.88□□□□□ -0.51
HDAC6-235ENST00000495515 NUP35Q8NFH5 326 aa11.88□□□□□ -0.51
HDAC6-235ENST00000495515 KIF25-AS1Q9Y6Z4 181 aa11.88□□□□□ -0.51
HDAC6-235ENST00000495515 DYNC2H1Q8NCM8 4307 aaKnown RBP11.87□□□□□ -0.51
HDAC6-235ENST00000495515 H7C1H1 209 aa11.87□□□□□ -0.51
HDAC6-235ENST00000495515 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
HDAC6-235ENST00000495515 C10orf91Q5T1B1 145 aa11.87□□□□□ -0.51
HDAC6-235ENST00000495515 RYR2Q92736 4967 aa11.87□□□□□ -0.51
HDAC6-235ENST00000495515 LOC100131303A0A0U1RQF7 123 aa11.86□□□□□ -0.51
HDAC6-235ENST00000495515 A0A1B0GW15 77 aa11.86□□□□□ -0.51
HDAC6-235ENST00000495515 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
HDAC6-235ENST00000495515 LINC00315P59091 139 aa11.85□□□□□ -0.51
HDAC6-235ENST00000495515 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
HDAC6-235ENST00000495515 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
HDAC6-235ENST00000495515 CTDSP1Q9GZU7 261 aa11.85□□□□□ -0.51
HDAC6-235ENST00000495515 NACAE9PAV3 2078 aa11.84□□□□□ -0.51
HDAC6-235ENST00000495515 GAGE12JA6NER3 117 aa11.84□□□□□ -0.51
HDAC6-235ENST00000495515 S100A8P05109 93 aa11.84□□□□□ -0.51
HDAC6-235ENST00000495515 GAGE1Q13065 139 aa11.84□□□□□ -0.51
HDAC6-235ENST00000495515 GAGE4Q13068 117 aa11.84□□□□□ -0.51
HDAC6-235ENST00000495515 GAGE5Q13069 117 aa11.84□□□□□ -0.51
HDAC6-235ENST00000495515 ESRGQ1W209 222 aa11.84□□□□□ -0.51
HDAC6-235ENST00000495515 GAGE13Q4V321 117 aa11.84□□□□□ -0.51
HDAC6-235ENST00000495515 LYPD5Q6UWN5 251 aa11.83□□□□□ -0.52
HDAC6-235ENST00000495515 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-235ENST00000495515 ATP6V0E2Q8NHE4 81 aa11.83□□□□□ -0.52
HDAC6-235ENST00000495515 TMEM191AQ9H0A3 160 aa11.83□□□□□ -0.52
HDAC6-235ENST00000495515 LINC00588Q9Y4M8 146 aa11.83□□□□□ -0.52
HDAC6-235ENST00000495515 TRBV7-3A0A075B6L6 115 aa11.82□□□□□ -0.52
HDAC6-235ENST00000495515 TIRAPP58753 221 aa11.82□□□□□ -0.52
HDAC6-235ENST00000495515 RHEBQ15382 184 aa11.82□□□□□ -0.52
HDAC6-235ENST00000495515 SUMO4Q6EEV6 95 aa11.82□□□□□ -0.52
HDAC6-235ENST00000495515 ZNRF2Q8NHG8 242 aa11.82□□□□□ -0.52
HDAC6-235ENST00000495515 IMMP2LQ96T52 175 aa11.82□□□□□ -0.52
HDAC6-235ENST00000495515 MRPS16Q9Y3D3 137 aaKnown RBP11.82□□□□□ -0.52
HDAC6-235ENST00000495515 SACSQ9NZJ4 4579 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 M0QY20 66 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 KCNIP4Q6PIL6 250 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 ATP5L2Q7Z4Y8 100 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 SVBPQ8N300 66 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 CLRN3Q8NCR9 226 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 FRZBQ92765 325 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 UPK3BQ9BT76 320 aa11.81□□□□□ -0.52
HDAC6-235ENST00000495515 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
HDAC6-235ENST00000495515 APOC3P02656 99 aa11.8□□□□□ -0.52
HDAC6-235ENST00000495515 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms