RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TXNDC17Q9BRA2 123 aa5.49□□□□□ -1.53
RIF1-211ENST00000494333 ARL2-SNX15V9GYD0 113 aa5.49□□□□□ -1.53
RIF1-211ENST00000494333 DNAH6Q9C0G6 4158 aa5.49□□□□□ -1.53
RIF1-211ENST00000494333 IGHV3-73A0A0B4J1V6 119 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 IGKV3D-20A0A0C4DH25 116 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 MAP1LC3B2A6NCE7 125 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 PGPEP1LA6NFU8 196 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 FAM74A7A6NL05 159 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 FABP5P3A8MUU1 101 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 RS1O15537 224 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 RNASE3P12724 160 aaKnown RBP5.48□□□□□ -1.53
RIF1-211ENST00000494333 GATA1P15976 413 aaPredicted RBP5.48□□□□□ -1.53
RIF1-211ENST00000494333 S100A4P26447 101 aaKnown RBP5.48□□□□□ -1.53
RIF1-211ENST00000494333 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
RIF1-211ENST00000494333 CFAP126Q5VTH2 177 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 DPPA3Q6W0C5 159 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 WFDC10BQ8IUB3 73 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 NHLRC2Q8NBF2 726 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 HIST1H2BAQ96A08 127 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 C9orf85Q96MD7 179 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 NKX6-2Q9C056 277 aaPredicted RBP5.48□□□□□ -1.53
RIF1-211ENST00000494333 MAP1LC3BQ9GZQ8 125 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 LY96Q9Y6Y9 160 aa5.48□□□□□ -1.53
RIF1-211ENST00000494333 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 DNAH2Q9P225 4427 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
RIF1-211ENST00000494333 PEX7O00628 323 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 CIDEAO60543 219 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 EVI2AP22794 236 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 FHITP49789 147 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 ZNF506Q5JVG8 444 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 CST9LP1Q5W188 147 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
RIF1-211ENST00000494333 SH2D6Q7Z4S9 175 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 KCNRGQ8N5I3 272 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 SLC25A29Q8N8R3 303 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 STOML3Q8TAV4 291 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 PRADC1Q9BSG0 188 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 FAT2Q9NYQ8 4349 aa5.47□□□□□ -1.53
RIF1-211ENST00000494333 TRBV6-4A0A1B0GX49 114 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 ASIPP42127 132 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 CRIP1P50238 77 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 UBE2G1P62253 170 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 ZNF345Q14585 488 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 RHOHQ15669 191 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 NFE4Q86UQ8 179 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 OR11H4Q8NGC9 324 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 SFT2D1Q8WV19 159 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 PTH2Q96A98 100 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 ZFP30Q9Y2G7 519 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 HECTD4Q9Y4D8 3996 aa5.46□□□□□ -1.54
RIF1-211ENST00000494333 IGHV3-38A0A0C4DH36 116 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 A0A0D9SG52 128 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 A0A1B0GUV1 79 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 HMSDA8MTL9 139 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 B4DEV8 164 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 K7EP13 123 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 M0R036 132 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 CDK2AP2O75956 126 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 SEC11BP0C7V7 166 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 DNAH10OSP0CZ25 163 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 MGST1P10620 155 aaKnown RBP5.45□□□□□ -1.54
RIF1-211ENST00000494333 LGALSLQ3ZCW2 172 aaPredicted RBP5.45□□□□□ -1.54
RIF1-211ENST00000494333 Q86TA4 180 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 FAM213BQ8TBF2 198 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 ZC2HC1AQ96GY0 325 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 FMC1Q96HJ9 113 aa5.45□□□□□ -1.54
RIF1-211ENST00000494333 ZNF471Q9BX82 626 aaPredicted RBP5.45□□□□□ -1.54
RIF1-211ENST00000494333 HERC2O95714 4834 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 TRAV8-6A0A0B4J262 113 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 A0A1B0GV50 99 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 KANTRA0A1W2PQU2 76 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 GRIFINA4D1Z8 144 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 A8MWV9 139 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 UMAD1C9J7I0 102 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 KRBOX1C9JBD0 128 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 SH2D1AO60880 128 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 CRYGDP07320 174 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 ARMS2P0C7Q2 107 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 ERVFC1-1P60608 527 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 OR10J3Q5JRS4 329 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 ZFP2Q6ZN57 461 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 COX8CQ7Z4L0 72 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 ATP6V0E2Q8NHE4 81 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 MBD3L1Q8WWY6 194 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 PARLQ9H300 379 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 JPT2Q9H910 190 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 IL36BQ9NZH7 164 aa5.44□□□□□ -1.54
RIF1-211ENST00000494333 A0A087WTM6 91 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 TMSB15BA0A087X1C1 80 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 H3BVH4 76 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 BCL2L11O43521 198 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 LTAP01374 205 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 FUSP35637 526 aaKnown RBP eCLIP5.43□□□□□ -1.54
RIF1-211ENST00000494333 AKR1C3P42330 323 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 EIF5AP63241 154 aaKnown RBP5.43□□□□□ -1.54
RIF1-211ENST00000494333 GAGE5Q13069 117 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 ZNF674Q2M3X9 581 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 DNLZQ5SXM8 178 aa5.43□□□□□ -1.54
RIF1-211ENST00000494333 FAM162BQ5T6X4 162 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms