RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 OR10J3Q5JRS4 329 aa9.97□□□□□ -0.81
ATG4B-224ENST00000494132 Q6ZRN7 208 aaPredicted RBP9.97□□□□□ -0.81
ATG4B-224ENST00000494132 SH2D6Q7Z4S9 175 aa9.97□□□□□ -0.81
ATG4B-224ENST00000494132 SFRP2Q96HF1 295 aa9.97□□□□□ -0.81
ATG4B-224ENST00000494132 TRBV20OR9-2A0A075B6H5 130 aa9.96□□□□□ -0.82
ATG4B-224ENST00000494132 RHODO00212 210 aa9.96□□□□□ -0.82
ATG4B-224ENST00000494132 CRYGDP07320 174 aa9.96□□□□□ -0.82
ATG4B-224ENST00000494132 DNAH10OSP0CZ25 163 aa9.96□□□□□ -0.82
ATG4B-224ENST00000494132 EVI2AP22794 236 aa9.96□□□□□ -0.82
ATG4B-224ENST00000494132 GNG4P50150 75 aa9.96□□□□□ -0.82
ATG4B-224ENST00000494132 VAX2Q9UIW0 290 aa9.96□□□□□ -0.82
ATG4B-224ENST00000494132 IGHV3-38A0A0C4DH36 116 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 PDE6DO43924 150 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 IGHV3-30P01768 117 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 LINC00694P0DN24 101 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 IGHV3-30-3P0DP02 117 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 IGHV3-30-5P0DP03 117 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 MED14OSP0DP75 135 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 SPATA12Q7Z6I5 190 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 Q8N3U1 123 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 GTSF1LQ9H1H1 148 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 HERC2O95714 4834 aa9.95□□□□□ -0.82
ATG4B-224ENST00000494132 TRAV9-2A0A087WT02 112 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 TRAV8-6A0A0B4J262 113 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 RBFOX3A6NFN3 312 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 C16orf90A8MZG2 172 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 SNAI2O43623 268 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 FUSP35637 526 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATG4B-224ENST00000494132 TIRAPP58753 221 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 KRTAP10-2P60368 255 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 LELP1Q5T871 98 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 OR2D3Q8NGH3 330 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 TPPP3Q9BW30 176 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 MSRB1Q9NZV6 116 aa9.94□□□□□ -0.82
ATG4B-224ENST00000494132 CXCL1P09341 107 aa9.93□□□□□ -0.82
ATG4B-224ENST00000494132 ZNF56Q15929 161 aa9.93□□□□□ -0.82
ATG4B-224ENST00000494132 SPANXN1Q5VSR9 72 aa9.93□□□□□ -0.82
ATG4B-224ENST00000494132 DAZAP1Q96EP5 407 aaKnown RBP9.93□□□□□ -0.82
ATG4B-224ENST00000494132 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
ATG4B-224ENST00000494132 C19orf71A6NCJ1 209 aa9.92□□□□□ -0.82
ATG4B-224ENST00000494132 BLOC1S1P78537 153 aa9.92□□□□□ -0.82
ATG4B-224ENST00000494132 P01737 135 aa9.91□□□□□ -0.82
ATG4B-224ENST00000494132 OR5AL1P0C617 328 aa9.91□□□□□ -0.82
ATG4B-224ENST00000494132 BTF3P20290 206 aaKnown RBP9.91□□□□□ -0.82
ATG4B-224ENST00000494132 CEBPGP53567 150 aa9.91□□□□□ -0.82
ATG4B-224ENST00000494132 LINC01556Q5JQF7 62 aa9.91□□□□□ -0.82
ATG4B-224ENST00000494132 Q9HAA7 133 aa9.91□□□□□ -0.82
ATG4B-224ENST00000494132 DNAH5Q8TE73 4624 aa9.9□□□□□ -0.82
ATG4B-224ENST00000494132 IGLC6P0CF74 106 aa9.9□□□□□ -0.82
ATG4B-224ENST00000494132 TAGLN2P37802 199 aaKnown RBP9.9□□□□□ -0.82
ATG4B-224ENST00000494132 TOR2AQ5JU69 321 aa9.9□□□□□ -0.82
ATG4B-224ENST00000494132 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
ATG4B-224ENST00000494132 FER1L6-AS1Q8NA97 138 aa9.9□□□□□ -0.82
ATG4B-224ENST00000494132 LRP1BQ9NZR2 4599 aa9.9□□□□□ -0.83
ATG4B-224ENST00000494132 F5H697 171 aa9.89□□□□□ -0.83
ATG4B-224ENST00000494132 K7EN84 100 aa9.89□□□□□ -0.83
ATG4B-224ENST00000494132 ERVFC1-1P60608 527 aa9.89□□□□□ -0.83
ATG4B-224ENST00000494132 NFE4Q86UQ8 179 aa9.89□□□□□ -0.83
ATG4B-224ENST00000494132 NUDT10Q8NFP7 164 aa9.89□□□□□ -0.83
ATG4B-224ENST00000494132 OCC1Q8TAD7 63 aa9.89□□□□□ -0.83
ATG4B-224ENST00000494132 SMIM12Q96EX1 92 aa9.89□□□□□ -0.83
ATG4B-224ENST00000494132 NUDT11Q96G61 164 aa9.89□□□□□ -0.83
ATG4B-224ENST00000494132 RNASE7Q9H1E1 156 aaKnown RBP9.89□□□□□ -0.83
ATG4B-224ENST00000494132 MGPP08493 103 aa9.88□□□□□ -0.83
ATG4B-224ENST00000494132 RPS20P60866 119 aaKnown RBP9.88□□□□□ -0.83
ATG4B-224ENST00000494132 RAB4BP61018 213 aa9.88□□□□□ -0.83
ATG4B-224ENST00000494132 RPL36AP83881 106 aaKnown RBP9.88□□□□□ -0.83
ATG4B-224ENST00000494132 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
ATG4B-224ENST00000494132 LYPD6BQ8NI32 183 aa9.88□□□□□ -0.83
ATG4B-224ENST00000494132 RPL36ALQ969Q0 106 aaKnown RBP9.88□□□□□ -0.83
ATG4B-224ENST00000494132 AP1S3Q96PC3 154 aa9.88□□□□□ -0.83
ATG4B-224ENST00000494132 A0A087WTM6 91 aa9.87□□□□□ -0.83
ATG4B-224ENST00000494132 IBA57-AS1B1ANH7 110 aa9.87□□□□□ -0.83
ATG4B-224ENST00000494132 K7EP13 123 aa9.87□□□□□ -0.83
ATG4B-224ENST00000494132 SMIM17P0DL12 118 aa9.87□□□□□ -0.83
ATG4B-224ENST00000494132 UBE2D3P61077 147 aa9.87□□□□□ -0.83
ATG4B-224ENST00000494132 UBE2D2P62837 147 aa9.87□□□□□ -0.83
ATG4B-224ENST00000494132 LYZL1Q6UWQ5 148 aa9.87□□□□□ -0.83
ATG4B-224ENST00000494132 DAZ4Q86SG3 579 aaKnown RBP9.87□□□□□ -0.83
ATG4B-224ENST00000494132 DAZ3Q9NR90 486 aaKnown RBP9.87□□□□□ -0.83
ATG4B-224ENST00000494132 KIF25-AS1Q9Y6Z4 181 aa9.87□□□□□ -0.83
ATG4B-224ENST00000494132 TRBV7-3A0A075B6L6 115 aa9.86□□□□□ -0.83
ATG4B-224ENST00000494132 TRBV10-1A0A0K0K1A3 114 aa9.86□□□□□ -0.83
ATG4B-224ENST00000494132 EIF5A2Q9GZV4 153 aaKnown RBP9.86□□□□□ -0.83
ATG4B-224ENST00000494132 BIN3Q9NQY0 253 aa9.86□□□□□ -0.83
ATG4B-224ENST00000494132 RYR1P21817 5038 aa9.85□□□□□ -0.83
ATG4B-224ENST00000494132 XKRY2A2RUG3 117 aa9.85□□□□□ -0.83
ATG4B-224ENST00000494132 TMEM250H0YL14 139 aa9.85□□□□□ -0.83
ATG4B-224ENST00000494132 PSCAO43653 123 aa9.85□□□□□ -0.83
ATG4B-224ENST00000494132 A0A087WWC5 75 aa9.84□□□□□ -0.83
ATG4B-224ENST00000494132 EREGO14944 169 aa9.84□□□□□ -0.83
ATG4B-224ENST00000494132 CACNG7P62955 275 aa9.84□□□□□ -0.83
ATG4B-224ENST00000494132 OR10G8Q8NGN5 311 aa9.84□□□□□ -0.83
ATG4B-224ENST00000494132 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
ATG4B-224ENST00000494132 FAM210AQ96ND0 272 aa9.84□□□□□ -0.83
ATG4B-224ENST00000494132 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
ATG4B-224ENST00000494132 NTF3P20783 257 aa9.83□□□□□ -0.84
ATG4B-224ENST00000494132 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
ATG4B-224ENST00000494132 NIT1Q86X76 327 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms