RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 DKK4Q9UBT3 224 aa15.54■□□□□ 0.08
RNF40-203ENST00000493683 A0A1B0GX51 115 aa15.53■□□□□ 0.08
RNF40-203ENST00000493683 PCNX1Q96RV3 2341 aa15.53■□□□□ 0.08
RNF40-203ENST00000493683 TIRAPP58753 221 aa15.53■□□□□ 0.08
RNF40-203ENST00000493683 DOCK9Q9BZ29 2069 aa15.53■□□□□ 0.08
RNF40-203ENST00000493683 TAX1BP3O14907 124 aa15.53■□□□□ 0.08
RNF40-203ENST00000493683 WDR81Q562E7 1941 aa15.53■□□□□ 0.08
RNF40-203ENST00000493683 CCL18P55774 89 aa15.53■□□□□ 0.08
RNF40-203ENST00000493683 Q8N1Y9 231 aa15.53■□□□□ 0.08
RNF40-203ENST00000493683 IGHV4-61A0A0C4DH41 118 aa15.52■□□□□ 0.08
RNF40-203ENST00000493683 KIAA1671Q9BY89 1806 aa15.52■□□□□ 0.08
RNF40-203ENST00000493683 J3KT08 172 aa15.52■□□□□ 0.08
RNF40-203ENST00000493683 RS1O15537 224 aa15.52■□□□□ 0.08
RNF40-203ENST00000493683 SS18L2Q9UHA2 77 aa15.52■□□□□ 0.07
RNF40-203ENST00000493683 SPRNQ5BIV9 151 aa15.51■□□□□ 0.07
RNF40-203ENST00000493683 LGALS9O00182 355 aa15.51■□□□□ 0.07
RNF40-203ENST00000493683 IGLV1-47P01700 117 aa15.51■□□□□ 0.07
RNF40-203ENST00000493683 SPATA12Q7Z6I5 190 aa15.51■□□□□ 0.07
RNF40-203ENST00000493683 DEFB136Q30KP8 78 aa15.51■□□□□ 0.07
RNF40-203ENST00000493683 RITA1Q96K30 269 aa15.51■□□□□ 0.07
RNF40-203ENST00000493683 ODF1Q14990 250 aa15.5■□□□□ 0.07
RNF40-203ENST00000493683 FAM236AA0A1B0GUQ0 79 aa15.5■□□□□ 0.07
RNF40-203ENST00000493683 FAM236BA0A1B0GV22 79 aa15.5■□□□□ 0.07
RNF40-203ENST00000493683 IGHV4-38-2P0DP08 117 aa15.5■□□□□ 0.07
RNF40-203ENST00000493683 IGHV1-58A0A0C4DH39 117 aa15.5■□□□□ 0.07
RNF40-203ENST00000493683 C19orf71A6NCJ1 209 aa15.5■□□□□ 0.07
RNF40-203ENST00000493683 C2orf70A6NJV1 201 aa15.5■□□□□ 0.07
RNF40-203ENST00000493683 C10orf105Q8TEF2 133 aa15.5■□□□□ 0.07
RNF40-203ENST00000493683 TDRG1Q3Y452 100 aa15.49■□□□□ 0.07
RNF40-203ENST00000493683 Q9HAA7 133 aa15.49■□□□□ 0.07
RNF40-203ENST00000493683 WFDC2Q14508 124 aa15.49■□□□□ 0.07
RNF40-203ENST00000493683 CHKB-CPT1BH3BT56 60 aa15.48■□□□□ 0.07
RNF40-203ENST00000493683 TMEM256-PLSCR3K7ERE1 68 aa15.48■□□□□ 0.07
RNF40-203ENST00000493683 RPL39P62891 51 aaKnown RBP15.48■□□□□ 0.07
RNF40-203ENST00000493683 PRAC2D3DTV9 90 aa15.48■□□□□ 0.07
RNF40-203ENST00000493683 SPRY2O43597 315 aa15.48■□□□□ 0.07
RNF40-203ENST00000493683 TRBV10-1A0A0K0K1A3 114 aa15.47■□□□□ 0.07
RNF40-203ENST00000493683 BLCAPP62952 87 aa15.47■□□□□ 0.07
RNF40-203ENST00000493683 DAZAP2Q15038 168 aaPredicted RBP15.47■□□□□ 0.07
RNF40-203ENST00000493683 KMT2EQ8IZD2 1858 aa15.47■□□□□ 0.07
RNF40-203ENST00000493683 C11orf1Q9H5F2 150 aa15.47■□□□□ 0.07
RNF40-203ENST00000493683 HELZP42694 1942 aaKnown RBP15.47■□□□□ 0.07
RNF40-203ENST00000493683 MYCNOSP40205 109 aa15.46■□□□□ 0.07
RNF40-203ENST00000493683 C20orf203Q8NBC4 194 aa15.46■□□□□ 0.07
RNF40-203ENST00000493683 DIRC1Q969H9 104 aa15.46■□□□□ 0.07
RNF40-203ENST00000493683 HHLA3Q9XRX5 114 aa15.46■□□□□ 0.07
RNF40-203ENST00000493683 ODF3L1Q8IXM7 274 aa15.46■□□□□ 0.07
RNF40-203ENST00000493683 TMEM61Q8N0U2 210 aa15.46■□□□□ 0.07
RNF40-203ENST00000493683 IGKV3D-7A0A0C4DH55 119 aa15.46■□□□□ 0.07
RNF40-203ENST00000493683 GRNP28799 593 aaKnown RBP15.46■□□□□ 0.07
RNF40-203ENST00000493683 IGHV4OR15-8A0A075B7B6 117 aa15.46■□□□□ 0.06
RNF40-203ENST00000493683 A0A087WW49 117 aa15.46■□□□□ 0.06
RNF40-203ENST00000493683 IGLV2-14P01704 120 aa15.46■□□□□ 0.06
RNF40-203ENST00000493683 GTF3C1Q12789 2109 aa15.45■□□□□ 0.06
RNF40-203ENST00000493683 IGHV4-30-2A0A087WSY4 118 aa15.45■□□□□ 0.06
RNF40-203ENST00000493683 TM2D2Q9BX73 214 aa15.45■□□□□ 0.06
RNF40-203ENST00000493683 IGHV4-4A0A075B6R2 117 aa15.45■□□□□ 0.06
RNF40-203ENST00000493683 LECT2O14960 151 aa15.45■□□□□ 0.06
RNF40-203ENST00000493683 WFDC9Q8NEX5 89 aa15.45■□□□□ 0.06
RNF40-203ENST00000493683 G3V4G9 280 aa15.44■□□□□ 0.06
RNF40-203ENST00000493683 C4orf3Q8WVX3 66 aa15.44■□□□□ 0.06
RNF40-203ENST00000493683 EML6Q6ZMW3 1958 aa15.44■□□□□ 0.06
RNF40-203ENST00000493683 C5orf47Q569G3 176 aa15.44■□□□□ 0.06
RNF40-203ENST00000493683 MGAMO43451 1857 aa15.44■□□□□ 0.06
RNF40-203ENST00000493683 IGLV10-54A0A075B6I4 117 aa15.44■□□□□ 0.06
RNF40-203ENST00000493683 HIGD2BQ4VC39 106 aa15.43■□□□□ 0.06
RNF40-203ENST00000493683 MDFICQ9P1T7 246 aa15.43■□□□□ 0.06
RNF40-203ENST00000493683 SHANK1Q9Y566 2161 aa15.43■□□□□ 0.06
RNF40-203ENST00000493683 A0A1B0GXF2 115 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 RNASE8Q8TDE3 154 aaKnown RBP15.42■□□□□ 0.06
RNF40-203ENST00000493683 IGHV3-30P01768 117 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 IGHV3-33P01772 117 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 IGHV3-30-3P0DP02 117 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 IGHV3-30-5P0DP03 117 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 LINC00643Q86TS7 51 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 MED13LQ71F56 2210 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 SPAG11BQ08648 103 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 ODF3Q96PU9 254 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 TANC1Q9C0D5 1861 aa15.42■□□□□ 0.06
RNF40-203ENST00000493683 TMEM263Q8WUH6 116 aaKnown RBP15.41■□□□□ 0.06
RNF40-203ENST00000493683 Q8N7P7 452 aa15.41■□□□□ 0.06
RNF40-203ENST00000493683 ATRXP46100 2492 aa15.41■□□□□ 0.06
RNF40-203ENST00000493683 A0A0J9YX75 114 aa15.4■□□□□ 0.06
RNF40-203ENST00000493683 NDUFA11Q86Y39 141 aa15.4■□□□□ 0.06
RNF40-203ENST00000493683 MIAQ16674 131 aa15.4■□□□□ 0.06
RNF40-203ENST00000493683 P0C879 139 aa15.4■□□□□ 0.06
RNF40-203ENST00000493683 WT1P19544 449 aaPredicted RBP15.39■□□□□ 0.06
RNF40-203ENST00000493683 MIR7-3HGQ8N6C7 128 aa15.39■□□□□ 0.05
RNF40-203ENST00000493683 SPATA25Q9BR10 227 aa15.39■□□□□ 0.05
RNF40-203ENST00000493683 NCR3O14931 201 aa15.39■□□□□ 0.05
RNF40-203ENST00000493683 SIRPDQ9H106 197 aa15.39■□□□□ 0.05
RNF40-203ENST00000493683 IGHV4-28A0A0C4DH34 117 aa15.39■□□□□ 0.05
RNF40-203ENST00000493683 TTTY13Q9BZ97 58 aa15.39■□□□□ 0.05
RNF40-203ENST00000493683 DAND5Q8N907 189 aa15.39■□□□□ 0.05
RNF40-203ENST00000493683 FAM208BQ5VWN6 2430 aa15.38■□□□□ 0.05
RNF40-203ENST00000493683 INSL3P51460 131 aa15.38■□□□□ 0.05
RNF40-203ENST00000493683 FBXL19-AS1Q494R0 122 aa15.38■□□□□ 0.05
RNF40-203ENST00000493683 LINC00574Q9H8X3 128 aa15.38■□□□□ 0.05
RNF40-203ENST00000493683 CRYGBP07316 175 aa15.38■□□□□ 0.05
RNF40-203ENST00000493683 UBE2AP49459 152 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 313 ms