RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 TNFSF18Q9UNG2 199 aa11.37□□□□□ -0.59
COL9A1-210ENST00000493682 IFNA7P01567 189 aa11.36□□□□□ -0.59
COL9A1-210ENST00000493682 FAM74A4Q5TZK3 123 aa11.36□□□□□ -0.59
COL9A1-210ENST00000493682 Q86TA4 180 aa11.36□□□□□ -0.59
COL9A1-210ENST00000493682 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
COL9A1-210ENST00000493682 KRBOX1C9JBD0 128 aa11.35□□□□□ -0.59
COL9A1-210ENST00000493682 PEX7O00628 323 aa11.35□□□□□ -0.59
COL9A1-210ENST00000493682 ARMS2P0C7Q2 107 aa11.35□□□□□ -0.59
COL9A1-210ENST00000493682 CRIP1P50238 77 aa11.35□□□□□ -0.59
COL9A1-210ENST00000493682 DNLZQ5SXM8 178 aa11.35□□□□□ -0.59
COL9A1-210ENST00000493682 OR11H4Q8NGC9 324 aa11.35□□□□□ -0.59
COL9A1-210ENST00000493682 CIRBP-AS1Q8TBR5 109 aa11.35□□□□□ -0.59
COL9A1-210ENST00000493682 UBE2WQ96B02 151 aa11.35□□□□□ -0.59
COL9A1-210ENST00000493682 A0A087WWL8 130 aa11.34□□□□□ -0.59
COL9A1-210ENST00000493682 A0A087WX48 190 aa11.34□□□□□ -0.59
COL9A1-210ENST00000493682 GRIFINA4D1Z8 144 aa11.34□□□□□ -0.59
COL9A1-210ENST00000493682 M0R036 132 aa11.34□□□□□ -0.59
COL9A1-210ENST00000493682 UBE2G2P60604 165 aa11.34□□□□□ -0.59
COL9A1-210ENST00000493682 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
COL9A1-210ENST00000493682 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
COL9A1-210ENST00000493682 ALG5Q9Y673 324 aa11.34□□□□□ -0.59
COL9A1-210ENST00000493682 ELOBQ15370 118 aa11.33□□□□□ -0.6
COL9A1-210ENST00000493682 ZNF726P1Q15940 193 aa11.33□□□□□ -0.6
COL9A1-210ENST00000493682 ATRAIDQ6UW56 229 aa11.33□□□□□ -0.6
COL9A1-210ENST00000493682 SFRP2Q96HF1 295 aa11.33□□□□□ -0.6
COL9A1-210ENST00000493682 CHCHD7Q9BUK0 85 aa11.33□□□□□ -0.6
COL9A1-210ENST00000493682 SH2D1AO60880 128 aa11.32□□□□□ -0.6
COL9A1-210ENST00000493682 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
COL9A1-210ENST00000493682 A6NHS1 94 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 FAM74A7A6NL05 159 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 M0R381 172 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 OXTP01178 125 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 Q5BKY6 102 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 RPL7L1Q6DKI1 246 aaKnown RBP11.31□□□□□ -0.6
COL9A1-210ENST00000493682 COX8CQ7Z4L0 72 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 ZFP30Q9Y2G7 519 aa11.31□□□□□ -0.6
COL9A1-210ENST00000493682 LRP1Q07954 4544 aaKnown RBP11.3□□□□□ -0.6
COL9A1-210ENST00000493682 TRBV10-1A0A0K0K1A3 114 aa11.3□□□□□ -0.6
COL9A1-210ENST00000493682 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
COL9A1-210ENST00000493682 IGLV2-8P01709 118 aa11.3□□□□□ -0.6
COL9A1-210ENST00000493682 TPT1P13693 172 aaKnown RBP11.3□□□□□ -0.6
COL9A1-210ENST00000493682 UBE2D3P61077 147 aa11.3□□□□□ -0.6
COL9A1-210ENST00000493682 UBE2D2P62837 147 aa11.3□□□□□ -0.6
COL9A1-210ENST00000493682 RPL36AP83881 106 aaKnown RBP11.3□□□□□ -0.6
COL9A1-210ENST00000493682 KCNIP4Q6PIL6 250 aa11.3□□□□□ -0.6
COL9A1-210ENST00000493682 RPL36ALQ969Q0 106 aaKnown RBP11.3□□□□□ -0.6
COL9A1-210ENST00000493682 NKX6-2Q9C056 277 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-210ENST00000493682 TRBV7-3A0A075B6L6 115 aa11.29□□□□□ -0.6
COL9A1-210ENST00000493682 TMSB15BA0A087X1C1 80 aa11.29□□□□□ -0.6
COL9A1-210ENST00000493682 Q0VG73 95 aa11.29□□□□□ -0.6
COL9A1-210ENST00000493682 HMCN2Q8NDA2 5059 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 BORCS7-ASMTA0A0B4J1R7 106 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 TMEM262E9PQX1 116 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 ZNF674Q2M3X9 581 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 C14orf177Q52M58 125 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 ENHOQ6UWT2 76 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 ZFP82Q8N141 532 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 C1orf43Q9BWL3 253 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 MED28Q9H204 178 aa11.28□□□□□ -0.6
COL9A1-210ENST00000493682 INO80EQ8NBZ0 244 aaPredicted RBP11.27□□□□□ -0.61
COL9A1-210ENST00000493682 FMC1Q96HJ9 113 aa11.27□□□□□ -0.61
COL9A1-210ENST00000493682 TRBV6-8A0A0A6YYG3 113 aa11.26□□□□□ -0.61
COL9A1-210ENST00000493682 UBE2G1P62253 170 aa11.26□□□□□ -0.61
COL9A1-210ENST00000493682 C15orf54Q8N8G6 183 aa11.26□□□□□ -0.61
COL9A1-210ENST00000493682 OR10G8Q8NGN5 311 aa11.26□□□□□ -0.61
COL9A1-210ENST00000493682 TRBV6-1A0A0K0K1D8 114 aa11.25□□□□□ -0.61
COL9A1-210ENST00000493682 LTAP01374 205 aa11.25□□□□□ -0.61
COL9A1-210ENST00000493682 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
COL9A1-210ENST00000493682 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
COL9A1-210ENST00000493682 CRPP02741 224 aa11.24□□□□□ -0.61
COL9A1-210ENST00000493682 GIPP09681 153 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-210ENST00000493682 RAB4BP61018 213 aa11.24□□□□□ -0.61
COL9A1-210ENST00000493682 MPV17L2Q567V2 206 aa11.24□□□□□ -0.61
COL9A1-210ENST00000493682 FAT3Q8TDW7 4589 aa11.23□□□□□ -0.61
COL9A1-210ENST00000493682 FXYD6-FXYD2A0A087WZ82 144 aa11.23□□□□□ -0.61
COL9A1-210ENST00000493682 MAP1LC3B2A6NCE7 125 aa11.23□□□□□ -0.61
COL9A1-210ENST00000493682 ANGP03950 147 aaKnown RBP11.23□□□□□ -0.61
COL9A1-210ENST00000493682 RPL37AP61513 92 aaKnown RBP11.23□□□□□ -0.61
COL9A1-210ENST00000493682 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
COL9A1-210ENST00000493682 NEXN-AS1Q8NBZ9 246 aa11.23□□□□□ -0.61
COL9A1-210ENST00000493682 MAP1LC3BQ9GZQ8 125 aa11.23□□□□□ -0.61
COL9A1-210ENST00000493682 PLA2G2DQ9UNK4 145 aa11.23□□□□□ -0.61
COL9A1-210ENST00000493682 HLA-DQA1P01909 254 aa11.22□□□□□ -0.61
COL9A1-210ENST00000493682 FHITP49789 147 aa11.22□□□□□ -0.61
COL9A1-210ENST00000493682 ZNF56Q15929 161 aa11.22□□□□□ -0.61
COL9A1-210ENST00000493682 TCEAL7Q9BRU2 100 aa11.22□□□□□ -0.61
COL9A1-210ENST00000493682 PTTG1O95997 202 aa11.21□□□□□ -0.61
COL9A1-210ENST00000493682 PRSS1P07477 247 aa11.21□□□□□ -0.61
COL9A1-210ENST00000493682 LORP23490 312 aaPredicted RBP11.21□□□□□ -0.61
COL9A1-210ENST00000493682 HNRNPA3P51991 378 aaKnown RBP11.21□□□□□ -0.61
COL9A1-210ENST00000493682 CST9LP1Q5W188 147 aa11.21□□□□□ -0.61
COL9A1-210ENST00000493682 OR10AG1Q8NH19 301 aa11.21□□□□□ -0.61
COL9A1-210ENST00000493682 CHCHD5Q9BSY4 110 aa11.21□□□□□ -0.61
COL9A1-210ENST00000493682 AKR1C3P42330 323 aa11.2□□□□□ -0.62
COL9A1-210ENST00000493682 RPL19P84098 196 aaKnown RBP11.2□□□□□ -0.62
COL9A1-210ENST00000493682 MIAQ16674 131 aa11.2□□□□□ -0.62
COL9A1-210ENST00000493682 DGAT2L7PQ6IED9 249 aa11.2□□□□□ -0.62
COL9A1-210ENST00000493682 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms