RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 PIK3CD-AS1Q5SR53 167 aa9.75□□□□□ -0.85
ATG4B-223ENST00000493618 DNLZQ5SXM8 178 aa9.75□□□□□ -0.85
ATG4B-223ENST00000493618 STOML3Q8TAV4 291 aa9.75□□□□□ -0.85
ATG4B-223ENST00000493618 FRZBQ92765 325 aa9.75□□□□□ -0.85
ATG4B-223ENST00000493618 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
ATG4B-223ENST00000493618 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
ATG4B-223ENST00000493618 LECT2O14960 151 aa9.74□□□□□ -0.85
ATG4B-223ENST00000493618 LTAP01374 205 aa9.74□□□□□ -0.85
ATG4B-223ENST00000493618 TPT1P13693 172 aaKnown RBP9.74□□□□□ -0.85
ATG4B-223ENST00000493618 COX8CQ7Z4L0 72 aa9.74□□□□□ -0.85
ATG4B-223ENST00000493618 FAM213BQ8TBF2 198 aa9.74□□□□□ -0.85
ATG4B-223ENST00000493618 SFRP2Q96HF1 295 aa9.74□□□□□ -0.85
ATG4B-223ENST00000493618 TRBV6-1A0A0K0K1D8 114 aa9.73□□□□□ -0.85
ATG4B-223ENST00000493618 RHODO00212 210 aa9.73□□□□□ -0.85
ATG4B-223ENST00000493618 RPL19P84098 196 aaKnown RBP9.73□□□□□ -0.85
ATG4B-223ENST00000493618 LAGE3Q14657 143 aa9.73□□□□□ -0.85
ATG4B-223ENST00000493618 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
ATG4B-223ENST00000493618 KCNRGQ8N5I3 272 aa9.73□□□□□ -0.85
ATG4B-223ENST00000493618 NTN5Q8WTR8 489 aaPredicted RBP9.73□□□□□ -0.85
ATG4B-223ENST00000493618 SFT2D1Q8WV19 159 aa9.73□□□□□ -0.85
ATG4B-223ENST00000493618 DNAJC30Q96LL9 226 aa9.73□□□□□ -0.85
ATG4B-223ENST00000493618 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
ATG4B-223ENST00000493618 TM2D2Q9BX73 214 aa9.72□□□□□ -0.85
ATG4B-223ENST00000493618 ZFP82Q8N141 532 aa9.71□□□□□ -0.86
ATG4B-223ENST00000493618 TCEAL7Q9BRU2 100 aa9.71□□□□□ -0.86
ATG4B-223ENST00000493618 ZNF471Q9BX82 626 aaPredicted RBP9.71□□□□□ -0.86
ATG4B-223ENST00000493618 FAM30AQ9NZY2 134 aa9.71□□□□□ -0.86
ATG4B-223ENST00000493618 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.7□□□□□ -0.86
ATG4B-223ENST00000493618 A0A087WWC5 75 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 TRAV8-3A0A0A6YYJ7 113 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 MUC21A0A0G2JKD1 596 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 MUC21A0A140T8X8 626 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 ZNF345Q14585 488 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 MBD3L1Q8WWY6 194 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 BAALCQ8WXS3 180 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 TMEM70Q9BUB7 260 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 URGCP-MRPS24S4R325 110 aa9.7□□□□□ -0.86
ATG4B-223ENST00000493618 KANTRA0A1W2PQU2 76 aa9.69□□□□□ -0.86
ATG4B-223ENST00000493618 BCL2L11O43521 198 aa9.69□□□□□ -0.86
ATG4B-223ENST00000493618 PFDN1O60925 122 aa9.69□□□□□ -0.86
ATG4B-223ENST00000493618 SEC11BP0C7V7 166 aa9.69□□□□□ -0.86
ATG4B-223ENST00000493618 SSTP61278 116 aa9.69□□□□□ -0.86
ATG4B-223ENST00000493618 PRR27Q6MZM9 219 aa9.69□□□□□ -0.86
ATG4B-223ENST00000493618 NIT1Q86X76 327 aa9.69□□□□□ -0.86
ATG4B-223ENST00000493618 OR10AG1Q8NH19 301 aa9.69□□□□□ -0.86
ATG4B-223ENST00000493618 TOR2AQ5JU69 321 aa9.68□□□□□ -0.86
ATG4B-223ENST00000493618 BAGE2Q86Y30 109 aa9.68□□□□□ -0.86
ATG4B-223ENST00000493618 KLK12Q9UKR0 248 aa9.68□□□□□ -0.86
ATG4B-223ENST00000493618 HERC1Q15751 4861 aa9.68□□□□□ -0.86
ATG4B-223ENST00000493618 IGKV2D-24A0A075B6R9 120 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 A0A0D9SG52 128 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 HMSDA8MTL9 139 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 UMAD1C9J7I0 102 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 H2AFB1P0C5Y9 115 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 UBE2D3P61077 147 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 UBE2D2P62837 147 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 RPL36AP83881 106 aaKnown RBP9.67□□□□□ -0.86
ATG4B-223ENST00000493618 ZNF56Q15929 161 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 LINC01620Q4KN68 170 aa9.67□□□□□ -0.86
ATG4B-223ENST00000493618 RPL36ALQ969Q0 106 aaKnown RBP9.67□□□□□ -0.86
ATG4B-223ENST00000493618 S100A9P06702 114 aaKnown RBP9.66□□□□□ -0.86
ATG4B-223ENST00000493618 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
ATG4B-223ENST00000493618 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
ATG4B-223ENST00000493618 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
ATG4B-223ENST00000493618 TRBV7-3A0A075B6L6 115 aa9.65□□□□□ -0.86
ATG4B-223ENST00000493618 A0A087WX48 190 aa9.65□□□□□ -0.86
ATG4B-223ENST00000493618 TRBV10-1A0A0K0K1A3 114 aa9.65□□□□□ -0.86
ATG4B-223ENST00000493618 RAB4BP61018 213 aa9.65□□□□□ -0.86
ATG4B-223ENST00000493618 CCL20P78556 96 aa9.65□□□□□ -0.86
ATG4B-223ENST00000493618 TMUB2Q71RG4 321 aa9.65□□□□□ -0.86
ATG4B-223ENST00000493618 NEXN-AS1Q8NBZ9 246 aa9.65□□□□□ -0.86
ATG4B-223ENST00000493618 RMI2Q96E14 147 aa9.65□□□□□ -0.86
ATG4B-223ENST00000493618 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
ATG4B-223ENST00000493618 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
ATG4B-223ENST00000493618 KCNIP4Q6PIL6 250 aa9.64□□□□□ -0.87
ATG4B-223ENST00000493618 DERL1Q9BUN8 251 aa9.64□□□□□ -0.87
ATG4B-223ENST00000493618 GNG13Q9P2W3 67 aa9.64□□□□□ -0.87
ATG4B-223ENST00000493618 F5H697 171 aa9.63□□□□□ -0.87
ATG4B-223ENST00000493618 SNAI2O43623 268 aa9.63□□□□□ -0.87
ATG4B-223ENST00000493618 CXCL1P09341 107 aa9.63□□□□□ -0.87
ATG4B-223ENST00000493618 RPL35P42766 123 aaKnown RBP9.63□□□□□ -0.87
ATG4B-223ENST00000493618 OR10G8Q8NGN5 311 aa9.63□□□□□ -0.87
ATG4B-223ENST00000493618 COX11Q9Y6N1 276 aa9.63□□□□□ -0.87
ATG4B-223ENST00000493618 MYCBP2O75592 4640 aa9.63□□□□□ -0.87
ATG4B-223ENST00000493618 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
ATG4B-223ENST00000493618 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
ATG4B-223ENST00000493618 GZMBP10144 247 aa9.62□□□□□ -0.87
ATG4B-223ENST00000493618 EIF5AP63241 154 aaKnown RBP9.62□□□□□ -0.87
ATG4B-223ENST00000493618 C15orf54Q8N8G6 183 aa9.62□□□□□ -0.87
ATG4B-223ENST00000493618 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-223ENST00000493618 TRBV6-8A0A0A6YYG3 113 aa9.61□□□□□ -0.87
ATG4B-223ENST00000493618 C1QBP02746 253 aa9.61□□□□□ -0.87
ATG4B-223ENST00000493618 OR5AL1P0C617 328 aa9.61□□□□□ -0.87
ATG4B-223ENST00000493618 ELOBQ15370 118 aa9.61□□□□□ -0.87
ATG4B-223ENST00000493618 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
ATG4B-223ENST00000493618 CHCHD7Q9BUK0 85 aa9.61□□□□□ -0.87
ATG4B-223ENST00000493618 TPPP3Q9BW30 176 aa9.61□□□□□ -0.87
ATG4B-223ENST00000493618 MANBALQ9NQG1 85 aa9.61□□□□□ -0.87
ATG4B-223ENST00000493618 RAB19A4D1S5 217 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms