RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 OR10AG1Q8NH19 301 aa6.43□□□□□ -1.38
SGIP1-213ENST00000493564 DAZAP1Q96EP5 407 aaKnown RBP6.43□□□□□ -1.38
SGIP1-213ENST00000493564 SFRP2Q96HF1 295 aa6.43□□□□□ -1.38
SGIP1-213ENST00000493564 TPPP3Q9BW30 176 aa6.43□□□□□ -1.38
SGIP1-213ENST00000493564 DNAH11Q96DT5 4516 aa6.43□□□□□ -1.38
SGIP1-213ENST00000493564 TRBV20OR9-2A0A075B6H5 130 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 A0A1W2PPQ1 181 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 RBFOX3A6NFN3 312 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 CEBPGP53567 150 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 OR10J3Q5JRS4 329 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 PIK3CD-AS1Q5SR53 167 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 SH2D6Q7Z4S9 175 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 ATP6V0E2Q8NHE4 81 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 LY96Q9Y6Y9 160 aa6.42□□□□□ -1.38
SGIP1-213ENST00000493564 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 IGHV3-30P01768 117 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 IGHV3-33P01772 117 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 IGHV3-30-3P0DP02 117 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 IGHV3-30-5P0DP03 117 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 SPANXN1Q5VSR9 72 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 OR2D3Q8NGH3 330 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 OCC1Q8TAD7 63 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 GTSF1LQ9H1H1 148 aa6.41□□□□□ -1.38
SGIP1-213ENST00000493564 TRAV9-2A0A087WT02 112 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 TRAV8-6A0A0B4J262 113 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 C19orf71A6NCJ1 209 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 RHODO00212 210 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 SNAI2O43623 268 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 P01737 135 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 EVI2AP22794 236 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 NUDT10Q8NFP7 164 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 LYPD6BQ8NI32 183 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 NUDT11Q96G61 164 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 SSBP4Q9BWG4 385 aaPredicted RBP6.4□□□□□ -1.38
SGIP1-213ENST00000493564 MSRB1Q9NZV6 116 aa6.4□□□□□ -1.38
SGIP1-213ENST00000493564 DYNC1H1Q14204 4646 aaKnown RBP6.39□□□□□ -1.39
SGIP1-213ENST00000493564 F5H697 171 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 K7EN84 100 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 CXCL1P09341 107 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 OR5AL1P0C617 328 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 DNAH10OSP0CZ25 163 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 FUSP35637 526 aaKnown RBP eCLIP6.39□□□□□ -1.39
SGIP1-213ENST00000493564 TAGLN2P37802 199 aaKnown RBP6.39□□□□□ -1.39
SGIP1-213ENST00000493564 TIRAPP58753 221 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 ZNF56Q15929 161 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 TOR2AQ5JU69 321 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 LELP1Q5T871 98 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 Q8N3U1 123 aa6.39□□□□□ -1.39
SGIP1-213ENST00000493564 EIF5A2Q9GZV4 153 aaKnown RBP6.39□□□□□ -1.39
SGIP1-213ENST00000493564 RNASE7Q9H1E1 156 aaKnown RBP6.39□□□□□ -1.39
SGIP1-213ENST00000493564 LINC00694P0DN24 101 aa6.38□□□□□ -1.39
SGIP1-213ENST00000493564 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
SGIP1-213ENST00000493564 LYZL1Q6UWQ5 148 aa6.38□□□□□ -1.39
SGIP1-213ENST00000493564 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
SGIP1-213ENST00000493564 FER1L6-AS1Q8NA97 138 aa6.38□□□□□ -1.39
SGIP1-213ENST00000493564 J3QL48 77 aa6.37□□□□□ -1.39
SGIP1-213ENST00000493564 IGLC6P0CF74 106 aa6.37□□□□□ -1.39
SGIP1-213ENST00000493564 SMIM17P0DL12 118 aa6.37□□□□□ -1.39
SGIP1-213ENST00000493564 RAB4BP61018 213 aa6.37□□□□□ -1.39
SGIP1-213ENST00000493564 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
SGIP1-213ENST00000493564 SMIM12Q96EX1 92 aa6.37□□□□□ -1.39
SGIP1-213ENST00000493564 Q9HAA7 133 aa6.37□□□□□ -1.39
SGIP1-213ENST00000493564 BIN3Q9NQY0 253 aa6.37□□□□□ -1.39
SGIP1-213ENST00000493564 KIF25-AS1Q9Y6Z4 181 aa6.37□□□□□ -1.39
SGIP1-213ENST00000493564 TRBV7-3A0A075B6L6 115 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 XKRY2A2RUG3 117 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 C16orf90A8MZG2 172 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 TMEM250H0YL14 139 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 MGPP08493 103 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 BTF3P20290 206 aaKnown RBP6.36□□□□□ -1.39
SGIP1-213ENST00000493564 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 RPL36AP83881 106 aaKnown RBP6.36□□□□□ -1.39
SGIP1-213ENST00000493564 LINC01556Q5JQF7 62 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 NEXN-AS1Q8NBZ9 246 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 RPL36ALQ969Q0 106 aaKnown RBP6.36□□□□□ -1.39
SGIP1-213ENST00000493564 FAM210AQ96ND0 272 aa6.36□□□□□ -1.39
SGIP1-213ENST00000493564 TRBV10-1A0A0K0K1A3 114 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 GATCO43716 136 aaKnown RBP6.35□□□□□ -1.39
SGIP1-213ENST00000493564 SRP19P09132 144 aaKnown RBP6.35□□□□□ -1.39
SGIP1-213ENST00000493564 NTF3P20783 257 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 UBE2D3P61077 147 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 UBE2D2P62837 147 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 CACNG7P62955 275 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 TEX261Q6UWH6 196 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 DAZ4Q86SG3 579 aaKnown RBP6.35□□□□□ -1.39
SGIP1-213ENST00000493564 NFE4Q86UQ8 179 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 C10orf126Q8N4M7 172 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
SGIP1-213ENST00000493564 RPP21Q9H633 154 aaKnown RBP6.35□□□□□ -1.39
SGIP1-213ENST00000493564 DAZ3Q9NR90 486 aaKnown RBP6.35□□□□□ -1.39
SGIP1-213ENST00000493564 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
SGIP1-213ENST00000493564 A0A087WWC5 75 aa6.34□□□□□ -1.39
SGIP1-213ENST00000493564 ZNF727A8MUV8 499 aa6.34□□□□□ -1.39
SGIP1-213ENST00000493564 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.39
SGIP1-213ENST00000493564 C9JQL5 133 aa6.34□□□□□ -1.39
SGIP1-213ENST00000493564 F2Z2F3 143 aa6.34□□□□□ -1.39
SGIP1-213ENST00000493564 ERVFC1-1P60608 527 aa6.34□□□□□ -1.39
SGIP1-213ENST00000493564 SRSF3P84103 164 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms