RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ZNF56Q15929 161 aa5.7□□□□□ -1.5
TM4SF1-204ENST00000493348 FAM231DQ6ZW35 169 aa5.7□□□□□ -1.5
TM4SF1-204ENST00000493348 POM121L12Q8N7R1 296 aa5.7□□□□□ -1.5
TM4SF1-204ENST00000493348 A0A087WWL8 130 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 MUC21A0A0G2JKD1 596 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 MUC21A0A140T8X8 626 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 TRBV6-4A0A1B0GX49 114 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 K7EN84 100 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 K7EQD1 137 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 SNAI2O43623 268 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 GZMBP10144 247 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 GATA1P15976 413 aaPredicted RBP5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 FAM3BP58499 235 aaPredicted RBP5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 TWIST1Q15672 202 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 NEGR1Q7Z3B1 354 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 LINC01551Q86U37 167 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 OR10AG1Q8NH19 301 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 SFRP2Q96HF1 295 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 SCRT2Q9NQ03 307 aa5.69□□□□□ -1.5
TM4SF1-204ENST00000493348 A0A096LPF7 62 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 H7C1H1 209 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 MGPP08493 103 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 CT83Q5H943 113 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 UQCC3Q6UW78 93 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 SLC25A29Q8N8R3 303 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 OR10G8Q8NGN5 311 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 VSIG2Q96IQ7 327 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 SSBP4Q9BWG4 385 aaPredicted RBP5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 OSTCQ9NRP0 149 aa5.68□□□□□ -1.5
TM4SF1-204ENST00000493348 RAB4BP61018 213 aa5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 RPL23P62829 140 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 RPL36AP83881 106 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 SRSF3P84103 164 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 PNRC1Q12796 327 aaPredicted RBP5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 WDR73Q6P4I2 378 aa5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 C14orf178Q8N769 122 aaPredicted RBP5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 RPL36ALQ969Q0 106 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 ISOC2Q96AB3 205 aa5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 PGLYRP4Q96LB8 373 aa5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 JPT2Q9H910 190 aa5.67□□□□□ -1.5
TM4SF1-204ENST00000493348 TRAV8-6A0A0B4J262 113 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 FAM231BA6NCW3 169 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 GAGE12JA6NER3 117 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 C9JQL5 133 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 F8W036 122 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 PPP1R2P9O14990 202 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 IGLC6P0CF74 106 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 NTF3P20783 257 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 IFITM2Q01629 132 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 GAGE1Q13065 139 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 GAGE4Q13068 117 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 GAGE5Q13069 117 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 GAGE13Q4V321 117 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 KCNIP4Q6PIL6 250 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 COMMD7Q86VX2 200 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 ATP6V0E2Q8NHE4 81 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 TSKUQ8WUA8 353 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 SAMD10Q9BYL1 202 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 GFRA4Q9GZZ7 299 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 DPH3P1Q9H4G8 78 aa5.66□□□□□ -1.5
TM4SF1-204ENST00000493348 DNAH1Q9P2D7 4330 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 IGLV2-18A0A075B6J9 118 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 TRAV9-2A0A087WT02 112 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 TRBV10-1A0A0K0K1A3 114 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 A0A1B0GUT8 65 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 HIGD1CA8MV81 97 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 NXPH4O95158 308 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 MT-ND4LP03901 98 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 CTRLP40313 264 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 RIGQ13278 110 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 ESRGQ1W209 222 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 TTC32Q5I0X7 151 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 OR10J3Q5JRS4 329 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 NAT8BQ9UHF3 227 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 MRPS16Q9Y3D3 137 aaKnown RBP5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 LINC00588Q9Y4M8 146 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 TNFRSF18Q9Y5U5 241 aa5.65□□□□□ -1.5
TM4SF1-204ENST00000493348 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.51
TM4SF1-204ENST00000493348 SACSQ9NZJ4 4579 aa5.65□□□□□ -1.51
TM4SF1-204ENST00000493348 LOC100131303A0A0U1RQF7 123 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 M0R2N4 97 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 SIVA1O15304 175 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 S100A8P05109 93 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 CRYGDP07320 174 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 LYPD5Q6UWN5 251 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 ZNRF2Q8NHG8 242 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 ANAPC16Q96DE5 110 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 GTSF1LQ9H1H1 148 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 Q9H8V8 135 aa5.64□□□□□ -1.51
TM4SF1-204ENST00000493348 VPS13DQ5THJ4 4388 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 TRBV7-3A0A075B6L6 115 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 A0A087WWC5 75 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 EVI2AP22794 236 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 NDUFA5Q16718 116 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 UFSP1Q6NVU6 142 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 ZNF575Q86XF7 245 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 GTSF1Q8WW33 167 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms