RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 SAMD10Q9BYL1 202 aa12.15□□□□□ -0.46
LIME1-208ENST00000493265 DEFB131BA0A096LNP1 70 aa12.14□□□□□ -0.47
LIME1-208ENST00000493265 TRAV10A0A0B4J240 114 aa12.14□□□□□ -0.47
LIME1-208ENST00000493265 TRAV4A0A0B4J268 109 aa12.14□□□□□ -0.47
LIME1-208ENST00000493265 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
LIME1-208ENST00000493265 A8MWV9 139 aa12.14□□□□□ -0.47
LIME1-208ENST00000493265 ATRAIDQ6UW56 229 aa12.14□□□□□ -0.47
LIME1-208ENST00000493265 PHLDA1Q8WV24 401 aaPredicted RBP12.14□□□□□ -0.47
LIME1-208ENST00000493265 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
LIME1-208ENST00000493265 HOXA5P20719 270 aa12.13□□□□□ -0.47
LIME1-208ENST00000493265 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
LIME1-208ENST00000493265 C14orf178Q8N769 122 aaPredicted RBP12.13□□□□□ -0.47
LIME1-208ENST00000493265 AP1S3Q96PC3 154 aa12.13□□□□□ -0.47
LIME1-208ENST00000493265 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
LIME1-208ENST00000493265 A0A087WWC5 75 aa12.12□□□□□ -0.47
LIME1-208ENST00000493265 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
LIME1-208ENST00000493265 RIGQ13278 110 aa12.12□□□□□ -0.47
LIME1-208ENST00000493265 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
LIME1-208ENST00000493265 WDR73Q6P4I2 378 aa12.12□□□□□ -0.47
LIME1-208ENST00000493265 NDUFAF3Q9BU61 184 aa12.12□□□□□ -0.47
LIME1-208ENST00000493265 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
LIME1-208ENST00000493265 MGPP08493 103 aa12.11□□□□□ -0.47
LIME1-208ENST00000493265 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
LIME1-208ENST00000493265 EVI2AP22794 236 aa12.11□□□□□ -0.47
LIME1-208ENST00000493265 KCNIP4Q6PIL6 250 aa12.11□□□□□ -0.47
LIME1-208ENST00000493265 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
LIME1-208ENST00000493265 CNFNQ9BYD5 112 aa12.11□□□□□ -0.47
LIME1-208ENST00000493265 PLECQ15149 4684 aaKnown RBP12.11□□□□□ -0.47
LIME1-208ENST00000493265 A0A0J9YY99 117 aa12.1□□□□□ -0.47
LIME1-208ENST00000493265 F5H697 171 aa12.1□□□□□ -0.47
LIME1-208ENST00000493265 CRYGDP07320 174 aa12.1□□□□□ -0.47
LIME1-208ENST00000493265 S100PP25815 95 aa12.1□□□□□ -0.47
LIME1-208ENST00000493265 CAMPP49913 170 aa12.1□□□□□ -0.47
LIME1-208ENST00000493265 FHL2Q14192 279 aa12.1□□□□□ -0.47
LIME1-208ENST00000493265 ZNF56Q15929 161 aa12.1□□□□□ -0.47
LIME1-208ENST00000493265 SMIM15Q7Z3B0 74 aa12.1□□□□□ -0.47
LIME1-208ENST00000493265 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
LIME1-208ENST00000493265 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
LIME1-208ENST00000493265 TMEM242Q9NWH2 141 aa12.09□□□□□ -0.47
LIME1-208ENST00000493265 TRAV26-1A0A087WT03 109 aa12.08□□□□□ -0.48
LIME1-208ENST00000493265 IGLL5B9A064 214 aa12.08□□□□□ -0.48
LIME1-208ENST00000493265 RHODO00212 210 aa12.08□□□□□ -0.48
LIME1-208ENST00000493265 TMEM88Q6PEY1 159 aa12.08□□□□□ -0.48
LIME1-208ENST00000493265 Q6ZSN1 163 aa12.08□□□□□ -0.48
LIME1-208ENST00000493265 HHLA3Q9XRX5 114 aa12.08□□□□□ -0.48
LIME1-208ENST00000493265 ALMS1Q8TCU4 4167 aa12.07□□□□□ -0.48
LIME1-208ENST00000493265 UFSP1Q6NVU6 142 aa12.07□□□□□ -0.48
LIME1-208ENST00000493265 CEMP1Q6PRD7 247 aaPredicted RBP12.07□□□□□ -0.48
LIME1-208ENST00000493265 ZFP2Q6ZN57 461 aa12.07□□□□□ -0.48
LIME1-208ENST00000493265 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
LIME1-208ENST00000493265 DPH3P1Q9H4G8 78 aa12.07□□□□□ -0.48
LIME1-208ENST00000493265 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
LIME1-208ENST00000493265 NACAE9PAV3 2078 aa12.06□□□□□ -0.48
LIME1-208ENST00000493265 PAX4O43316 350 aa12.06□□□□□ -0.48
LIME1-208ENST00000493265 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
LIME1-208ENST00000493265 HBBP68871 147 aa12.06□□□□□ -0.48
LIME1-208ENST00000493265 NUPR2A6NF83 97 aa12.05□□□□□ -0.48
LIME1-208ENST00000493265 CIDEAO60543 219 aa12.05□□□□□ -0.48
LIME1-208ENST00000493265 RAB4BP61018 213 aa12.05□□□□□ -0.48
LIME1-208ENST00000493265 CBLN2Q8IUK8 224 aa12.05□□□□□ -0.48
LIME1-208ENST00000493265 PRO0255Q9UI72 69 aa12.05□□□□□ -0.48
LIME1-208ENST00000493265 A0A1B0GW15 77 aa12.04□□□□□ -0.48
LIME1-208ENST00000493265 A0A1B0GXF2 115 aa12.04□□□□□ -0.48
LIME1-208ENST00000493265 CRYBA4P53673 196 aa12.04□□□□□ -0.48
LIME1-208ENST00000493265 LINC00315P59091 139 aa12.04□□□□□ -0.48
LIME1-208ENST00000493265 ATP5L2Q7Z4Y8 100 aa12.04□□□□□ -0.48
LIME1-208ENST00000493265 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
LIME1-208ENST00000493265 KLK5Q9Y337 293 aaPredicted RBP12.04□□□□□ -0.48
LIME1-208ENST00000493265 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 NUDT3O95989 172 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 S100A8P05109 93 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 P0DMU3 169 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 SLAQ13239 276 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 AMN1Q8IY45 258 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 VSIG2Q96IQ7 327 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 TMEM191AQ9H0A3 160 aa12.03□□□□□ -0.48
LIME1-208ENST00000493265 TRAV9-1A0A075B6T8 112 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 TGIF2-C20orf24A0A0A6YYL0 155 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 K7EQD1 137 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 SCO1O75880 301 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 GYPEP15421 78 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 S100A1P23297 94 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 SMCO4Q9NRQ5 59 aa12.02□□□□□ -0.49
LIME1-208ENST00000493265 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
LIME1-208ENST00000493265 ELOBQ15370 118 aa12.01□□□□□ -0.49
LIME1-208ENST00000493265 RHOHQ15669 191 aa12.01□□□□□ -0.49
LIME1-208ENST00000493265 Q9UF83 564 aa12.01□□□□□ -0.49
LIME1-208ENST00000493265 A0A096LPF7 62 aa12□□□□□ -0.49
LIME1-208ENST00000493265 RAB4AP20338 218 aa12□□□□□ -0.49
LIME1-208ENST00000493265 RNF185Q96GF1 192 aa12□□□□□ -0.49
LIME1-208ENST00000493265 GAGE12JA6NER3 117 aa11.99□□□□□ -0.49
LIME1-208ENST00000493265 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
LIME1-208ENST00000493265 GAGE1Q13065 139 aa11.99□□□□□ -0.49
LIME1-208ENST00000493265 GAGE4Q13068 117 aa11.99□□□□□ -0.49
LIME1-208ENST00000493265 GAGE5Q13069 117 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms