RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 A8MWV9 139 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 IGLL5B9A064 214 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 SCO1O75880 301 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 NXPH4O95158 308 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 TRGC1P0CF51 173 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 SMIM17P0DL12 118 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 CAMPP49913 170 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 CBLN2Q8IUK8 224 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 OR4C5Q8NGB2 326 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 AP1S3Q96PC3 154 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 MUC4Q99102 2169 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 CNFNQ9BYD5 112 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 JPT2Q9H910 190 aa9.52□□□□□ -0.89
MSH6-208ENST00000493177 TENM2Q9NT68 2774 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 TRAV9-1A0A075B6T8 112 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 A0A087WWL8 130 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 RS1O15537 224 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 HBBP68871 147 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 C12orf74Q32Q52 190 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 FAM74A4Q5TZK3 123 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 Q6ZTC4 211 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 LINC00612Q8N6U2 182 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 C14orf178Q8N769 122 aaPredicted RBP9.51□□□□□ -0.89
MSH6-208ENST00000493177 NDUFAF3Q9BU61 184 aa9.51□□□□□ -0.89
MSH6-208ENST00000493177 IGHV3-73A0A0B4J1V6 119 aa9.5□□□□□ -0.89
MSH6-208ENST00000493177 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
MSH6-208ENST00000493177 A0A1B0GW15 77 aa9.5□□□□□ -0.89
MSH6-208ENST00000493177 S100A8P05109 93 aa9.5□□□□□ -0.89
MSH6-208ENST00000493177 HTN3P15516 51 aa9.5□□□□□ -0.89
MSH6-208ENST00000493177 RAB4BP61018 213 aa9.5□□□□□ -0.89
MSH6-208ENST00000493177 CFAP126Q5VTH2 177 aa9.5□□□□□ -0.89
MSH6-208ENST00000493177 LYSTQ99698 3801 aa9.5□□□□□ -0.89
MSH6-208ENST00000493177 RYR2Q92736 4967 aa9.49□□□□□ -0.89
MSH6-208ENST00000493177 TGIF2-C20orf24A0A0A6YYL0 155 aa9.49□□□□□ -0.89
MSH6-208ENST00000493177 MGPP08493 103 aa9.49□□□□□ -0.89
MSH6-208ENST00000493177 EVI2AP22794 236 aa9.49□□□□□ -0.89
MSH6-208ENST00000493177 TCTAP57738 103 aa9.49□□□□□ -0.89
MSH6-208ENST00000493177 ELOBQ15370 118 aa9.49□□□□□ -0.89
MSH6-208ENST00000493177 ZNF479Q96JC4 524 aa9.49□□□□□ -0.89
MSH6-208ENST00000493177 SAMD10Q9BYL1 202 aa9.49□□□□□ -0.89
MSH6-208ENST00000493177 TRGV4A0A0C4DH28 118 aa9.48□□□□□ -0.89
MSH6-208ENST00000493177 A0A1B0GXF2 115 aa9.48□□□□□ -0.89
MSH6-208ENST00000493177 ATP5G1P05496 136 aa9.48□□□□□ -0.89
MSH6-208ENST00000493177 ZNF56Q15929 161 aa9.48□□□□□ -0.89
MSH6-208ENST00000493177 POM121L12Q8N7R1 296 aa9.48□□□□□ -0.89
MSH6-208ENST00000493177 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
MSH6-208ENST00000493177 ALMS1Q8TCU4 4167 aa9.48□□□□□ -0.89
MSH6-208ENST00000493177 DEFB131BA0A096LNP1 70 aa9.47□□□□□ -0.89
MSH6-208ENST00000493177 F5H697 171 aa9.47□□□□□ -0.89
MSH6-208ENST00000493177 RHODO00212 210 aa9.47□□□□□ -0.89
MSH6-208ENST00000493177 CRYGDP07320 174 aa9.47□□□□□ -0.89
MSH6-208ENST00000493177 LGALS9CQ6DKI2 356 aa9.47□□□□□ -0.89
MSH6-208ENST00000493177 C18orf15Q96N68 181 aa9.47□□□□□ -0.89
MSH6-208ENST00000493177 TMEM191AQ9H0A3 160 aa9.47□□□□□ -0.89
MSH6-208ENST00000493177 SACSQ9NZJ4 4579 aa9.46□□□□□ -0.89
MSH6-208ENST00000493177 F5H768 121 aa9.46□□□□□ -0.9
MSH6-208ENST00000493177 ZFP2Q6ZN57 461 aa9.46□□□□□ -0.9
MSH6-208ENST00000493177 FAM210BQ96KR6 192 aa9.46□□□□□ -0.9
MSH6-208ENST00000493177 TRBV24-1A0A075B6N3 115 aa9.45□□□□□ -0.9
MSH6-208ENST00000493177 CIDEAO60543 219 aa9.45□□□□□ -0.9
MSH6-208ENST00000493177 RASL11AQ6T310 242 aa9.45□□□□□ -0.9
MSH6-208ENST00000493177 AMN1Q8IY45 258 aa9.45□□□□□ -0.9
MSH6-208ENST00000493177 YPEL4Q96NS1 127 aa9.45□□□□□ -0.9
MSH6-208ENST00000493177 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
MSH6-208ENST00000493177 HOXA5P20719 270 aa9.44□□□□□ -0.9
MSH6-208ENST00000493177 FHL2Q14192 279 aa9.44□□□□□ -0.9
MSH6-208ENST00000493177 COX19Q49B96 90 aa9.44□□□□□ -0.9
MSH6-208ENST00000493177 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
MSH6-208ENST00000493177 APLNQ9ULZ1 77 aa9.44□□□□□ -0.9
MSH6-208ENST00000493177 HYDINQ4G0P3 5121 aa9.44□□□□□ -0.9
MSH6-208ENST00000493177 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
MSH6-208ENST00000493177 TMEM136Q6ZRR5 245 aa9.43□□□□□ -0.9
MSH6-208ENST00000493177 GATD1Q8NB37 220 aa9.43□□□□□ -0.9
MSH6-208ENST00000493177 FRZBQ92765 325 aa9.43□□□□□ -0.9
MSH6-208ENST00000493177 TRAV26-2A0A0B4J265 109 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 A0A0J9YY99 117 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 GATA1P15976 413 aaPredicted RBP9.42□□□□□ -0.9
MSH6-208ENST00000493177 RAB4AP20338 218 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 LINC00315P59091 139 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 SLAQ13239 276 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 Q6ZSN1 163 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 RNF185Q96GF1 192 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 GNB1LQ9BYB4 327 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 TRAPPC1Q9Y5R8 145 aa9.42□□□□□ -0.9
MSH6-208ENST00000493177 COLCA2A8K830 154 aa9.41□□□□□ -0.9
MSH6-208ENST00000493177 K7EQD1 137 aa9.41□□□□□ -0.9
MSH6-208ENST00000493177 PAX4O43316 350 aa9.41□□□□□ -0.9
MSH6-208ENST00000493177 APCSP02743 223 aa9.41□□□□□ -0.9
MSH6-208ENST00000493177 MT-ND6P03923 174 aa9.41□□□□□ -0.9
MSH6-208ENST00000493177 MRPL51Q4U2R6 128 aaKnown RBP9.41□□□□□ -0.9
MSH6-208ENST00000493177 UBE2DNLQ8IWF7 75 aa9.41□□□□□ -0.9
MSH6-208ENST00000493177 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.41□□□□□ -0.9
MSH6-208ENST00000493177 PRADC1Q9BSG0 188 aa9.41□□□□□ -0.9
MSH6-208ENST00000493177 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
MSH6-208ENST00000493177 PRO0255Q9UI72 69 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 538.9 ms