RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 GTSCR1Q86UQ5 136 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 OR8A1Q8NGG7 326 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 IMMP2LQ96T52 175 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 AGPAT4-IT1Q9H0P7 198 aa6.9□□□□□ -1.3
CSTF1-206ENST00000493039 TRAV8-1A0A0A6YYK1 113 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 GOLT1AQ6ZVE7 132 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 IL17DQ8TAD2 202 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 SCO2A0A1W2PP80 73 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 A8MTW9 85 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 K7EIL1 84 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 HLA-DRB4P13762 266 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 AMTNQ6UX39 209 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 OR5A1Q8NGJ0 315 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 HLA-DRB4X5D2U9 266 aa6.89□□□□□ -1.31
CSTF1-206ENST00000493039 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 C7orf71A4D174 169 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 GIG44P09565 113 aaPredicted RBP6.88□□□□□ -1.31
CSTF1-206ENST00000493039 TVP23CQ96ET8 276 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
CSTF1-206ENST00000493039 KLF12Q9Y4X4 402 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 DNAH9Q9NYC9 4486 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 PEX7O00628 323 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 IGKV3-20P01619 116 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
CSTF1-206ENST00000493039 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 CMC4P56277 68 aaPredicted RBP6.88□□□□□ -1.31
CSTF1-206ENST00000493039 KIR3DS1Q14943 382 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 LINC00322Q6ZN03 302 aaPredicted RBP6.88□□□□□ -1.31
CSTF1-206ENST00000493039 C9orf47Q6ZRZ4 202 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 TRPT1Q86TN4 253 aaKnown RBP6.88□□□□□ -1.31
CSTF1-206ENST00000493039 CMTM2Q8TAZ6 248 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 C11orf52Q96A22 123 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 TM2D2Q9BX73 214 aa6.88□□□□□ -1.31
CSTF1-206ENST00000493039 EIF5A2Q9GZV4 153 aaKnown RBP6.88□□□□□ -1.31
CSTF1-206ENST00000493039 RBAKDNA6NC62 111 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 K7EP34 96 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 OXTP01178 125 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 CSN1S1P47710 185 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 Q8TAT8 98 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 FAM19A4Q96LR4 140 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 TXNDC17Q9BRA2 123 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 SPANXCQ9NY87 97 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 TP53TG1Q9Y2A0 90 aa6.87□□□□□ -1.31
CSTF1-206ENST00000493039 TRBV20OR9-2A0A075B6H5 130 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 SRP19P09132 144 aaKnown RBP6.86□□□□□ -1.31
CSTF1-206ENST00000493039 EBLN2Q6P2I7 272 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 CYB561D1Q8N8Q1 229 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 FBN3Q75N90 2809 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 OR10J6PQ8NGY7 276 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 ZNF492Q9P255 531 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 COL7A1Q02388 2944 aa6.86□□□□□ -1.31
CSTF1-206ENST00000493039 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
CSTF1-206ENST00000493039 TRBV24-1A0A075B6N3 115 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 SPATA45Q537H7 98 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 RASL11AQ6T310 242 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 Q6ZQT7 251 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 TMEM75Q8N9X5 138 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 PKIGQ9Y2B9 76 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 TENM3Q9P273 2699 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 TMEM250H0YL14 139 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 CRXO43186 299 aaPredicted RBP6.85□□□□□ -1.31
CSTF1-206ENST00000493039 ZNF138P52744 262 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 PRR9Q5T870 116 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 ZFAND2AQ8N6M9 145 aa6.85□□□□□ -1.31
CSTF1-206ENST00000493039 RNASE7Q9H1E1 156 aaKnown RBP6.85□□□□□ -1.31
CSTF1-206ENST00000493039 A0A087WWL8 130 aa6.84□□□□□ -1.31
CSTF1-206ENST00000493039 DUSP14O95147 198 aaKnown RBP6.84□□□□□ -1.31
CSTF1-206ENST00000493039 FXYD7P58549 80 aa6.84□□□□□ -1.31
CSTF1-206ENST00000493039 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
CSTF1-206ENST00000493039 IGF2BP2-AS1Q96M15 143 aa6.84□□□□□ -1.31
CSTF1-206ENST00000493039 SAMD10Q9BYL1 202 aa6.84□□□□□ -1.31
CSTF1-206ENST00000493039 SMDT1Q9H4I9 107 aa6.84□□□□□ -1.31
CSTF1-206ENST00000493039 LTAP01374 205 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 IGLV2-8P01709 118 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 FRMD6-AS1P0C7T7 363 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 SPINK13Q1W4C9 94 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 PRNTQ86SH4 94 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 Q86TA4 180 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 C8orf49Q96NF6 230 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 PRADC1Q9BSG0 188 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 MLST8Q9BVC4 326 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 PARLQ9H300 379 aa6.84□□□□□ -1.32
CSTF1-206ENST00000493039 TRAV12-2A0A075B6T6 113 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 TRBV6-1A0A0K0K1D8 114 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 KLLNB2CW77 178 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 RBMY1A1P0DJD3 496 aaKnown RBP6.83□□□□□ -1.32
CSTF1-206ENST00000493039 RBMY1CP0DJD4 496 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 CRISP2P16562 243 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 RBMY1FQ15415 496 aaKnown RBP6.83□□□□□ -1.32
CSTF1-206ENST00000493039 GATD1Q8NB37 220 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 CSNK1G2-AS1Q8NCQ2 148 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 FMC1Q96HJ9 113 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 ODF3Q96PU9 254 aa6.83□□□□□ -1.32
CSTF1-206ENST00000493039 CRIP1P50238 77 aa6.82□□□□□ -1.32
CSTF1-206ENST00000493039 ZNF80P51504 273 aaPredicted RBP6.82□□□□□ -1.32
CSTF1-206ENST00000493039 XCL2Q9UBD3 114 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms