RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 HERVK_113P63121 156 aa16.17■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 MAPKAPK5-AS1Q8N8E1 139 aa16.16■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 ZNRF2Q8NHG8 242 aa16.16■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 TCTEX1D4Q5JR98 221 aa16.16■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 DNAJC30Q96LL9 226 aa16.16■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 PLXNB1O43157 2135 aa16.16■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 GNLYP22749 145 aa16.15■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 ICOSQ9Y6W8 199 aa16.15■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 GATA3P23771 443 aa16.15■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 C11orf44Q8N8P7 122 aa16.15■□□□□ 0.18
CHKB-CPT1B-203ENST00000492556 C5orf56Q8N8D9 126 aa16.14■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 XCL2Q9UBD3 114 aa16.14■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 FAM208BQ5VWN6 2430 aa16.14■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 HTN3P15516 51 aa16.14■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 NEXN-AS1Q8NBZ9 246 aa16.14■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 TTC28Q96AY4 2481 aa16.14■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 SOCS3O14543 225 aa16.13■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 TCL1BO95988 128 aa16.13■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 LINC01356Q8N9X3 169 aa16.13■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 ACYP1P07311 99 aa16.13■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 Q6ZUT4 128 aa16.12■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 AJUBAQ96IF1 538 aa16.12■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 EXPH5Q8NEV8 1989 aa16.12■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 WDR87Q6ZQQ6 2873 aa16.12■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 TRAV13-2A0A0B4J235 113 aa16.12■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.11■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 IGKV2-29A2NJV5 120 aaPredicted RBP16.11■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 ODF3BA8MYP8 253 aa16.11■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 DNAH12Q6ZR08 3092 aa16.11■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 DEFB1P60022 68 aa16.11■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 TRBV10-2A0A0K0K1G8 114 aa16.11■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 UFSP1Q6NVU6 142 aa16.1■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 Q9H8V8 135 aa16.1■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 JPT2Q9H910 190 aa16.1■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 ZFP36P26651 326 aaKnown RBP16.1■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 PTPRQQ9UMZ3 2332 aa16.1■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 CCDC140Q96MF4 163 aa16.1■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 LY6LH3BQJ8 138 aa16.09■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 LINC01619G3V211 115 aa16.09■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 SMAD5-AS1Q9Y6J3 95 aa16.09■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 TMEM243Q9BU79 118 aa16.09■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 TECTAO75443 2155 aa16.08■□□□□ 0.17
CHKB-CPT1B-203ENST00000492556 MT-ATP8P03928 68 aa16.08■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 LAMTOR3Q9UHA4 124 aa16.08■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 BAALC-AS2P0C853 105 aa16.07■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 SIRPDQ9H106 197 aa16.07■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 Q8N1Y9 231 aa16.07■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 NAV3Q8IVL0 2385 aa16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 ACACBO00763 2458 aa16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 PFN2P35080 140 aa16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 SS18Q15532 418 aa16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 ANKHD1Q8IWZ3 2542 aaKnown RBP16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 H3BT86 120 aa16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 ELANEP08246 267 aa16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 RPL35AP18077 110 aaKnown RBP16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 UNQ9165/PRO28630Q6UXU0 137 aa16.06■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 C20orf203Q8NBC4 194 aa16.05■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 TANC2Q9HCD6 1990 aa16.05■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 UTRNP46939 3433 aa16.05■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 FSTL3O95633 263 aa16.04■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 BLCAPP62952 87 aa16.04■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 SLC25A29Q8N8R3 303 aa16.04■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 K7EMT4 169 aa16.04■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 RNF183Q96D59 192 aa16.03■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 ZFAND3Q9H8U3 227 aa16.03■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 OPRPNQ99935 248 aaPredicted RBP16.03■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 SMIM20Q8N5G0 67 aa16.02■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 NRACQ8N912 160 aa16.02■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 A0A0B4J2C4 111 aa16.02■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 A0A0J9YY99 117 aa16.02■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 HERV-K104P63124 156 aa16.02■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 SPATA25Q9BR10 227 aa16.02■□□□□ 0.16
CHKB-CPT1B-203ENST00000492556 HOXD3P31249 432 aaPredicted RBP16.01■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 U3KQE9 123 aa16.01■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 IGHV3-30-3P0DP02 117 aa16■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 GAS8-AS1O95177 125 aa16■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 TRBV12-3P01733 135 aa16■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 CNFNQ9BYD5 112 aa16■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 IGHV1-58A0A0C4DH39 117 aa16■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 CFHR3Q02985 330 aa16■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 TRACP01848 142 aa16■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 HHLA3Q9XRX5 114 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 IGHV4-38-2P0DP08 117 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 EBI3Q14213 229 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 FBXL19-AS1Q494R0 122 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 MDFICQ9P1T7 246 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 CACNA1AO00555 2505 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 CLEC2BQ92478 149 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 LINC01548A6NM66 108 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 LGALS9O00182 355 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 IGF1P05019 195 aa15.99■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 CEP350Q5VT06 3117 aa15.98■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 SPANXCQ9NY87 97 aa15.98■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 DAND5Q8N907 189 aa15.98■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 Q8NA96 180 aa15.98■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 DSCAML1Q8TD84 2053 aa15.98■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 IGHV4-59P01825 116 aa15.97■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 IGHG2P01859 326 aa15.97■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 TRBV7-3A0A075B6L6 115 aa15.97■□□□□ 0.15
CHKB-CPT1B-203ENST00000492556 DEFB130BP0DP73 79 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms