RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 RHOHQ15669 191 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 WFDC10BQ8IUB3 73 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 OR10AG1Q8NH19 301 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 PCNPQ8WW12 178 aaKnown RBP4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 PHLDA3Q9Y5J5 127 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 TNFRSF18Q9Y5U5 241 aa4.89□□□□□ -1.63
PDLIM1-204ENST00000492511 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 K7EN84 100 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 OR5AL1P0C617 328 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 IGLC6P0CF74 106 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 GZMBP10144 247 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 TAGLN2P37802 199 aaKnown RBP4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 GNG4P50150 75 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 Q6ZRN7 208 aaPredicted RBP4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 ZFP82Q8N141 532 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 SYT8Q8NBV8 401 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 OCC1Q8TAD7 63 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 SMIM12Q96EX1 92 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 PRADC1Q9BSG0 188 aa4.88□□□□□ -1.63
PDLIM1-204ENST00000492511 GAGE12JA6NER3 117 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 DNAH10OSP0CZ25 163 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 LINC00315P59091 139 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 GAGE1Q13065 139 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 GAGE4Q13068 117 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 GAGE5Q13069 117 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 GAGE13Q4V321 117 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 TTC32Q5I0X7 151 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 SOHLH1Q5JUK2 328 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 FAM74A4Q5TZK3 123 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 SH2D6Q7Z4S9 175 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 OR2D3Q8NGH3 330 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 NUDT11Q96G61 164 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 KIF25-AS1Q9Y6Z4 181 aa4.87□□□□□ -1.63
PDLIM1-204ENST00000492511 FAT1Q14517 4588 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 TMEM250H0YL14 139 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 RHODO00212 210 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 BTF3P20290 206 aaKnown RBP4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 SSTP61278 116 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 TOR2AQ5JU69 321 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 TEX261Q6UWH6 196 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 ATP6V0E2Q8NHE4 81 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 DAZAP1Q96EP5 407 aaKnown RBP4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 FAM210AQ96ND0 272 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 RNASE7Q9H1E1 156 aaKnown RBP4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 GTSF1LQ9H1H1 148 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 MSRB1Q9NZV6 116 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 LY96Q9Y6Y9 160 aa4.86□□□□□ -1.63
PDLIM1-204ENST00000492511 C9JQL5 133 aa4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 NDUFS6O75380 124 aaKnown RBP4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 P01737 135 aa4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 SRP19P09132 144 aaKnown RBP4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 RPS20P60866 119 aaKnown RBP4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 RAB4BP61018 213 aa4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 LELP1Q5T871 98 aa4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 SPANXN1Q5VSR9 72 aa4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 LYZL1Q6UWQ5 148 aa4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 Q8N3U1 123 aa4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 FER1L6-AS1Q8NA97 138 aa4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 EIF5A2Q9GZV4 153 aaKnown RBP4.85□□□□□ -1.63
PDLIM1-204ENST00000492511 IGHV3-38A0A0C4DH36 116 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 TRBV10-1A0A0K0K1A3 114 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 EVI2AP22794 236 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 UBE2D3P61077 147 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 UBE2D2P62837 147 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 SRSF3P84103 164 aaKnown RBP4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 LINC01556Q5JQF7 62 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 OR10J3Q5JRS4 329 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 LCE2DQ5TA82 110 aaPredicted RBP4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 NEXN-AS1Q8NBZ9 246 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 OR10G8Q8NGN5 311 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 GTSF1Q8WW33 167 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 TPPP3Q9BW30 176 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 BIN3Q9NQY0 253 aa4.84□□□□□ -1.63
PDLIM1-204ENST00000492511 TRAV9-2A0A087WT02 112 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 TRAV8-6A0A0B4J262 113 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 IBA57-AS1B1ANH7 110 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 F2Z2F3 143 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 K7EP13 123 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 IGHV3-30P01768 117 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 IGHV3-33P01772 117 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 IGHV3-30-3P0DP02 117 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 IGHV3-30-5P0DP03 117 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 NTF3P20783 257 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 CTRLP40313 264 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 CEBPGP53567 150 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 CACNG7P62955 275 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 WDR73Q6P4I2 378 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 FAM231DQ6ZW35 169 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 CNFNQ9BYD5 112 aa4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 RPP21Q9H633 154 aaKnown RBP4.83□□□□□ -1.64
PDLIM1-204ENST00000492511 TRBV7-3A0A075B6L6 115 aa4.82□□□□□ -1.64
PDLIM1-204ENST00000492511 XKRY2A2RUG3 117 aa4.82□□□□□ -1.64
PDLIM1-204ENST00000492511 M0QY20 66 aa4.82□□□□□ -1.64
PDLIM1-204ENST00000492511 FOXA3P55318 350 aaPredicted RBP4.82□□□□□ -1.64
PDLIM1-204ENST00000492511 RPL36AP83881 106 aaKnown RBP4.82□□□□□ -1.64
PDLIM1-204ENST00000492511 ZNF56Q15929 161 aa4.82□□□□□ -1.64
PDLIM1-204ENST00000492511 LINC01551Q86U37 167 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms