RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 LYPD6BQ8NI32 183 aa10.86□□□□□ -0.67
PKP4-214ENST00000492496 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
PKP4-214ENST00000492496 BIN3Q9NQY0 253 aa10.86□□□□□ -0.67
PKP4-214ENST00000492496 HECTD4Q9Y4D8 3996 aa10.85□□□□□ -0.67
PKP4-214ENST00000492496 RAB19A4D1S5 217 aa10.85□□□□□ -0.67
PKP4-214ENST00000492496 CRYGDP07320 174 aa10.85□□□□□ -0.67
PKP4-214ENST00000492496 OR5AL1P0C617 328 aa10.85□□□□□ -0.67
PKP4-214ENST00000492496 LINC00694P0DN24 101 aa10.85□□□□□ -0.67
PKP4-214ENST00000492496 EVI2AP22794 236 aa10.85□□□□□ -0.67
PKP4-214ENST00000492496 NKX2-5P52952 324 aaPredicted RBP10.85□□□□□ -0.67
PKP4-214ENST00000492496 DAZAP1Q96EP5 407 aaKnown RBP10.85□□□□□ -0.67
PKP4-214ENST00000492496 GTSF1LQ9H1H1 148 aa10.85□□□□□ -0.67
PKP4-214ENST00000492496 DNAH2Q9P225 4427 aa10.84□□□□□ -0.67
PKP4-214ENST00000492496 TRAV8-6A0A0B4J262 113 aa10.84□□□□□ -0.67
PKP4-214ENST00000492496 C19orf71A6NCJ1 209 aa10.84□□□□□ -0.67
PKP4-214ENST00000492496 LELP1Q5T871 98 aa10.84□□□□□ -0.67
PKP4-214ENST00000492496 FAM74A4Q5TZK3 123 aa10.84□□□□□ -0.67
PKP4-214ENST00000492496 C14orf178Q8N769 122 aaPredicted RBP10.84□□□□□ -0.67
PKP4-214ENST00000492496 FAT2Q9NYQ8 4349 aa10.84□□□□□ -0.67
PKP4-214ENST00000492496 DNAH17Q9UFH2 4485 aa10.84□□□□□ -0.67
PKP4-214ENST00000492496 TRBV20OR9-2A0A075B6H5 130 aa10.83□□□□□ -0.68
PKP4-214ENST00000492496 A0A087WWL8 130 aa10.83□□□□□ -0.68
PKP4-214ENST00000492496 IGHV3-38A0A0C4DH36 116 aa10.83□□□□□ -0.68
PKP4-214ENST00000492496 RPS20P60866 119 aaKnown RBP10.83□□□□□ -0.68
PKP4-214ENST00000492496 NFE4Q86UQ8 179 aa10.83□□□□□ -0.68
PKP4-214ENST00000492496 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
PKP4-214ENST00000492496 OR10AG1Q8NH19 301 aa10.83□□□□□ -0.68
PKP4-214ENST00000492496 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 RBFOX3A6NFN3 312 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 GAGE1Q13065 139 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 GAGE4Q13068 117 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 GAGE5Q13069 117 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 LINC01556Q5JQF7 62 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 OR10J3Q5JRS4 329 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 SPANXN1Q5VSR9 72 aa10.82□□□□□ -0.68
PKP4-214ENST00000492496 Q6ZRN7 208 aaPredicted RBP10.82□□□□□ -0.68
PKP4-214ENST00000492496 TRBV10-1A0A0K0K1A3 114 aa10.81□□□□□ -0.68
PKP4-214ENST00000492496 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
PKP4-214ENST00000492496 TMEM250H0YL14 139 aa10.81□□□□□ -0.68
PKP4-214ENST00000492496 OR2D3Q8NGH3 330 aa10.81□□□□□ -0.68
PKP4-214ENST00000492496 P01737 135 aa10.8□□□□□ -0.68
PKP4-214ENST00000492496 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
PKP4-214ENST00000492496 RAB4BP61018 213 aa10.8□□□□□ -0.68
PKP4-214ENST00000492496 MSRB1Q9NZV6 116 aa10.8□□□□□ -0.68
PKP4-214ENST00000492496 Q9UF83 564 aa10.8□□□□□ -0.68
PKP4-214ENST00000492496 A0A087WWC5 75 aa10.79□□□□□ -0.68
PKP4-214ENST00000492496 NDUFS6O75380 124 aaKnown RBP10.79□□□□□ -0.68
PKP4-214ENST00000492496 FER1L6-AS1Q8NA97 138 aa10.79□□□□□ -0.68
PKP4-214ENST00000492496 MUC21A0A0G2JKD1 596 aa10.78□□□□□ -0.68
PKP4-214ENST00000492496 MUC21A0A140T8X8 626 aa10.78□□□□□ -0.68
PKP4-214ENST00000492496 F2Z2F3 143 aa10.78□□□□□ -0.68
PKP4-214ENST00000492496 GZMBP10144 247 aa10.78□□□□□ -0.68
PKP4-214ENST00000492496 RPL36AP83881 106 aaKnown RBP10.78□□□□□ -0.68
PKP4-214ENST00000492496 ZNF56Q15929 161 aa10.78□□□□□ -0.68
PKP4-214ENST00000492496 RPL36ALQ969Q0 106 aaKnown RBP10.78□□□□□ -0.68
PKP4-214ENST00000492496 TNFRSF18Q9Y5U5 241 aa10.78□□□□□ -0.68
PKP4-214ENST00000492496 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.69
PKP4-214ENST00000492496 CACNG7P62955 275 aa10.77□□□□□ -0.69
PKP4-214ENST00000492496 NUDT10Q8NFP7 164 aa10.77□□□□□ -0.69
PKP4-214ENST00000492496 OR10G8Q8NGN5 311 aa10.77□□□□□ -0.69
PKP4-214ENST00000492496 OCC1Q8TAD7 63 aa10.77□□□□□ -0.69
PKP4-214ENST00000492496 NUDT11Q96G61 164 aa10.77□□□□□ -0.69
PKP4-214ENST00000492496 AP1S3Q96PC3 154 aa10.77□□□□□ -0.69
PKP4-214ENST00000492496 IBA57-AS1B1ANH7 110 aa10.76□□□□□ -0.69
PKP4-214ENST00000492496 K7EN84 100 aa10.76□□□□□ -0.69
PKP4-214ENST00000492496 SMIM17P0DL12 118 aa10.76□□□□□ -0.69
PKP4-214ENST00000492496 UBE2D3P61077 147 aa10.76□□□□□ -0.69
PKP4-214ENST00000492496 UBE2D2P62837 147 aa10.76□□□□□ -0.69
PKP4-214ENST00000492496 FAM210AQ96ND0 272 aa10.76□□□□□ -0.69
PKP4-214ENST00000492496 TPPP3Q9BW30 176 aa10.76□□□□□ -0.69
PKP4-214ENST00000492496 KIF25-AS1Q9Y6Z4 181 aa10.76□□□□□ -0.69
PKP4-214ENST00000492496 C16orf90A8MZG2 172 aa10.75□□□□□ -0.69
PKP4-214ENST00000492496 ERVFC1-1P60608 527 aa10.75□□□□□ -0.69
PKP4-214ENST00000492496 SSTP61278 116 aa10.75□□□□□ -0.69
PKP4-214ENST00000492496 TOR2AQ5JU69 321 aa10.75□□□□□ -0.69
PKP4-214ENST00000492496 SPATA12Q7Z6I5 190 aa10.75□□□□□ -0.69
PKP4-214ENST00000492496 EIF5A2Q9GZV4 153 aaKnown RBP10.75□□□□□ -0.69
PKP4-214ENST00000492496 PKD1P98161 4303 aa10.75□□□□□ -0.69
PKP4-214ENST00000492496 F5H697 171 aa10.74□□□□□ -0.69
PKP4-214ENST00000492496 EREGO14944 169 aa10.74□□□□□ -0.69
PKP4-214ENST00000492496 IGHV3-30P01768 117 aa10.74□□□□□ -0.69
PKP4-214ENST00000492496 IGHV3-33P01772 117 aa10.74□□□□□ -0.69
PKP4-214ENST00000492496 IGHV3-30-3P0DP02 117 aa10.74□□□□□ -0.69
PKP4-214ENST00000492496 IGHV3-30-5P0DP03 117 aa10.74□□□□□ -0.69
PKP4-214ENST00000492496 LAGE3Q14657 143 aa10.74□□□□□ -0.69
PKP4-214ENST00000492496 WDR73Q6P4I2 378 aa10.74□□□□□ -0.69
PKP4-214ENST00000492496 RNASE7Q9H1E1 156 aaKnown RBP10.74□□□□□ -0.69
PKP4-214ENST00000492496 RPP21Q9H633 154 aaKnown RBP10.74□□□□□ -0.69
PKP4-214ENST00000492496 LYZL1Q6UWQ5 148 aa10.73□□□□□ -0.69
PKP4-214ENST00000492496 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
PKP4-214ENST00000492496 TRGC1P0CF51 173 aa10.72□□□□□ -0.69
PKP4-214ENST00000492496 CTRLP40313 264 aa10.72□□□□□ -0.69
PKP4-214ENST00000492496 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
PKP4-214ENST00000492496 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.72□□□□□ -0.69
PKP4-214ENST00000492496 PKHD1P08F94 4074 aa10.72□□□□□ -0.69
PKP4-214ENST00000492496 CEBPGP53567 150 aa10.71□□□□□ -0.69
PKP4-214ENST00000492496 TEX261Q6UWH6 196 aa10.71□□□□□ -0.69
PKP4-214ENST00000492496 SMIM7Q9BQ49 75 aa10.71□□□□□ -0.69
PKP4-214ENST00000492496 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms