RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SFRP2Q96HF1 295 aa10.1□□□□□ -0.79
COL2A1-207ENST00000490609 IGKV2D-24A0A075B6R9 120 aa10.09□□□□□ -0.79
COL2A1-207ENST00000490609 A0A087WWL8 130 aa10.09□□□□□ -0.79
COL2A1-207ENST00000490609 GRIFINA4D1Z8 144 aa10.09□□□□□ -0.79
COL2A1-207ENST00000490609 RBFOX3A6NFN3 312 aa10.09□□□□□ -0.79
COL2A1-207ENST00000490609 MBP02144 154 aa10.09□□□□□ -0.79
COL2A1-207ENST00000490609 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
COL2A1-207ENST00000490609 HNRNPA3P51991 378 aaKnown RBP10.09□□□□□ -0.79
COL2A1-207ENST00000490609 TOR2AQ5JU69 321 aa10.09□□□□□ -0.79
COL2A1-207ENST00000490609 RPL7L1Q6DKI1 246 aaKnown RBP10.09□□□□□ -0.79
COL2A1-207ENST00000490609 ENHOQ6UWT2 76 aa10.09□□□□□ -0.79
COL2A1-207ENST00000490609 ACTR3CQ9C0K3 210 aaPredicted RBP10.09□□□□□ -0.79
COL2A1-207ENST00000490609 COX11Q9Y6N1 276 aa10.09□□□□□ -0.79
COL2A1-207ENST00000490609 FAM74A7A6NL05 159 aa10.08□□□□□ -0.8
COL2A1-207ENST00000490609 M0R036 132 aa10.08□□□□□ -0.8
COL2A1-207ENST00000490609 PEX7O00628 323 aa10.08□□□□□ -0.8
COL2A1-207ENST00000490609 SH2D1AO60880 128 aa10.08□□□□□ -0.8
COL2A1-207ENST00000490609 UBE2G2P60604 165 aa10.08□□□□□ -0.8
COL2A1-207ENST00000490609 UBE2D3P61077 147 aa10.08□□□□□ -0.8
COL2A1-207ENST00000490609 UBE2D2P62837 147 aa10.08□□□□□ -0.8
COL2A1-207ENST00000490609 PTTG1O95997 202 aa10.07□□□□□ -0.8
COL2A1-207ENST00000490609 ZNF674Q2M3X9 581 aa10.07□□□□□ -0.8
COL2A1-207ENST00000490609 UBE2WQ96B02 151 aa10.07□□□□□ -0.8
COL2A1-207ENST00000490609 FAM74A4Q5TZK3 123 aa10.06□□□□□ -0.8
COL2A1-207ENST00000490609 CTXND1A0A1B0GTU2 59 aa10.05□□□□□ -0.8
COL2A1-207ENST00000490609 RHODO00212 210 aa10.05□□□□□ -0.8
COL2A1-207ENST00000490609 OXTP01178 125 aa10.05□□□□□ -0.8
COL2A1-207ENST00000490609 LINC01559Q495D7 138 aa10.05□□□□□ -0.8
COL2A1-207ENST00000490609 SERTAD4-AS1Q5TG53 156 aa10.05□□□□□ -0.8
COL2A1-207ENST00000490609 OR11H4Q8NGC9 324 aa10.05□□□□□ -0.8
COL2A1-207ENST00000490609 DAZAP1Q96EP5 407 aaKnown RBP10.05□□□□□ -0.8
COL2A1-207ENST00000490609 G3V3Q6 166 aa10.04□□□□□ -0.8
COL2A1-207ENST00000490609 IFNA7P01567 189 aa10.04□□□□□ -0.8
COL2A1-207ENST00000490609 IGLV2-8P01709 118 aa10.04□□□□□ -0.8
COL2A1-207ENST00000490609 KRTAP26-1Q6PEX3 210 aa10.04□□□□□ -0.8
COL2A1-207ENST00000490609 OR10G8Q8NGN5 311 aa10.04□□□□□ -0.8
COL2A1-207ENST00000490609 RMI2Q96E14 147 aa10.04□□□□□ -0.8
COL2A1-207ENST00000490609 CHCHD7Q9BUK0 85 aa10.04□□□□□ -0.8
COL2A1-207ENST00000490609 TRBV7-3A0A075B6L6 115 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 TMSB15BA0A087X1C1 80 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 TRBV10-1A0A0K0K1A3 114 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 PANO1I0J062 215 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 M0R381 172 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 FAM162BQ5T6X4 162 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 PRR27Q6MZM9 219 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 SYT8Q8NBV8 401 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 ZFP30Q9Y2G7 519 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 URGCP-MRPS24S4R325 110 aa10.03□□□□□ -0.8
COL2A1-207ENST00000490609 TRBV6-1A0A0K0K1D8 114 aa10.02□□□□□ -0.81
COL2A1-207ENST00000490609 LTAP01374 205 aa10.02□□□□□ -0.81
COL2A1-207ENST00000490609 MPV17L2Q567V2 206 aa10.02□□□□□ -0.81
COL2A1-207ENST00000490609 NTM-AS1Q6ZSK4 140 aa10.02□□□□□ -0.81
COL2A1-207ENST00000490609 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
COL2A1-207ENST00000490609 CYTL1Q9NRR1 136 aa10.02□□□□□ -0.81
COL2A1-207ENST00000490609 PHLDA3Q9Y5J5 127 aa10.02□□□□□ -0.81
COL2A1-207ENST00000490609 LRP2P98164 4655 aa10.02□□□□□ -0.81
COL2A1-207ENST00000490609 RNF213Q63HN8 5207 aa10.01□□□□□ -0.81
COL2A1-207ENST00000490609 A0A087WX48 190 aa10.01□□□□□ -0.81
COL2A1-207ENST00000490609 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
COL2A1-207ENST00000490609 PRSS1P07477 247 aa10.01□□□□□ -0.81
COL2A1-207ENST00000490609 RGS21Q2M5E4 152 aa10.01□□□□□ -0.81
COL2A1-207ENST00000490609 MT1HL1P0DM35 61 aa10□□□□□ -0.81
COL2A1-207ENST00000490609 TPT1P13693 172 aaKnown RBP10□□□□□ -0.81
COL2A1-207ENST00000490609 RPL19P84098 196 aaKnown RBP10□□□□□ -0.81
COL2A1-207ENST00000490609 Q0VG73 95 aa10□□□□□ -0.81
COL2A1-207ENST00000490609 FMC1Q96HJ9 113 aa10□□□□□ -0.81
COL2A1-207ENST00000490609 NKX6-2Q9C056 277 aaPredicted RBP10□□□□□ -0.81
COL2A1-207ENST00000490609 MED28Q9H204 178 aa10□□□□□ -0.81
COL2A1-207ENST00000490609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10□□□□□ -0.81
COL2A1-207ENST00000490609 USP17L23D6RBM5 183 aa9.99□□□□□ -0.81
COL2A1-207ENST00000490609 GIPP09681 153 aaPredicted RBP9.99□□□□□ -0.81
COL2A1-207ENST00000490609 SEC11BP0C7V7 166 aa9.99□□□□□ -0.81
COL2A1-207ENST00000490609 FHITP49789 147 aa9.99□□□□□ -0.81
COL2A1-207ENST00000490609 RPL36AP83881 106 aaKnown RBP9.99□□□□□ -0.81
COL2A1-207ENST00000490609 ELOBQ15370 118 aa9.99□□□□□ -0.81
COL2A1-207ENST00000490609 ZFP82Q8N141 532 aa9.99□□□□□ -0.81
COL2A1-207ENST00000490609 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
COL2A1-207ENST00000490609 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
COL2A1-207ENST00000490609 RPL36ALQ969Q0 106 aaKnown RBP9.99□□□□□ -0.81
COL2A1-207ENST00000490609 KIF25-AS1Q9Y6Z4 181 aa9.99□□□□□ -0.81
COL2A1-207ENST00000490609 RAB4BP61018 213 aa9.98□□□□□ -0.81
COL2A1-207ENST00000490609 MLST8Q9BVC4 326 aa9.98□□□□□ -0.81
COL2A1-207ENST00000490609 SSBP4Q9BWG4 385 aaPredicted RBP9.98□□□□□ -0.81
COL2A1-207ENST00000490609 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
COL2A1-207ENST00000490609 MAP1LC3B2A6NCE7 125 aa9.97□□□□□ -0.81
COL2A1-207ENST00000490609 TMEM262E9PQX1 116 aa9.97□□□□□ -0.81
COL2A1-207ENST00000490609 SDIM1Q6ZPB5 146 aa9.97□□□□□ -0.81
COL2A1-207ENST00000490609 C9orf163Q8N9P6 203 aa9.97□□□□□ -0.81
COL2A1-207ENST00000490609 C1orf43Q9BWL3 253 aa9.97□□□□□ -0.81
COL2A1-207ENST00000490609 MAP1LC3BQ9GZQ8 125 aa9.97□□□□□ -0.81
COL2A1-207ENST00000490609 FXYD6-FXYD2A0A087WZ82 144 aa9.96□□□□□ -0.82
COL2A1-207ENST00000490609 BORCS7-ASMTA0A0B4J1R7 106 aa9.96□□□□□ -0.82
COL2A1-207ENST00000490609 MUC21A0A0G2JKD1 596 aa9.96□□□□□ -0.82
COL2A1-207ENST00000490609 MUC21A0A140T8X8 626 aa9.96□□□□□ -0.82
COL2A1-207ENST00000490609 SNAI2O43623 268 aa9.96□□□□□ -0.82
COL2A1-207ENST00000490609 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.82
COL2A1-207ENST00000490609 INO80EQ8NBZ0 244 aaPredicted RBP9.96□□□□□ -0.82
COL2A1-207ENST00000490609 VAX2Q9UIW0 290 aa9.96□□□□□ -0.82
COL2A1-207ENST00000490609 ANGP03950 147 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms