RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 WFDC10BQ8IUB3 73 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 LINC00479Q96M42 142 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 SMIM7Q9BQ49 75 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 LY96Q9Y6Y9 160 aa6.57□□□□□ -1.36
TMEM39A-210ENST00000490099 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 LOC100131303A0A0U1RQF7 123 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 TMEM218A2RU14 115 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 PGPEP1LA6NFU8 196 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 ZNF727A8MUV8 499 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 F8W036 122 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 RPL35P42766 123 aaKnown RBP6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 GNG4P50150 75 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 CRIP1P50238 77 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 DNLZQ5SXM8 178 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 XP32Q5T750 250 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 PRNTQ86SH4 94 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 SLC7A5P1Q8MH63 180 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 Q8N1X5 172 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 SMIM12Q96EX1 92 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 SEC11CQ9BY50 192 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 PARLQ9H300 379 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 DNAH5Q8TE73 4624 aa6.56□□□□□ -1.36
TMEM39A-210ENST00000490099 A0A087WTM6 91 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 FABP5P3A8MUU1 101 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 EVI2AP22794 236 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 ZNF674Q2M3X9 581 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 LINC01556Q5JQF7 62 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 UFSP1Q6NVU6 142 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 ZFP2Q6ZN57 461 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 Q6ZSN1 163 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 BIN3Q9NQY0 253 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 MSRB1Q9NZV6 116 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 ZFP30Q9Y2G7 519 aa6.55□□□□□ -1.36
TMEM39A-210ENST00000490099 TRAV34A0A0B4J273 112 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 IBA57-AS1B1ANH7 110 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 C9JQL5 133 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 LINC00694P0DN24 101 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 MGST1P10620 155 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 PNRC1Q12796 327 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 TMEM241Q24JQ0 296 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 CENPWQ5EE01 88 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 Q86TA4 180 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 C10orf126Q8N4M7 172 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 DERL1Q9BUN8 251 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 IL36BQ9NZH7 164 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 NAT8Q9UHE5 227 aa6.54□□□□□ -1.36
TMEM39A-210ENST00000490099 IGHV3-38A0A0C4DH36 116 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 LTAP01374 205 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 CRYGDP07320 174 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 ERVFC1-1P60608 527 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 RHOHQ15669 191 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 BAGE2Q86Y30 109 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 MAPKAPK5-AS1Q8N8E1 139 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 PRADC1Q9BSG0 188 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 SCRT2Q9NQ03 307 aa6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 CARHSP1Q9Y2V2 147 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-210ENST00000490099 LRCOL1A6NCL2 159 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 A8MWV9 139 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 S100A1P23297 94 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 XGP55808 180 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 C10orf91Q5T1B1 145 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 LELP1Q5T871 98 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 SVBPQ8N300 66 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 ZC2HC1AQ96GY0 325 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 GTSF1LQ9H1H1 148 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 Q9UF83 564 aa6.52□□□□□ -1.37
TMEM39A-210ENST00000490099 TRAV8-6A0A0B4J262 113 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 B4DEV8 164 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 H3BS24 57 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 ATP6V1G1O75348 118 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 ADCYAP1P18509 176 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 KRTAP10-1P60331 282 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 ADIRFQ15847 76 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 NHLRC2Q8NBF2 726 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 ATP6V0E2Q8NHE4 81 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 SAMD10Q9BYL1 202 aa6.51□□□□□ -1.37
TMEM39A-210ENST00000490099 TRBV20OR9-2A0A075B6H5 130 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 IGHV3-73A0A0B4J1V6 119 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 M0R036 132 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 SH2D1AO60880 128 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 SNAPINO95295 136 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 APOC3P02656 99 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 ASIPP42127 132 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 FAM162BQ5T6X4 162 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 LINC01551Q86U37 167 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 DAZAP1Q96EP5 407 aaKnown RBP6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 MLST8Q9BVC4 326 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 JPT2Q9H910 190 aa6.5□□□□□ -1.37
TMEM39A-210ENST00000490099 PPP1R2P9O14990 202 aa6.49□□□□□ -1.37
TMEM39A-210ENST00000490099 ARMS2P0C7Q2 107 aa6.49□□□□□ -1.37
TMEM39A-210ENST00000490099 S100A4P26447 101 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-210ENST00000490099 RPL23P62829 140 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-210ENST00000490099 LAGE3Q14657 143 aa6.49□□□□□ -1.37
TMEM39A-210ENST00000490099 RHEBQ15382 184 aa6.49□□□□□ -1.37
TMEM39A-210ENST00000490099 C15orf54Q8N8G6 183 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms