RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 MLST8Q9BVC4 326 aa7.98□□□□□ -1.13
SEMA6C-208ENST00000489944 ZNF471Q9BX82 626 aaPredicted RBP7.98□□□□□ -1.13
SEMA6C-208ENST00000489944 MANBALQ9NQG1 85 aa7.98□□□□□ -1.13
SEMA6C-208ENST00000489944 ABCA13Q86UQ4 5058 aa7.98□□□□□ -1.13
SEMA6C-208ENST00000489944 IGHV3-73A0A0B4J1V6 119 aa7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 TRAV1-1A0A0B4J248 108 aa7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 LRCOL1A6NCL2 159 aa7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 H2AFB1P0C5Y9 115 aa7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 GCSHP23434 173 aa7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 RPL36AP83881 106 aaKnown RBP7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 FAM213BQ8TBF2 198 aa7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 RPL36ALQ969Q0 106 aaKnown RBP7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 TNFRSF18Q9Y5U5 241 aa7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 URGCP-MRPS24S4R325 110 aa7.97□□□□□ -1.13
SEMA6C-208ENST00000489944 APOBP04114 4563 aaKnown RBP7.96□□□□□ -1.13
SEMA6C-208ENST00000489944 M0R036 132 aa7.96□□□□□ -1.14
SEMA6C-208ENST00000489944 RAB4BP61018 213 aa7.96□□□□□ -1.14
SEMA6C-208ENST00000489944 TMEM97Q5BJF2 176 aa7.96□□□□□ -1.14
SEMA6C-208ENST00000489944 BAGE2Q86Y30 109 aa7.96□□□□□ -1.14
SEMA6C-208ENST00000489944 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.14
SEMA6C-208ENST00000489944 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 GAGE12JA6NER3 117 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 EPM2AB3EWF7 344 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 OR5AL1P0C617 328 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 TAGLN2P37802 199 aaKnown RBP7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 GAGE1Q13065 139 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 GAGE4Q13068 117 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 GAGE5Q13069 117 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 GAGE13Q4V321 117 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 KCNIP4Q6PIL6 250 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 Q6ZSN1 163 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 Q8N814 137 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 C11orf52Q96A22 123 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 SSBP4Q9BWG4 385 aaPredicted RBP7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 BIN3Q9NQY0 253 aa7.95□□□□□ -1.14
SEMA6C-208ENST00000489944 IGLV5-52A0A0A0MRZ9 124 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 SNAI2O43623 268 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 IGHV3-30P01768 117 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 IGHV3-33P01772 117 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 IGHV3-30-3P0DP02 117 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 IGHV3-30-5P0DP03 117 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 TMUB2Q71RG4 321 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 FRZBQ92765 325 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 SAMD10Q9BYL1 202 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
SEMA6C-208ENST00000489944 GRIFINA4D1Z8 144 aa7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 M0R381 172 aa7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 PDE6DO43924 150 aa7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 RPS20P60866 119 aaKnown RBP7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 UBE2D3P61077 147 aa7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 UBE2D2P62837 147 aa7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 Q0VG73 95 aa7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 FAM74A4Q5TZK3 123 aa7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 NIT1Q86X76 327 aa7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 C14orf178Q8N769 122 aaPredicted RBP7.93□□□□□ -1.14
SEMA6C-208ENST00000489944 A0A087WX48 190 aa7.92□□□□□ -1.14
SEMA6C-208ENST00000489944 SCO2A0A1W2PP80 73 aa7.92□□□□□ -1.14
SEMA6C-208ENST00000489944 XKRY2A2RUG3 117 aa7.92□□□□□ -1.14
SEMA6C-208ENST00000489944 IFNA1P01562 189 aa7.92□□□□□ -1.14
SEMA6C-208ENST00000489944 XGP55808 180 aa7.92□□□□□ -1.14
SEMA6C-208ENST00000489944 PRR27Q6MZM9 219 aa7.92□□□□□ -1.14
SEMA6C-208ENST00000489944 JPT2Q9H910 190 aa7.92□□□□□ -1.14
SEMA6C-208ENST00000489944 Q9HAA7 133 aa7.92□□□□□ -1.14
SEMA6C-208ENST00000489944 SMLR1H3BR10 107 aa7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 RPL35P42766 123 aaKnown RBP7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 KRTAP10-1P60331 282 aa7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 SPANXN1Q5VSR9 72 aa7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 ATRAIDQ6UW56 229 aa7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 DAZ4Q86SG3 579 aaKnown RBP7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 TCTE3Q8IZS6 198 aa7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 Q8N976 141 aa7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 DAZ3Q9NR90 486 aaKnown RBP7.91□□□□□ -1.14
SEMA6C-208ENST00000489944 A0A087WWL8 130 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 TMSB15BA0A087X1C1 80 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 TRBV6-8A0A0A6YYG3 113 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 RBFOX3A6NFN3 312 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 F2Z2F3 143 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 H7C1H1 209 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 SMIM17P0DL12 118 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 SULT1A2P50226 295 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 CCL20P78556 96 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 C14orf177Q52M58 125 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 SLC51BQ86UW2 128 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 DAZAP1Q96EP5 407 aaKnown RBP7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 AP1S3Q96PC3 154 aa7.9□□□□□ -1.14
SEMA6C-208ENST00000489944 CACNG7P62955 275 aa7.89□□□□□ -1.15
SEMA6C-208ENST00000489944 MEF2BQ02080 365 aaPredicted RBP7.89□□□□□ -1.15
SEMA6C-208ENST00000489944 OR10AG1Q8NH19 301 aa7.89□□□□□ -1.15
SEMA6C-208ENST00000489944 DNAJC30Q96LL9 226 aa7.89□□□□□ -1.15
SEMA6C-208ENST00000489944 GNG13Q9P2W3 67 aa7.89□□□□□ -1.15
SEMA6C-208ENST00000489944 VAX2Q9UIW0 290 aa7.89□□□□□ -1.15
SEMA6C-208ENST00000489944 GNG4P50150 75 aa7.88□□□□□ -1.15
SEMA6C-208ENST00000489944 ZNF56Q15929 161 aa7.88□□□□□ -1.15
SEMA6C-208ENST00000489944 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
SEMA6C-208ENST00000489944 NEXN-AS1Q8NBZ9 246 aa7.87□□□□□ -1.15
SEMA6C-208ENST00000489944 Q9UF83 564 aa7.87□□□□□ -1.15
SEMA6C-208ENST00000489944 A0A1B0GV50 99 aa7.86□□□□□ -1.15
SEMA6C-208ENST00000489944 C19orf71A6NCJ1 209 aa7.86□□□□□ -1.15
SEMA6C-208ENST00000489944 F5H697 171 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms