RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 C5orf52A6NGY3 159 aa15.58■□□□□ 0.09
SMC4-221ENST00000489573 SMKR1H3BMG3 65 aa15.58■□□□□ 0.09
SMC4-221ENST00000489573 NCR2O95944 276 aa15.58■□□□□ 0.09
SMC4-221ENST00000489573 Q6ZWC4 215 aa15.58■□□□□ 0.09
SMC4-221ENST00000489573 MRAP2Q96G30 205 aa15.58■□□□□ 0.09
SMC4-221ENST00000489573 PRELID3AQ96N28 172 aa15.58■□□□□ 0.09
SMC4-221ENST00000489573 NDUFAF3Q9BU61 184 aa15.58■□□□□ 0.09
SMC4-221ENST00000489573 DAZ2Q13117 558 aaKnown RBP15.58■□□□□ 0.08
SMC4-221ENST00000489573 IQCJQ1A5X6 159 aa15.58■□□□□ 0.08
SMC4-221ENST00000489573 BAGE3Q86Y29 109 aa15.58■□□□□ 0.08
SMC4-221ENST00000489573 RASL10AQ92737 203 aa15.58■□□□□ 0.08
SMC4-221ENST00000489573 SAMD10Q9BYL1 202 aa15.58■□□□□ 0.08
SMC4-221ENST00000489573 A8MWV9 139 aa15.57■□□□□ 0.08
SMC4-221ENST00000489573 CRYGDP07320 174 aa15.57■□□□□ 0.08
SMC4-221ENST00000489573 LINC00315P59091 139 aa15.57■□□□□ 0.08
SMC4-221ENST00000489573 POM121L12Q8N7R1 296 aa15.57■□□□□ 0.08
SMC4-221ENST00000489573 CMYA5Q8N3K9 4069 aa15.57■□□□□ 0.08
SMC4-221ENST00000489573 FAM74A4Q5TZK3 123 aa15.56■□□□□ 0.08
SMC4-221ENST00000489573 RNF183Q96D59 192 aa15.56■□□□□ 0.08
SMC4-221ENST00000489573 NOP10Q9NPE3 64 aaKnown RBP15.56■□□□□ 0.08
SMC4-221ENST00000489573 TRGV1A0A0A0MS02 117 aa15.55■□□□□ 0.08
SMC4-221ENST00000489573 TRAV26-2A0A0B4J265 109 aa15.55■□□□□ 0.08
SMC4-221ENST00000489573 LGALS9BQ3B8N2 356 aa15.55■□□□□ 0.08
SMC4-221ENST00000489573 OR11H2Q8NH07 326 aa15.55■□□□□ 0.08
SMC4-221ENST00000489573 OVOL2Q9BRP0 275 aa15.55■□□□□ 0.08
SMC4-221ENST00000489573 LAMTOR2Q9Y2Q5 125 aa15.55■□□□□ 0.08
SMC4-221ENST00000489573 GAS8-AS1O95177 125 aa15.54■□□□□ 0.08
SMC4-221ENST00000489573 NPYP01303 97 aa15.54■□□□□ 0.08
SMC4-221ENST00000489573 HOXA5P20719 270 aa15.54■□□□□ 0.08
SMC4-221ENST00000489573 F5H697 171 aa15.53■□□□□ 0.08
SMC4-221ENST00000489573 GATA1P15976 413 aaPredicted RBP15.53■□□□□ 0.08
SMC4-221ENST00000489573 ZNF56Q15929 161 aa15.53■□□□□ 0.08
SMC4-221ENST00000489573 CFAP126Q5VTH2 177 aa15.53■□□□□ 0.08
SMC4-221ENST00000489573 Q6ZTI0 123 aa15.53■□□□□ 0.08
SMC4-221ENST00000489573 RS1O15537 224 aa15.52■□□□□ 0.07
SMC4-221ENST00000489573 SERF1AO75920 110 aa15.52■□□□□ 0.07
SMC4-221ENST00000489573 TNFRSF6BO95407 300 aa15.52■□□□□ 0.07
SMC4-221ENST00000489573 LINC00310P59036 64 aa15.52■□□□□ 0.07
SMC4-221ENST00000489573 RHODO00212 210 aa15.51■□□□□ 0.07
SMC4-221ENST00000489573 PRB2P02812 416 aaPredicted RBP15.51■□□□□ 0.07
SMC4-221ENST00000489573 EMP1P54849 157 aa15.51■□□□□ 0.07
SMC4-221ENST00000489573 SUMO4Q6EEV6 95 aa15.51■□□□□ 0.07
SMC4-221ENST00000489573 UFSP1Q6NVU6 142 aa15.51■□□□□ 0.07
SMC4-221ENST00000489573 NRACQ8N912 160 aa15.51■□□□□ 0.07
SMC4-221ENST00000489573 LOC105371267A0A1B0GV96 52 aa15.5■□□□□ 0.07
SMC4-221ENST00000489573 MIFP14174 115 aa15.5■□□□□ 0.07
SMC4-221ENST00000489573 HIST3H2BBQ8N257 126 aa15.5■□□□□ 0.07
SMC4-221ENST00000489573 K7EIL1 84 aa15.49■□□□□ 0.07
SMC4-221ENST00000489573 PDZD11Q5EBL8 140 aa15.49■□□□□ 0.07
SMC4-221ENST00000489573 MAP1LC3AQ9H492 121 aa15.49■□□□□ 0.07
SMC4-221ENST00000489573 TP53TG1Q9Y2A0 90 aa15.49■□□□□ 0.07
SMC4-221ENST00000489573 PKD1L1Q8TDX9 2849 aa15.49■□□□□ 0.07
SMC4-221ENST00000489573 NUPR1O60356 82 aa15.49■□□□□ 0.07
SMC4-221ENST00000489573 ESDP10768 282 aa15.49■□□□□ 0.07
SMC4-221ENST00000489573 IGHV3-73A0A0B4J1V6 119 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 TRAV4A0A0B4J268 109 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 IGHV4-28A0A0C4DH34 117 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 GAGE12BA1L429 117 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 GAGE7O76087 117 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 PPP1R17O96001 155 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 GAGE12FP0CL80 117 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 GAGE12GP0CL81 117 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 GAGE12IP0CL82 117 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 RNASEKQ6P5S7 137 aaKnown RBP15.48■□□□□ 0.07
SMC4-221ENST00000489573 NIT1Q86X76 327 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 OR4C5Q8NGB2 326 aa15.48■□□□□ 0.07
SMC4-221ENST00000489573 LOC389332A0A1B0GUA5 103 aa15.47■□□□□ 0.07
SMC4-221ENST00000489573 ZFP2Q6ZN57 461 aa15.47■□□□□ 0.07
SMC4-221ENST00000489573 Q8NAQ8 132 aa15.47■□□□□ 0.07
SMC4-221ENST00000489573 PRSS3P2Q8NHM4 247 aa15.47■□□□□ 0.07
SMC4-221ENST00000489573 RPL39LQ96EH5 51 aaKnown RBP15.47■□□□□ 0.07
SMC4-221ENST00000489573 URB1-AS1Q96HZ7 61 aa15.47■□□□□ 0.07
SMC4-221ENST00000489573 S100A2P29034 98 aa15.46■□□□□ 0.07
SMC4-221ENST00000489573 TRGV2A0A075B6R0 118 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 M0QY20 66 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 FA2HQ7L5A8 372 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 CHCHD1Q96BP2 118 aaKnown RBP15.45■□□□□ 0.06
SMC4-221ENST00000489573 EDA2RQ9HAV5 297 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 PRSS47A8MTI9 375 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 H7C1H1 209 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 LINC00614P0C842 121 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 IFI27P40305 119 aaPredicted RBP15.45■□□□□ 0.06
SMC4-221ENST00000489573 LINC00612Q8N6U2 182 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 C20orf78Q9BR46 151 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 RETNQ9HD89 108 aa15.45■□□□□ 0.06
SMC4-221ENST00000489573 IFITM10A6NMD0 228 aa15.44■□□□□ 0.06
SMC4-221ENST00000489573 LYRM9A8MSI8 78 aa15.44■□□□□ 0.06
SMC4-221ENST00000489573 ZNF479Q96JC4 524 aa15.44■□□□□ 0.06
SMC4-221ENST00000489573 HSBP1O75506 76 aa15.43■□□□□ 0.06
SMC4-221ENST00000489573 IGHV3-53P01767 116 aa15.43■□□□□ 0.06
SMC4-221ENST00000489573 SUMO2P61956 95 aaKnown RBP15.43■□□□□ 0.06
SMC4-221ENST00000489573 NXT2Q9NPJ8 142 aaKnown RBP15.43■□□□□ 0.06
SMC4-221ENST00000489573 DNAH3Q8TD57 4116 aa15.43■□□□□ 0.06
SMC4-221ENST00000489573 DEFB4AO15263 64 aa15.42■□□□□ 0.06
SMC4-221ENST00000489573 CIDEAO60543 219 aa15.42■□□□□ 0.06
SMC4-221ENST00000489573 FAM222AQ5U5X8 452 aa15.42■□□□□ 0.06
SMC4-221ENST00000489573 NACAE9PAV3 2078 aa15.42■□□□□ 0.06
SMC4-221ENST00000489573 PMCHP20382 165 aa15.41■□□□□ 0.06
SMC4-221ENST00000489573 DEFB121Q5J5C9 76 aa15.41■□□□□ 0.06
SMC4-221ENST00000489573 TMEM18Q96B42 140 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms